Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003285g0080 Nicotiana tabacum HOM05D000329 ORTHO05D005330 2.3e-151 538.9 279 100.0
Nitab4.5_0000432g0080 Nicotiana tabacum HOM05D000329 ORTHO05D005330 6.4e-117 424.5 221 96.4
Lj2C42G9 Lonicera japonica HOM05D000329 ORTHO05D005330 4.9e-93 345.1 279 63.1
GSVIVG01023507001 Vitis vinifera HOM05D000329 ORTHO05D005330 1.9e-92 343.2 274 64.6
Peaxi162Scf00304g10137 Petunia axillaris HOM05D000329 ORTHO05D005330 1.6e-91 340.1 263 69.6
Manes.09G147900 Manihot esculenta HOM05D000329 ORTHO05D005330 3.5e-91 339.0 279 63.1
Duzib177G0982 Durio zibethinus HOM05D000329 ORTHO05D005330 5.1e-90 335.1 276 63.0
Gohir.D08G234300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 9.6e-89 330.9 276 62.3
Gorai.004G249100 Gossypium raimondii HOM05D000329 ORTHO05D005330 9.6e-89 330.9 276 62.3
Gohir.A08G217300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 1.3e-88 330.5 276 62.3
Thecc.05G271000 Theobroma cacao HOM05D000329 ORTHO05D005330 2.1e-88 329.7 272 63.6
COL.COLO4_15478 Corchorus olitorius HOM05D000329 ORTHO05D005330 4.8e-88 328.6 271 62.4
MSTRG.316 Avicennia marina HOM05D000329 ORTHO05D005330 8.2e-88 327.8 277 62.1
Actinidia39997 Actinidia chinensis HOM05D000329 ORTHO05D005330 6.9e-87 324.7 268 62.3
Sopen12g010860 Solanum pennellii HOM05D000329 ORTHO05D005330 1.2e-86 323.9 181 89.0
Duzib106G0267 Durio zibethinus HOM05D000329 ORTHO05D005330 5.9e-86 321.6 262 64.1
Atru.chr2.977 Acer truncatum HOM05D000329 ORTHO05D005330 2.9e-85 319.3 274 61.3
Sc09g0004230 Simmondsia chinensis HOM05D000329 ORTHO05D005330 3.8e-85 318.9 271 61.3
SGA_v2.0_scaffold50G18503 Striga asiatica HOM05D000329 ORTHO05D005330 6.5e-85 318.2 286 60.8
Atru.chr2.952 Acer truncatum HOM05D000329 ORTHO05D005330 1.1e-84 317.4 274 60.9
arahy.Tifrunner.gnm1.ann1.LXR25M Arachis hypogaea HOM05D000329 ORTHO05D005330 3.2e-84 315.8 275 61.1
CSS0000359 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 5.5e-84 315.1 272 61.0
Ciclev10018568m.g Citrus clementina HOM05D000329 ORTHO05D005330 9.3e-84 314.3 272 59.6
CSS0019027 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 1.2e-83 313.9 266 61.3
THA.LOC104827286 Tarenaya hassleriana HOM05D000329 ORTHO05D005330 1.6e-83 313.5 273 61.9
Cc02_g08850 Coffea canephora HOM05D000329 ORTHO05D005330 2.7e-83 312.8 278 59.4
DCAR_000979 Daucus carota HOM05D000329 ORTHO05D005330 3.6e-83 312.4 278 58.3
CANSAT54G2567 Cannabis sativa HOM05D000329 ORTHO05D005330 7.9e-83 311.2 274 59.5
Cfa006349 Carpinus fangiana HOM05D000329 ORTHO05D005330 7.9e-83 311.2 270 61.9
TWI56G0006 Tripterygium wilfordii HOM05D000329 ORTHO05D005330 1.0e-82 310.8 278 60.4
PGR004G1157 Punica granatum HOM05D000329 ORTHO05D005330 1.3e-82 310.5 271 58.3
QL03p030482 Quercus lobata HOM05D000329 ORTHO05D005330 1.8e-82 310.1 271 59.8
AT3G04490 Arabidopsis thaliana HOM05D000329 ORTHO05D005330 3.9e-82 308.9 274 60.2
AUR62004837 Chenopodium quinoa HOM05D000329 ORTHO05D005330 5.1e-82 308.5 277 58.1
CiPaw.08G118500 Carya illinoinensis HOM05D000329 ORTHO05D005330 6.7e-82 308.1 277 58.5
Dinv06015 Davidia involucrata HOM05D000329 ORTHO05D005330 6.7e-82 308.1 230 66.1
MELO3C010156.2 Cucumis melo HOM05D000329 ORTHO05D005330 1.9e-81 306.6 275 60.0
Carub.0003s0365 Capsella rubella HOM05D000329 ORTHO05D005330 2.5e-81 306.2 274 59.1
Prupe.7G018700 Prunus persica HOM05D000329 ORTHO05D005330 2.5e-81 306.2 273 59.7
Nn1g02807 Nelumbo nucifera HOM05D000329 ORTHO05D005330 3.3e-81 305.8 276 56.2
Lj1g0020261 Lotus japonicus HOM05D000329 ORTHO05D005330 4.3e-81 305.4 274 58.8
RcHm_v2.0_Chr3g0449631 Rosa chinensis HOM05D000329 ORTHO05D005330 4.3e-81 305.4 245 63.7
Glyma.03G251100 Glycine max HOM05D000329 ORTHO05D005330 9.7e-81 304.3 271 60.9
Phvul.006G105600 Phaseolus vulgaris HOM05D000329 ORTHO05D005330 9.7e-81 304.3 271 60.5
Potri.019G019100 Populus trichocarpa HOM05D000329 ORTHO05D005330 2.2e-80 303.1 271 59.0
Sabra19G0031800 Salix brachista HOM05D000329 ORTHO05D005330 2.2e-80 303.1 281 58.4
MD04G1230100 Malus domestica HOM05D000329 ORTHO05D005330 4.8e-80 302.0 273 57.9
A05p42990 Brassica napus HOM05D000329 ORTHO05D005330 6.3e-80 301.6 274 57.7
C05p62760 Brassica napus HOM05D000329 ORTHO05D005330 6.3e-80 301.6 274 57.7
BolC5t34929H Brassica oleracea HOM05D000329 ORTHO05D005330 6.3e-80 301.6 274 57.7
BraA05t23043Z Brassica rapa HOM05D000329 ORTHO05D005330 6.3e-80 301.6 274 57.7
TAR636G0200 Trochodendron aralioides HOM05D000329 ORTHO05D005330 6.3e-80 301.6 271 59.8
FvH4_6g01900 Fragaria vesca HOM05D000329 ORTHO05D005330 8.2e-80 301.2 245 62.4
FAN14G5238 Fragaria x ananassa HOM05D000329 ORTHO05D005330 8.2e-80 301.2 245 62.4
Ah.06g191840 Amaranthus hybridus HOM05D000329 ORTHO05D005330 1.4e-79 300.4 275 56.7
FAN05G0322 Fragaria x ananassa HOM05D000329 ORTHO05D005330 1.4e-79 300.4 277 58.1
FAN09G2051 Fragaria x ananassa HOM05D000329 ORTHO05D005330 1.8e-79 300.1 239 64.0
BcaC05g30221 Brassica carinata HOM05D000329 ORTHO05D005330 2.4e-79 299.7 274 56.9
Ca_09463_v3 Cicer arietinum L. HOM05D000329 ORTHO05D005330 5.3e-79 298.5 271 60.1
Migut.F01542 Erythranthe guttata HOM05D000329 ORTHO05D005330 5.3e-79 298.5 279 55.6
Aa31LG5G14930 Aethionema arabicum HOM05D000329 ORTHO05D005330 6.9e-79 298.1 273 57.9
FAN14G2464 Fragaria x ananassa HOM05D000329 ORTHO05D005330 6.9e-79 298.1 245 62.0
Psat3g006480 Pisum sativum HOM05D000329 ORTHO05D005330 5.9e-78 295.0 275 58.2
FAN05G4177 Fragaria x ananassa HOM05D000329 ORTHO05D005330 7.7e-78 294.7 321 52.6
Thhalv10019943m.g Eutrema salsugineum HOM05D000329 ORTHO05D005330 1.7e-77 293.5 274 56.2
vmacro19990 Vaccinium macrocarpon HOM05D000329 ORTHO05D005330 2.2e-77 293.1 221 66.1
PSO063G2047 Papaver somniferum HOM05D000329 ORTHO05D005330 2.9e-77 292.7 270 55.6
AL3G14470 Arabidopsis lyrata HOM05D000329 ORTHO05D005330 3.8e-77 292.4 263 58.9
TPR.G6911 Trifolium pratense HOM05D000329 ORTHO05D005330 6.5e-77 291.6 275 57.5
Medtr7g115710 Medicago truncatula HOM05D000329 ORTHO05D005330 5.5e-76 288.5 271 58.3
PSO017G0764 Papaver somniferum HOM05D000329 ORTHO05D005330 1.2e-75 287.3 270 54.1
Sp3g03340 Schrenkiella parvula HOM05D000329 ORTHO05D005330 1.6e-75 287.0 274 55.8
ECA238G1533 Erigeron canadensis HOM05D000329 ORTHO05D005330 2.1e-75 286.6 272 54.8
Lsat_1_v5_gn_2_16061 Lactuca sativa HOM05D000329 ORTHO05D005330 2.1e-75 286.6 267 55.4
CsaV3_1G045290 Cucumis sativus L. HOM05D000329 ORTHO05D005330 1.0e-74 284.3 221 66.1
Lalb_Chr18g0044041 Lupinus albus HOM05D000329 ORTHO05D005330 4.8e-72 275.4 273 54.2
Aqoxy2G03671 Aquilegia oxysepala HOM05D000329 ORTHO05D005330 6.3e-72 275.0 270 53.0
HanXRQChr13g0397671 Helianthus annuus HOM05D000329 ORTHO05D005330 6.9e-71 271.6 259 56.0
Oeu014525.1 Olea europaea HOM05D000329 ORTHO05D005330 1.6e-67 260.4 270 53.3
ATR0736G139 Amborella trichopoda HOM05D000329 ORTHO05D005330 4.8e-64 248.8 240 52.5
EL10Ac4g09016 Beta vulgaris HOM05D000329 ORTHO05D005330 1.1e-63 247.7 277 49.8
BcaC05g30194 Brassica carinata HOM05D000329 ORTHO05D005330 1.1e-63 247.7 284 50.4
Zm00001eb045870 Zea mays HOM05D000329 ORTHO05D005330 1.0e-61 241.1 274 47.8
AUR62040926 Chenopodium quinoa HOM05D000329 ORTHO05D005330 2.9e-61 239.6 277 50.5
Os10g0477000 Oryza sativa ssp. japonica HOM05D000329 ORTHO05D005330 2.5e-60 236.5 274 45.6
Glyma.19G248400 Glycine max HOM05D000329 ORTHO05D005330 5.7e-57 225.3 174 65.5
BcaC05g29938 Brassica carinata HOM05D000329 ORTHO05D005330 1.2e-54 217.6 282 47.2
AagrBONN_evm.TU.Sc2ySwM_228.3774 Anthoceros agrestis HOM05D000329 ORTHO05D005330 1.7e-53 213.8 246 45.1
Hma1.2p1_3491F.1_g336370 Hydrangea macrophylla HOM05D000329 ORTHO05D005330 2.9e-53 213.0 147 67.3
Mapoly0091s0014 Marchantia polymorpha HOM05D000329 ORTHO05D005330 7.2e-52 208.4 241 45.2
unitig_46.g18343 Utricularia gibba HOM05D000329 ORTHO05D005330 2.1e-51 206.8 146 69.2
Pp3c6_27570 Physcomitrium patens HOM05D000329 ORTHO05D005330 4.7e-51 205.7 240 45.0
Sed0005472 Sechium edule HOM05D000329 ORTHO05D005330 6.1e-51 205.3 167 59.9
Cpa.g.sc162.43 Carica papaya HOM05D000329 ORTHO05D005330 6.3e-48 195.3 147 61.9
SMO356G0150 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 1.1e-47 194.5 240 43.3
CDE08G1167 Ceratophyllum demersum HOM05D000329 ORTHO05D005330 1.2e-41 174.5 202 46.5
ClCG06G009470 Citrullus lanatus HOM05D000329 ORTHO05D005330 3.7e-40 169.5 134 62.7
Haze_04430 Corylus avellana HOM05D000329 ORTHO05D005330 1.8e-34 150.6 114 64.0
CBR_g8586 Chara braunii HOM05D000329 ORTHO05D005330 2.9e-32 143.3 236 36.9
QL93p0164_0019 Quercus lobata HOM05D000329 ORTHO05D005330 7.8e-30 135.2 98 65.3
SMO002G0004 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 1.6e-27 127.5 175 40.0
SHI23197 Sapria himalayana HOM05D000329 ORTHO05D005330 3.6e-27 126.3 106 50.9
COL.COLO4_15480 Corchorus olitorius HOM05D000329 ORTHO05D005330 4.6e-22 109.4 126 54.0
QL04p089247 Quercus lobata HOM05D000176 ORTHO05D000106 3.0e-21 106.7 114 52.6
QL05p031734 Quercus lobata HOM05D000176 ORTHO05D000106 3.0e-21 106.7 114 52.6
Haze_04429 Corylus avellana HOM05D000329 ORTHO05D005330 3.9e-21 106.3 80 67.5
Lsat_1_v5_gn_7_52080 Lactuca sativa HOM05D001785 ORTHO05D001150 4.1e-15 86.3 46 87.0
AT4G38092 Arabidopsis thaliana HOM05D000329 ORTHO05D005330 7.1e-15 85.5 110 51.8
SEGI_11781 Sequoiadendron giganteum HOM05D000329 ORTHO05D005330 2.3e-13 80.5 69 56.5
Cpa.g.sc162.42 Carica papaya HOM05D000329 ORTHO05D028196 1.1e-12 78.2 94 48.9
Cre09.g404350 Chlamydomonas reinhardtii HOM05D000329 ORTHO05D005330 3.3e-12 76.6 244 26.6
ClCG06G009450 Citrullus lanatus HOM05D000329 ORTHO05D005330 4.3e-12 76.3 94 52.1
Lsat_1_v5_gn_7_52100 Lactuca sativa HOM05D000329 ORTHO05D005330 1.2e-11 74.7 81 46.9
AT3G05035 Arabidopsis thaliana HOM05D000329 ORTHO05D005330 7.1e-07 58.9 40 70.0


User provided reference genes

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