Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003284g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.3e-43 178.3 80 100.0
Nitab4.5_0007095g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 5.5e-13 77.4 45 77.8
Nitab4.5_0000946g0040 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.4e-11 72.8 42 76.2
Nitab4.5_0007525g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.3e-11 72.0 76 52.6
Nitab4.5_0002639g0040 Nicotiana tabacum HOM05D006630 ORTHO05D008476 8.8e-11 70.1 42 71.4
Nitab4.5_0000947g0110 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.0e-10 68.9 41 73.2
Nitab4.5_0003385g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.0e-10 68.9 37 81.1
Nitab4.5_0001587g0090 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.6e-10 68.6 62 59.7
Nitab4.5_0003825g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.6e-10 68.6 41 73.2
Nitab4.5_0006664g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 3.3e-10 68.2 42 69.0
Nitab4.5_0000641g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.4e-10 67.8 46 65.2
Nitab4.5_0000749g0170 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.4e-10 67.8 44 68.2
Nitab4.5_0000801g0080 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.4e-10 67.8 37 78.4
Nitab4.5_0001593g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.4e-10 67.8 44 68.2
Nitab4.5_0006733g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.4e-10 67.8 41 73.2
Nitab4.5_0005490g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 5.7e-10 67.4 41 70.7
Nitab4.5_0007833g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 5.7e-10 67.4 41 73.2
Nitab4.5_0010480g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 5.7e-10 67.4 41 70.7
Nitab4.5_0000940g0040 Nicotiana tabacum HOM05D006630 ORTHO05D008476 7.5e-10 67.0 43 67.4
Nitab4.5_0001037g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 7.5e-10 67.0 41 70.7
Nitab4.5_0003338g0100 Nicotiana tabacum HOM05D006630 ORTHO05D008476 7.5e-10 67.0 44 68.2
Nitab4.5_0004911g0060 Nicotiana tabacum HOM05D006630 ORTHO05D008476 7.5e-10 67.0 45 66.7
Nitab4.5_0006505g0040 Nicotiana tabacum HOM05D006630 ORTHO05D008476 7.5e-10 67.0 41 73.2
Nitab4.5_0000778g0060 Nicotiana tabacum HOM05D006630 ORTHO05D008476 9.7e-10 66.6 43 67.4
Nitab4.5_0002879g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 9.7e-10 66.6 41 70.7
Nitab4.5_0004282g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 9.7e-10 66.6 41 70.7
Nitab4.5_0004709g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 9.7e-10 66.6 41 73.2
Nitab4.5_0001169g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.3e-09 66.2 41 70.7
Nitab4.5_0003744g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.3e-09 66.2 53 58.5
Nitab4.5_0000371g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.7e-09 65.9 43 62.8
Nitab4.5_0002513g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.7e-09 65.9 41 70.7
Nitab4.5_0003811g0070 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.7e-09 65.9 41 70.7
Nitab4.5_0008120g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.7e-09 65.9 37 75.7
Nitab4.5_0000594g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.2e-09 65.5 41 70.7
Nitab4.5_0002209g0220 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.2e-09 65.5 41 68.3
Nitab4.5_0002272g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.2e-09 65.5 48 64.6
Nitab4.5_0002496g0080 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.2e-09 65.5 43 62.8
Nitab4.5_0007758g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.2e-09 65.5 41 70.7
Nitab4.5_0004022g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.8e-09 65.1 46 65.2
Nitab4.5_0004882g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.8e-09 65.1 41 68.3
Nitab4.5_0006876g0040 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.8e-09 65.1 44 68.2
Nitab4.5_0000684g0080 Nicotiana tabacum HOM05D006630 ORTHO05D008476 3.7e-09 64.7 60 53.3
Nitab4.5_0004216g0070 Nicotiana tabacum HOM05D006630 ORTHO05D008476 3.7e-09 64.7 41 70.7
Nitab4.5_0005093g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 3.7e-09 64.7 41 70.7
Nitab4.5_0005347g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 3.7e-09 64.7 41 70.7
Nitab4.5_0002790g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.8e-09 64.3 41 68.3
Nitab4.5_0003980g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.8e-09 64.3 42 64.3
Nitab4.5_0005776g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.8e-09 64.3 37 73.0
Nitab4.5_0002276g0040 Nicotiana tabacum HOM05D006630 ORTHO05D008476 6.3e-09 63.9 41 70.7
Nitab4.5_0004319g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 6.3e-09 63.9 41 68.3
Nitab4.5_0006841g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 6.3e-09 63.9 43 62.8
Nitab4.5_0000736g0070 Nicotiana tabacum HOM05D006630 ORTHO05D008476 8.2e-09 63.5 41 65.9
Nitab4.5_0001075g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 8.2e-09 63.5 42 69.0
Nitab4.5_0002451g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 8.2e-09 63.5 41 68.3
Nitab4.5_0002558g0040 Nicotiana tabacum HOM05D006630 ORTHO05D008476 8.2e-09 63.5 41 68.3
Nitab4.5_0003859g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 8.2e-09 63.5 41 73.2
Nitab4.5_0006882g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.1e-08 63.2 41 68.3
Nitab4.5_0008914g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.1e-08 63.2 41 68.3
Nitab4.5_0009029g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.4e-08 62.8 41 68.3
Nitab4.5_0011203g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.4e-08 62.8 33 81.8
Nitab4.5_0001460g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.8e-08 62.4 37 73.0
Nitab4.5_0002497g0070 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.8e-08 62.4 44 63.6
Nitab4.5_0008466g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.8e-08 62.4 41 65.9
Nitab4.5_0001161g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.4e-08 62.0 59 54.2
Nitab4.5_0002020g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.4e-08 62.0 41 68.3
Nitab4.5_0012681g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.4e-08 62.0 41 65.9
Nitab4.5_0013160g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.1e-08 61.2 41 68.3
Nitab4.5_0002081g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 5.3e-08 60.8 58 51.7
Nitab4.5_0003641g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 5.3e-08 60.8 42 64.3
Nitab4.5_0002558g0180 Nicotiana tabacum HOM05D006630 ORTHO05D008476 7.0e-08 60.5 41 65.9
Nitab4.5_0001940g0070 Nicotiana tabacum HOM05D006630 ORTHO05D008476 9.1e-08 60.1 41 68.3
Nitab4.5_0003148g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 9.1e-08 60.1 39 64.1
Nitab4.5_0004248g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 9.1e-08 60.1 34 76.5
Nitab4.5_0001098g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.2e-07 59.7 47 59.6
Nitab4.5_0002892g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.2e-07 59.7 40 62.5
Nitab4.5_0003636g0040 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.2e-07 59.7 35 74.3
Nitab4.5_0007969g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.2e-07 59.7 34 73.5
Nitab4.5_0003691g0060 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.6e-07 59.3 43 60.5
Nitab4.5_0004217g0060 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.6e-07 59.3 53 52.8
Nitab4.5_0000435g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.0e-07 58.9 43 60.5
Nitab4.5_0000339g0060 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.7e-07 58.5 36 69.4
Nitab4.5_0003794g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.7e-07 58.5 32 71.9
Nitab4.5_0000807g0060 Nicotiana tabacum HOM05D006630 ORTHO05D008476 3.5e-07 58.2 37 67.6
Nitab4.5_0001430g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 3.5e-07 58.2 68 44.1
Nitab4.5_0003975g0060 Nicotiana tabacum HOM05D006630 ORTHO05D008476 5.9e-07 57.4 34 73.5
Nitab4.5_0002252g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.0e-06 56.6 52 50.0
Nitab4.5_0003231g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.0e-06 56.6 44 56.8
Nitab4.5_0004735g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.0e-06 56.6 34 73.5
Nitab4.5_0003469g0080 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.3e-06 56.2 26 84.6
Nitab4.5_0004100g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.7e-06 55.8 48 56.2
Nitab4.5_0002413g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.2e-06 55.5 28 75.0
Nitab4.5_0006344g0060 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.2e-06 55.5 35 60.0
Nitab4.5_0001224g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.9e-06 55.1 34 64.7
Nitab4.5_0010860g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.9e-06 55.1 30 73.3
Nitab4.5_0000751g0060 Nicotiana tabacum HOM05D006630 ORTHO05D282353 6.5e-06 53.9 40 60.0
Nitab4.5_0003121g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 8.5e-06 53.5 36 63.9


User provided reference genes

Program Settings