Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003285g0070 Nicotiana tabacum HOM05D000329 ORTHO05D005330 3.9e-204 714.5 353 100.0
Nitab4.5_0000432g0100 Nicotiana tabacum HOM05D000329 ORTHO05D005330 4.9e-162 574.7 372 81.5
Peaxi162Scf00304g10137 Petunia axillaris HOM05D000329 ORTHO05D005330 6.1e-157 557.8 333 85.6
Sopen12g010860 Solanum pennellii HOM05D000329 ORTHO05D005330 6.4e-154 547.7 333 84.1
Cc02_g08850 Coffea canephora HOM05D000329 ORTHO05D005330 9.5e-134 480.7 333 72.7
Lj2C42G9 Lonicera japonica HOM05D000329 ORTHO05D005330 8.1e-133 477.6 332 72.6
Dinv06015 Davidia involucrata HOM05D000329 ORTHO05D005330 5.2e-132 474.9 333 71.8
CSS0000359 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 1.4e-129 466.8 333 70.3
CSS0019027 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 1.4e-129 466.8 333 70.3
Gohir.D08G234300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 1.4e-129 466.8 333 70.3
Gorai.004G249100 Gossypium raimondii HOM05D000329 ORTHO05D005330 1.9e-129 466.5 333 70.0
Manes.09G147900 Manihot esculenta HOM05D000329 ORTHO05D005330 1.9e-129 466.5 333 71.5
Gohir.A08G217300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 2.1e-128 463.0 333 70.0
Actinidia39997 Actinidia chinensis HOM05D000329 ORTHO05D005330 2.3e-127 459.5 335 70.4
MSTRG.316 Avicennia marina HOM05D000329 ORTHO05D005330 6.6e-127 458.0 333 68.8
Duzib106G0267 Durio zibethinus HOM05D000329 ORTHO05D005330 8.6e-127 457.6 333 69.1
Thecc.05G271000 Theobroma cacao HOM05D000329 ORTHO05D005330 8.6e-127 457.6 333 69.4
Migut.F01542 Erythranthe guttata HOM05D000329 ORTHO05D005330 5.6e-126 454.9 333 69.1
GSVIVG01023507001 Vitis vinifera HOM05D000329 ORTHO05D005330 7.3e-126 454.5 333 70.9
Duzib177G0982 Durio zibethinus HOM05D000329 ORTHO05D005330 1.2e-125 453.8 333 67.6
Oeu014525.1 Olea europaea HOM05D000329 ORTHO05D005330 6.2e-125 451.4 333 70.3
Ciclev10018568m.g Citrus clementina HOM05D000329 ORTHO05D005330 1.4e-124 450.3 333 69.1
ECA238G1533 Erigeron canadensis HOM05D000329 ORTHO05D005330 8.9e-124 447.6 329 67.2
COL.COLO4_15478 Corchorus olitorius HOM05D000329 ORTHO05D005330 1.5e-123 446.8 337 67.7
Prupe.7G018700 Prunus persica HOM05D000329 ORTHO05D005330 4.4e-123 445.3 332 67.8
TWI56G0006 Tripterygium wilfordii HOM05D000329 ORTHO05D005330 6.4e-122 441.4 333 67.0
MD04G1230100 Malus domestica HOM05D000329 ORTHO05D005330 8.4e-122 441.0 332 66.9
Atru.chr2.952 Acer truncatum HOM05D000329 ORTHO05D005330 4.2e-121 438.7 333 67.6
CANSAT54G2567 Cannabis sativa HOM05D000329 ORTHO05D005330 9.3e-121 437.6 333 66.7
Atru.chr2.977 Acer truncatum HOM05D000329 ORTHO05D005330 1.2e-120 437.2 333 67.6
Cfa006349 Carpinus fangiana HOM05D000329 ORTHO05D005330 1.6e-120 436.8 333 67.3
CiPaw.08G118500 Carya illinoinensis HOM05D000329 ORTHO05D005330 1.6e-120 436.8 333 67.0
Potri.019G019100 Populus trichocarpa HOM05D000329 ORTHO05D005330 4.6e-120 435.3 335 67.8
TAR636G0200 Trochodendron aralioides HOM05D000329 ORTHO05D005330 1.0e-119 434.1 333 66.4
HanXRQChr13g0397671 Helianthus annuus HOM05D000329 ORTHO05D005330 1.3e-119 433.7 329 66.9
Lsat_1_v5_gn_2_16061 Lactuca sativa HOM05D000329 ORTHO05D005330 2.3e-119 433.0 329 66.3
PGR004G1157 Punica granatum HOM05D000329 ORTHO05D005330 6.6e-119 431.4 332 67.5
MELO3C010156.2 Cucumis melo HOM05D000329 ORTHO05D005330 4.3e-118 428.7 333 65.8
Glyma.19G248400 Glycine max HOM05D000329 ORTHO05D005330 5.6e-118 428.3 353 62.9
QL03p030482 Quercus lobata HOM05D000329 ORTHO05D005330 5.6e-118 428.3 360 63.6
Psat3g006480 Pisum sativum HOM05D000329 ORTHO05D005330 7.3e-118 427.9 363 61.2
Lalb_Chr18g0044041 Lupinus albus HOM05D000329 ORTHO05D005330 1.3e-117 427.2 362 61.6
Glyma.03G251100 Glycine max HOM05D000329 ORTHO05D005330 1.6e-117 426.8 353 62.6
Nn1g02807 Nelumbo nucifera HOM05D000329 ORTHO05D005330 2.1e-117 426.4 333 64.9
Ca_09463_v3 Cicer arietinum L. HOM05D000329 ORTHO05D005330 4.8e-117 425.2 334 65.9
Lj1g0020261 Lotus japonicus HOM05D000329 ORTHO05D005330 4.8e-117 425.2 334 66.2
TPR.G6911 Trifolium pratense HOM05D000329 ORTHO05D005330 1.4e-116 423.7 334 64.7
FvH4_6g01900 Fragaria vesca HOM05D000329 ORTHO05D005330 9.0e-116 421.0 332 65.1
AL3G14470 Arabidopsis lyrata HOM05D000329 ORTHO05D005330 3.4e-115 419.1 331 63.7
CsaV3_1G045290 Cucumis sativus L. HOM05D000329 ORTHO05D005330 3.4e-115 419.1 333 64.6
THA.LOC104827286 Tarenaya hassleriana HOM05D000329 ORTHO05D005330 3.4e-115 419.1 332 63.6
AT3G04490 Arabidopsis thaliana HOM05D000329 ORTHO05D005330 4.5e-115 418.7 331 63.4
arahy.Tifrunner.gnm1.ann1.LXR25M Arachis hypogaea HOM05D000329 ORTHO05D005330 4.5e-115 418.7 332 64.2
CARHR078650 Cardamine hirsuta HOM05D000329 ORTHO05D005330 4.5e-115 418.7 331 63.1
FAN05G0322 Fragaria x ananassa HOM05D000329 ORTHO05D005330 4.5e-115 418.7 332 64.8
Sp3g03340 Schrenkiella parvula HOM05D000329 ORTHO05D005330 1.3e-114 417.2 332 63.0
Carub.0003s0365 Capsella rubella HOM05D000329 ORTHO05D005330 4.9e-114 415.2 332 62.7
Phvul.006G105600 Phaseolus vulgaris HOM05D000329 ORTHO05D005330 4.9e-114 415.2 353 61.2
Aqoxy2G03671 Aquilegia oxysepala HOM05D000329 ORTHO05D005330 6.4e-114 414.8 333 65.5
vmacro19990 Vaccinium macrocarpon HOM05D000329 ORTHO05D005330 6.4e-114 414.8 450 51.6
PSO063G2047 Papaver somniferum HOM05D000329 ORTHO05D005330 8.4e-114 414.5 333 64.3
A05p42990 Brassica napus HOM05D000329 ORTHO05D005330 1.4e-113 413.7 332 62.3
BcaC05g30221 Brassica carinata HOM05D000329 ORTHO05D005330 2.4e-113 412.9 332 62.3
BolC5t34929H Brassica oleracea HOM05D000329 ORTHO05D005330 3.2e-113 412.5 332 62.3
Medtr7g115710 Medicago truncatula HOM05D000329 ORTHO05D005330 3.2e-113 412.5 363 59.5
PSO017G0764 Papaver somniferum HOM05D000329 ORTHO05D005330 4.2e-113 412.1 331 64.4
C05p62760 Brassica napus HOM05D000329 ORTHO05D005330 7.1e-113 411.4 332 62.0
Thhalv10019943m.g Eutrema salsugineum HOM05D000329 ORTHO05D005330 2.1e-112 409.8 332 62.7
Sabra19G0031800 Salix brachista HOM05D000329 ORTHO05D005330 2.7e-112 409.5 371 60.1
RcHm_v2.0_Chr3g0449631 Rosa chinensis HOM05D000329 ORTHO05D005330 6.0e-112 408.3 332 63.9
AUR62004837 Chenopodium quinoa HOM05D000329 ORTHO05D005330 1.3e-111 407.1 333 63.1
SGA_v2.0_scaffold50G18503 Striga asiatica HOM05D000329 ORTHO05D005330 1.3e-111 407.1 375 58.7
Aa31LG5G14930 Aethionema arabicum HOM05D000329 ORTHO05D005330 1.8e-111 406.8 350 60.0
FAN09G2051 Fragaria x ananassa HOM05D000329 ORTHO05D005330 1.8e-111 406.8 363 59.8
BraA05t23043Z Brassica rapa HOM05D000329 ORTHO05D005330 2.3e-111 406.4 345 60.3
FAN14G5238 Fragaria x ananassa HOM05D000329 ORTHO05D005330 6.7e-111 404.8 363 59.5
FAN14G2464 Fragaria x ananassa HOM05D000329 ORTHO05D005330 8.7e-111 404.4 376 57.4
AUR62040926 Chenopodium quinoa HOM05D000329 ORTHO05D005330 3.3e-110 402.5 333 62.2
Sc09g0004230 Simmondsia chinensis HOM05D000329 ORTHO05D005330 3.1e-108 396.0 330 61.5
EL10Ac4g09016 Beta vulgaris HOM05D000329 ORTHO05D005330 5.8e-107 391.7 333 61.6
Solyc12g027580.3 Solanum lycopersicum HOM05D000329 ORTHO05D005330 1.6e-104 383.6 241 83.4
Ah.06g191840 Amaranthus hybridus HOM05D000329 ORTHO05D005330 1.1e-102 377.5 333 58.6
FAN05G4177 Fragaria x ananassa HOM05D000329 ORTHO05D005330 8.2e-101 371.3 336 58.9
ATR0736G139 Amborella trichopoda HOM05D000329 ORTHO05D005330 4.2e-97 359.0 333 58.0
BcaC05g30194 Brassica carinata HOM05D000329 ORTHO05D005330 5.5e-97 358.6 332 56.6
BcaC05g29938 Brassica carinata HOM05D000329 ORTHO05D005330 1.5e-94 350.5 318 58.5
Sed0007400 Sechium edule HOM05D000329 ORTHO05D005330 7.6e-91 338.2 284 62.0
Zm00001eb045870 Zea mays HOM05D000329 ORTHO05D005330 9.3e-89 331.3 333 51.7
Os10g0477000 Oryza sativa ssp. japonica HOM05D000329 ORTHO05D005330 4.8e-85 318.9 333 50.2
Eucgr.H04230 Eucalyptus grandis HOM05D000329 ORTHO05D005330 1.9e-81 307.0 251 64.5
AagrBONN_evm.TU.Sc2ySwM_228.3774 Anthoceros agrestis HOM05D000329 ORTHO05D005330 1.0e-71 274.6 339 47.5
Pp3c6_27570 Physcomitrium patens HOM05D000329 ORTHO05D005330 8.8e-71 271.6 340 48.5
ClCG06G009480 Citrullus lanatus HOM05D000329 ORTHO05D005330 4.4e-70 269.2 239 62.3
Hma1.2p1_3491F.1_g336380 Hydrangea macrophylla HOM05D000329 ORTHO05D005330 4.4e-70 269.2 227 61.2
Mapoly0091s0014 Marchantia polymorpha HOM05D000329 ORTHO05D005330 1.7e-69 267.3 323 48.0
DCAR_000979 Daucus carota HOM05D000329 ORTHO05D005330 1.4e-68 264.2 245 56.7
Cpa.g.sc162.43 Carica papaya HOM05D000329 ORTHO05D005330 6.7e-63 245.4 173 68.2
Haze_04431 Corylus avellana HOM05D000329 ORTHO05D005330 1.5e-62 244.2 198 65.7
SMO002G0004 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 4.4e-62 242.7 337 42.4
HPP92_025585 Vanilla planifolia HOM05D000329 ORTHO05D005330 1.1e-60 238.0 289 45.3
CDE08G1167 Ceratophyllum demersum HOM05D000329 ORTHO05D005330 4.1e-60 236.1 285 46.7
unitig_46.g18343 Utricularia gibba HOM05D000329 ORTHO05D005330 1.5e-57 227.6 371 38.0
Cpa.g.sc162.46 Carica papaya HOM05D000329 ORTHO05D005330 1.2e-54 218.0 176 64.2
SMO356G0150 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 1.2e-48 198.0 337 37.4
Rhsim10G0071500 Rhododendron simsii HOM05D000329 ORTHO05D005330 1.6e-48 197.6 222 51.8
CBR_g8586 Chara braunii HOM05D000329 ORTHO05D005330 1.4e-44 184.5 328 37.2
Pp3c16_19950 Physcomitrium patens HOM05D000329 ORTHO05D005330 2.4e-36 157.1 298 36.9
Pp3c16_19964 Physcomitrium patens HOM05D000329 ORTHO05D005330 2.4e-36 157.1 298 36.9
Rhsim05G0128300 Rhododendron simsii HOM05D000329 ORTHO05D005330 3.7e-29 133.3 213 41.8
VMungo0540G0180 Vigna mungo HOM05D000329 ORTHO05D005330 6.0e-27 125.9 88 71.6
Haze_04432 Corylus avellana HOM05D000329 ORTHO05D005330 1.5e-22 111.3 89 65.2
SHI23201 Sapria himalayana HOM05D000329 ORTHO05D005330 4.3e-17 93.2 77 59.7
Hma1.2p1_3491F.1_g336370 Hydrangea macrophylla HOM05D000329 ORTHO05D005330 5.8e-14 82.8 43 83.7
Haze_04430 Corylus avellana HOM05D000329 ORTHO05D005330 4.9e-13 79.7 44 81.8
QL04p089247 Quercus lobata HOM05D000176 ORTHO05D000106 5.4e-12 76.3 80 51.2
QL05p031734 Quercus lobata HOM05D000176 ORTHO05D000106 5.4e-12 76.3 80 51.2
SHI23202 Sapria himalayana HOM05D000329 ORTHO05D005330 7.1e-12 75.9 57 64.9
ClCG06G009470 Citrullus lanatus HOM05D000329 ORTHO05D005330 1.6e-11 74.7 43 74.4
QL93p0164_0019 Quercus lobata HOM05D000329 ORTHO05D005330 3.5e-11 73.6 54 64.8
Lsat_1_v5_gn_8_51680 Lactuca sativa HOM05D000144 ORTHO05D005330 1.2e-08 65.1 72 47.2
Lsat_1_v5_gn_7_55340 Lactuca sativa HOM05D000144 ORTHO05D005330 2.1e-08 64.3 72 47.2
Cre09.g404350 Chlamydomonas reinhardtii HOM05D000329 ORTHO05D005330 1.1e-07 62.0 360 23.9
Oeu044815.2 Olea europaea HOM05D002525 ORTHO05D002727 1.8e-07 61.2 41 68.3
SHI23198 Sapria himalayana HOM05D005377 ORTHO05D003034 3.1e-07 60.5 43 58.1


User provided reference genes

Program Settings