Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003285g0090 Nicotiana tabacum HOM05D000329 ORTHO05D005330 8.4e-285 983.0 502 100.0
Sopen12g010860 Solanum pennellii HOM05D000329 ORTHO05D005330 4.1e-207 724.9 515 77.7
Peaxi162Scf00304g10137 Petunia axillaris HOM05D000329 ORTHO05D005330 3.5e-206 721.8 514 75.5
Solyc12g027580.3 Solanum lycopersicum HOM05D000329 ORTHO05D005330 6.6e-205 717.6 515 76.7
Actinidia39997 Actinidia chinensis HOM05D000329 ORTHO05D005330 3.1e-170 602.4 514 63.0
Cc02_g08850 Coffea canephora HOM05D000329 ORTHO05D005330 2.0e-169 599.7 514 63.2
GSVIVG01023507001 Vitis vinifera HOM05D000329 ORTHO05D005330 4.5e-169 598.6 516 62.8
Oeu014525.1 Olea europaea HOM05D000329 ORTHO05D005330 5.5e-167 591.7 516 62.6
QL03p030502 Quercus lobata HOM05D000329 ORTHO05D005330 1.8e-165 586.6 515 61.6
Migut.F01542 Erythranthe guttata HOM05D000329 ORTHO05D005330 3.0e-165 585.9 516 61.0
SGA_v2.0_scaffold50G18503 Striga asiatica HOM05D000329 ORTHO05D005330 8.7e-165 584.3 516 61.4
Manes.09G147900 Manihot esculenta HOM05D000329 ORTHO05D005330 1.1e-164 583.9 516 61.8
FAN14G2464 Fragaria x ananassa HOM05D000329 ORTHO05D005330 4.8e-163 578.6 490 63.5
Eucgr.H04230 Eucalyptus grandis HOM05D000329 ORTHO05D005330 4.0e-162 575.5 516 60.9
Atru.chr2.977 Acer truncatum HOM05D000329 ORTHO05D005330 5.3e-162 575.1 514 60.7
TWI56G0006 Tripterygium wilfordii HOM05D000329 ORTHO05D005330 1.5e-161 573.5 516 60.1
MD04G1230100 Malus domestica HOM05D000329 ORTHO05D005330 7.6e-161 571.2 516 60.3
MSTRG.316 Avicennia marina HOM05D000329 ORTHO05D005330 1.0e-160 570.9 516 59.9
Potri.019G019100 Populus trichocarpa HOM05D000329 ORTHO05D005330 1.3e-160 570.5 514 61.9
Sabra19G0031800 Salix brachista HOM05D000329 ORTHO05D005330 3.8e-160 568.9 514 61.7
FAN05G0322 Fragaria x ananassa HOM05D000329 ORTHO05D005330 1.1e-159 567.4 516 60.3
RcHm_v2.0_Chr3g0449631 Rosa chinensis HOM05D000329 ORTHO05D005330 1.1e-159 567.4 516 60.5
COL.COLO4_15478 Corchorus olitorius HOM05D000329 ORTHO05D005330 1.9e-159 566.6 516 60.5
FvH4_6g01900 Fragaria vesca HOM05D000329 ORTHO05D005330 1.9e-159 566.6 516 60.5
FAN14G5238 Fragaria x ananassa HOM05D000329 ORTHO05D005330 5.5e-159 565.1 516 60.3
Thecc.05G271000 Theobroma cacao HOM05D000329 ORTHO05D005330 5.5e-159 565.1 516 60.3
FAN09G2051 Fragaria x ananassa HOM05D000329 ORTHO05D005330 7.1e-159 564.7 516 60.3
Ciclev10018568m.g Citrus clementina HOM05D000329 ORTHO05D005330 2.1e-158 563.1 514 59.9
TAR636G0200 Trochodendron aralioides HOM05D000329 ORTHO05D005330 1.3e-157 560.5 512 59.6
Duzib106G0267 Durio zibethinus HOM05D000329 ORTHO05D005330 1.8e-157 560.1 516 59.9
AT3G04490 Arabidopsis thaliana HOM05D000329 ORTHO05D005330 2.3e-157 559.7 511 59.1
A05p42990 Brassica napus HOM05D000329 ORTHO05D005330 2.3e-157 559.7 511 59.5
C05p62760 Brassica napus HOM05D000329 ORTHO05D005330 5.1e-157 558.5 511 59.3
BolC5t34929H Brassica oleracea HOM05D000329 ORTHO05D005330 5.1e-157 558.5 511 59.3
Ca_09463_v3 Cicer arietinum L. HOM05D000329 ORTHO05D005330 5.1e-157 558.5 516 58.3
THA.LOC104827286 Tarenaya hassleriana HOM05D000329 ORTHO05D005330 8.7e-157 557.8 511 58.7
BraA05t23043Z Brassica rapa HOM05D000329 ORTHO05D005330 1.1e-156 557.4 511 59.3
Glyma.03G251100 Glycine max HOM05D000329 ORTHO05D005330 1.1e-156 557.4 516 58.1
AL3G14470 Arabidopsis lyrata HOM05D000329 ORTHO05D005330 1.9e-156 556.6 511 58.7
Lj1g0020261 Lotus japonicus HOM05D000329 ORTHO05D005330 2.5e-156 556.2 516 58.5
BcaC05g30221 Brassica carinata HOM05D000329 ORTHO05D005330 7.4e-156 554.7 511 58.7
Glyma.19G248400 Glycine max HOM05D000329 ORTHO05D005330 9.7e-156 554.3 516 57.9
SalBow6G5354 Salvia bowleyana HOM05D000329 ORTHO05D005330 9.7e-156 554.3 491 61.3
TPR.G6911 Trifolium pratense HOM05D000329 ORTHO05D005330 9.7e-156 554.3 516 58.1
Carub.0003s0365 Capsella rubella HOM05D000329 ORTHO05D005330 1.6e-155 553.5 511 58.3
Lalb_Chr18g0044041 Lupinus albus HOM05D000329 ORTHO05D005330 1.6e-155 553.5 513 58.1
Sp3g03340 Schrenkiella parvula HOM05D000329 ORTHO05D005330 3.7e-155 552.4 511 58.3
CARHR078650 Cardamine hirsuta HOM05D000329 ORTHO05D005330 1.4e-154 550.4 511 57.9
Phvul.006G105600 Phaseolus vulgaris HOM05D000329 ORTHO05D005330 1.8e-154 550.1 516 57.6
Gohir.A08G217300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 2.4e-154 549.7 519 59.9
PGR004G1157 Punica granatum HOM05D000329 ORTHO05D005330 2.4e-154 549.7 513 58.7
Gorai.004G249100 Gossypium raimondii HOM05D000329 ORTHO05D005330 3.1e-154 549.3 519 59.9
Hma1.2p1_1512F.1_g287930 Hydrangea macrophylla HOM05D000329 ORTHO05D005330 9.0e-154 547.7 491 60.9
VMungo0540G0180 Vigna mungo HOM05D000329 ORTHO05D005330 1.2e-153 547.4 516 57.2
Nn1g02807 Nelumbo nucifera HOM05D000329 ORTHO05D005330 2.0e-153 546.6 516 59.5
Cfa006349 Carpinus fangiana HOM05D000329 ORTHO05D005330 1.7e-152 543.5 513 60.2
BcaC05g29938 Brassica carinata HOM05D000329 ORTHO05D005330 2.9e-152 542.7 511 58.5
arahy.Tifrunner.gnm1.ann1.LXR25M Arachis hypogaea HOM05D000329 ORTHO05D005330 3.8e-152 542.3 516 57.6
BcaC05g30194 Brassica carinata HOM05D000329 ORTHO05D005330 3.8e-152 542.3 511 58.1
PSO063G2047 Papaver somniferum HOM05D000329 ORTHO05D005330 2.5e-151 539.7 514 57.8
PSO017G0764 Papaver somniferum HOM05D000329 ORTHO05D005330 7.2e-151 538.1 514 57.8
Aa31LG5G14930 Aethionema arabicum HOM05D000329 ORTHO05D005330 2.7e-150 536.2 511 57.1
CiPaw.08G118500 Carya illinoinensis HOM05D000329 ORTHO05D005330 3.6e-150 535.8 501 59.1
Duzib177G0982 Durio zibethinus HOM05D000329 ORTHO05D005330 4.6e-150 535.4 491 60.3
Cpa.g.sc162.46 Carica papaya HOM05D000329 ORTHO05D005330 2.3e-149 533.1 488 59.6
Dinv06015 Davidia involucrata HOM05D000329 ORTHO05D005330 5.1e-149 531.9 453 64.0
CANSAT54G2567 Cannabis sativa HOM05D000329 ORTHO05D005330 1.1e-148 530.8 513 56.5
vmacro19990 Vaccinium macrocarpon HOM05D000329 ORTHO05D005330 3.3e-148 529.3 521 58.0
Ah.06g191840 Amaranthus hybridus HOM05D000329 ORTHO05D005330 8.2e-147 524.6 514 57.0
CAN.G155.4 Capsicum annuum HOM05D000329 ORTHO05D005330 8.2e-147 524.6 334 83.5
Lsat_1_v5_gn_2_16061 Lactuca sativa HOM05D000329 ORTHO05D005330 8.2e-147 524.6 516 54.8
FAN05G4177 Fragaria x ananassa HOM05D000329 ORTHO05D005330 3.1e-146 522.7 485 59.2
ECA238G1533 Erigeron canadensis HOM05D000329 ORTHO05D005330 4.5e-145 518.8 514 54.7
MELO3C010156.2 Cucumis melo HOM05D000329 ORTHO05D005330 5.9e-145 518.5 518 56.2
CsaV3_1G045290 Cucumis sativus L. HOM05D000329 ORTHO05D005330 7.7e-145 518.1 517 56.1
HanXRQChr13g0397671 Helianthus annuus HOM05D000329 ORTHO05D005330 2.9e-144 516.2 514 53.7
Lj2C42G9 Lonicera japonica HOM05D000329 ORTHO05D005330 7.2e-143 511.5 514 57.2
Aqoxy2G03671 Aquilegia oxysepala HOM05D000329 ORTHO05D005330 1.6e-142 510.4 512 55.3
AUR62040926 Chenopodium quinoa HOM05D000329 ORTHO05D005330 2.3e-141 506.5 513 56.1
Medtr7g115710 Medicago truncatula HOM05D000329 ORTHO05D005330 8.2e-139 498.0 500 55.4
Sed0007400 Sechium edule HOM05D000329 ORTHO05D005330 4.1e-138 495.7 515 54.2
Atru.chr2.952 Acer truncatum HOM05D000329 ORTHO05D005330 4.5e-137 492.3 453 58.9
AUR62004837 Chenopodium quinoa HOM05D000329 ORTHO05D005330 7.7e-137 491.5 513 54.6
ATR0736G139 Amborella trichopoda HOM05D000329 ORTHO05D005330 4.2e-135 485.7 518 52.1
ClCG06G009520 Citrullus lanatus HOM05D000329 ORTHO05D005330 3.6e-134 482.6 495 54.5
EL10Ac4g09016 Beta vulgaris HOM05D000329 ORTHO05D005330 5.7e-132 475.3 402 63.2
Hma1.2p1_1512F.1_g287950 Hydrangea macrophylla HOM05D000329 ORTHO05D005330 9.7e-132 474.6 530 52.5
Prupe.7G018700 Prunus persica HOM05D000329 ORTHO05D005330 1.3e-131 474.2 516 53.1
Psat3g006480 Pisum sativum HOM05D000329 ORTHO05D005330 1.2e-129 467.6 453 56.7
Thhalv10019943m.g Eutrema salsugineum HOM05D000329 ORTHO05D005330 7.5e-124 448.4 511 50.9
Gohir.D08G234300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 2.4e-122 443.4 519 52.0
unitig_46.g18343 Utricularia gibba HOM05D000329 ORTHO05D005330 7.7e-121 438.3 565 45.5
Os10g0477000 Oryza sativa ssp. japonica HOM05D000329 ORTHO05D005330 6.5e-120 435.3 520 47.3
CSS0019027 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 2.1e-118 430.3 457 54.7
Zm00001eb045870 Zea mays HOM05D000329 ORTHO05D005330 2.1e-118 430.3 511 47.2
DCAR_000980 Daucus carota HOM05D000329 ORTHO05D005330 9.1e-114 414.8 381 59.8
Nitab4.5_0000432g0090 Nicotiana tabacum HOM05D000329 ORTHO05D005330 1.2e-113 414.5 254 86.6
Mapoly0091s0014 Marchantia polymorpha HOM05D000329 ORTHO05D005330 2.7e-113 413.3 511 45.4
Pp3c6_27570 Physcomitrium patens HOM05D000329 ORTHO05D005330 3.3e-111 406.4 507 44.8
Nitab4.5_0025717g0010 Nicotiana tabacum HOM05D000329 ORTHO05D005330 8.9e-109 398.3 249 83.1
Sc09g0004230 Simmondsia chinensis HOM05D000329 ORTHO05D005330 3.2e-98 363.2 359 56.3
SMO356G0150 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 8.6e-96 355.1 519 42.4
AagrBONN_evm.TU.Sc2ySwM_228.3774 Anthoceros agrestis HOM05D000329 ORTHO05D005330 1.1e-95 354.8 450 45.1
HPP92_025585 Vanilla planifolia HOM05D000329 ORTHO05D005330 2.0e-92 344.0 489 42.7
CBR_g8586 Chara braunii HOM05D000329 ORTHO05D005330 2.7e-89 333.6 521 39.9
CDE08G1568 Ceratophyllum demersum HOM05D000329 ORTHO05D005330 7.8e-89 332.0 422 45.3
Haze_04433 Corylus avellana HOM05D000329 ORTHO05D005330 4.7e-86 322.8 274 65.7
Pp3c16_19950 Physcomitrium patens HOM05D000329 ORTHO05D005330 4.0e-85 319.7 350 48.0
Pp3c16_19964 Physcomitrium patens HOM05D000329 ORTHO05D005330 4.0e-85 319.7 350 48.0
Sabra19G0028500 Salix brachista HOM05D000329 ORTHO05D000833 3.2e-82 310.1 270 63.7
Nitab4.5_0000432g0110 Nicotiana tabacum HOM05D000329 ORTHO05D005330 1.7e-75 287.7 161 93.2
MBI10_g44932_MAGBIO Magnolia biondii HOM05D000329 ORTHO05D005330 2.2e-75 287.3 467 41.3
HPP92_025571 Vanilla planifolia HOM05D000329 ORTHO05D005330 1.2e-65 255.0 323 46.7
arahy.Tifrunner.gnm1.ann1.I5XT77 Arachis hypogaea HOM05D000329 ORTHO05D005330 1.8e-61 241.1 267 53.6
CSS0000359 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 1.7e-51 208.0 211 54.0
SEGI_29711 Sequoiadendron giganteum HOM05D000329 ORTHO05D005330 5.5e-50 203.0 259 45.6
HPP92_025621 Vanilla planifolia HOM05D000329 ORTHO05D005330 1.1e-47 195.3 252 46.0
Haze_04432 Corylus avellana HOM05D000329 ORTHO05D005330 1.9e-42 177.9 197 49.7
SMO002G0004 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 1.6e-41 174.9 392 33.4
HanXRQChr14g0434591 Helianthus annuus HOM05D000329 ORTHO05D005330 5.0e-35 153.3 178 48.9
BcaB04g19325 Brassica carinata HOM05D000329 ORTHO05D005330 3.3e-31 140.6 174 47.7
Solyc12g027560.1 Solanum lycopersicum HOM05D000329 ORTHO05D005330 5.0e-27 126.7 79 81.0
Haze_05933 Corylus avellana HOM05D000329 ORTHO05D005330 3.9e-24 117.1 83 71.1
Rhsim10G0071600 Rhododendron simsii HOM05D000329 ORTHO05D005330 1.3e-22 112.1 82 62.2
Rhsim05G0128300 Rhododendron simsii HOM05D000329 ORTHO05D005330 3.7e-14 84.0 119 43.7
PRCOL_00003022 Prasinoderma coloniale HOM05D000329 ORTHO05D005330 1.1e-13 82.4 399 26.3
Cfa012903 Carpinus fangiana HOM05D000329 ORTHO05D005330 2.4e-13 81.3 80 53.8
Lsat_1_v5_gn_0_32021 Lactuca sativa HOM05D000147 ORTHO05D013131 2.9e-11 74.3 95 45.3
Hund24514 Selenicereus undatus HOM05D003429 ORTHO05D003873 1.9e-10 71.6 403 25.6
unitig_22.g5335 Utricularia gibba HOM05D003429 ORTHO05D003873 1.2e-09 68.9 352 25.0
Mapoly0017s0001 Marchantia polymorpha HOM05D003429 ORTHO05D003873 6.1e-09 66.6 183 27.9
Lsat_1_v5_gn_2_33241 Lactuca sativa HOM05D000329 ORTHO05D005330 8.0e-09 66.2 101 38.6
Atru.chr12.1194 Acer truncatum HOM05D003429 ORTHO05D003873 9.7e-07 59.3 183 25.7
TWI53G2015 Tripterygium wilfordii HOM05D003429 ORTHO05D003873 1.3e-06 58.9 184 27.2
Gohir.A10G192300 Gossypium hirsutum HOM05D003429 ORTHO05D003873 1.7e-06 58.5 183 26.2
Gohir.D10G200200 Gossypium hirsutum HOM05D003429 ORTHO05D003873 1.7e-06 58.5 183 26.2
Gorai.011G224400 Gossypium raimondii HOM05D003429 ORTHO05D003873 1.7e-06 58.5 183 26.2
Thecc.10G129100 Theobroma cacao HOM05D003429 ORTHO05D003873 1.7e-06 58.5 183 25.7
Glyma.04G003000 Glycine max HOM05D003429 ORTHO05D003873 3.7e-06 57.4 362 23.5
A10p30310 Brassica napus HOM05D003429 ORTHO05D003873 4.8e-06 57.0 183 24.6
Duzib114G0344 Durio zibethinus HOM05D003429 ORTHO05D003873 4.8e-06 57.0 183 26.2
Zm00001eb278500 Zea mays HOM05D003429 ORTHO05D003873 4.8e-06 57.0 183 24.6
arahy.Tifrunner.gnm1.ann1.P7SNS1 Arachis hypogaea HOM05D003429 ORTHO05D003873 8.3e-06 56.2 362 23.2
Ciclev10000149m.g Citrus clementina HOM05D003429 ORTHO05D003873 8.3e-06 56.2 183 25.7


User provided reference genes

Program Settings