Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003271g0030 Nicotiana tabacum HOM05D008224 ORTHO05D010083 3.0e-57 224.9 113 100.0
Nitab4.5_0006286g0060 Nicotiana tabacum HOM05D008224 ORTHO05D010083 1.6e-53 212.6 113 97.3
Solyc02g083930.1 Solanum lycopersicum HOM05D008224 ORTHO05D010083 3.0e-33 145.2 114 72.8
Sopen02g028710 Solanum pennellii HOM05D008224 ORTHO05D010083 6.8e-33 144.1 114 71.9
PGSC0003DMG400003638 Solanum tuberosum HOM05D008224 ORTHO05D010083 8.8e-33 143.7 100 77.0
Peaxi162Scf00083g00052 Petunia axillaris HOM05D008224 ORTHO05D010083 1.8e-30 136.0 114 69.3
Lj4P218T44 Lonicera japonica HOM05D008224 ORTHO05D010083 1.8e-22 109.4 123 52.8
Oeu064592.1 Olea europaea HOM05D008224 ORTHO05D010083 1.6e-21 106.3 93 63.4
Atru.chr4.381 Acer truncatum HOM05D008224 ORTHO05D010083 2.3e-20 102.4 111 56.8
CSS0002084 Camellia sinensis var. sinensis HOM05D008224 ORTHO05D010083 3.9e-20 101.7 130 50.0
COL.COLO4_21914 Corchorus olitorius HOM05D008224 ORTHO05D010083 4.3e-19 98.2 113 51.3
Potri.005G114500 Populus trichocarpa HOM05D008224 ORTHO05D010083 1.6e-18 96.3 117 53.0
Prupe.7G167900 Prunus persica HOM05D008224 ORTHO05D010083 2.8e-18 95.5 97 51.5
Thecc.01G019300 Theobroma cacao HOM05D008224 ORTHO05D010083 2.8e-18 95.5 113 50.4
Haze_03767 Corylus avellana HOM05D008224 ORTHO05D010083 3.1e-17 92.0 118 46.6
Cc07_g10680 Coffea canephora HOM05D008224 ORTHO05D010083 1.5e-16 89.7 85 55.3
QL12p007153 Quercus lobata HOM05D008224 ORTHO05D010083 1.5e-16 89.7 97 52.6
TAR381G1028 Trochodendron aralioides HOM05D008224 ORTHO05D010083 2.0e-16 89.4 116 49.1
Lalb_Chr09g0321801 Lupinus albus HOM05D008224 ORTHO05D010083 3.4e-16 88.6 98 50.0
TAR625G0799 Trochodendron aralioides HOM05D008224 ORTHO05D010083 3.4e-16 88.6 86 55.8
Gohir.D10G089800 Gossypium hirsutum HOM05D008224 ORTHO05D010083 7.5e-16 87.4 114 48.2
Gorai.011G098500 Gossypium raimondii HOM05D008224 ORTHO05D010083 1.3e-15 86.7 113 46.9
Sabra05G0093700 Salix brachista HOM05D008224 ORTHO05D010083 1.7e-15 86.3 118 49.2
Glyma.11G076300 Glycine max HOM05D008224 ORTHO05D010083 2.9e-15 85.5 86 53.5
Phvul.002G109500 Phaseolus vulgaris HOM05D008224 ORTHO05D010083 2.9e-15 85.5 89 55.1
QL06p032684 Quercus lobata HOM05D008224 ORTHO05D010083 2.9e-15 85.5 97 49.5
Actinidia22982 Actinidia chinensis HOM05D002668 ORTHO05D003295 3.7e-15 85.1 68 66.2
Hma1.2p1_0258F.1_g104170 Hydrangea macrophylla HOM05D008224 ORTHO05D010083 3.7e-15 85.1 78 56.4
Manes.02G104200 Manihot esculenta HOM05D008224 ORTHO05D010083 3.7e-15 85.1 90 51.1
Gohir.A11G175668 Gossypium hirsutum HOM05D008224 ORTHO05D010083 1.1e-14 83.6 113 44.2
CiPaw.08G131800 Carya illinoinensis HOM05D008224 ORTHO05D010083 1.4e-14 83.2 87 51.7
Gohir.A10G098400 Gossypium hirsutum HOM05D008224 ORTHO05D010083 1.4e-14 83.2 113 46.0
Glyma.01G166900 Glycine max HOM05D008224 ORTHO05D010083 2.4e-14 82.4 86 52.3
Ciclev10027456m.g Citrus clementina HOM05D008224 ORTHO05D010083 3.2e-14 82.0 130 44.6
Actinidia17446 Actinidia chinensis HOM05D008224 ORTHO05D010083 2.7e-13 79.0 108 49.1
Hma1.2p1_0956F.1_g241380 Hydrangea macrophylla HOM05D008224 ORTHO05D010083 2.7e-13 79.0 84 53.6
Hma1.2p1_2239F.1_g317816 Hydrangea macrophylla HOM05D008224 ORTHO05D010083 2.7e-13 79.0 84 53.6
FvH4_1g11880 Fragaria vesca HOM05D008224 ORTHO05D010083 3.5e-13 78.6 90 48.9
FAN19G0355 Fragaria x ananassa HOM05D008224 ORTHO05D010083 3.5e-13 78.6 82 52.4
Gohir.D11G183450 Gossypium hirsutum HOM05D008224 ORTHO05D010083 3.5e-13 78.6 113 44.2
Nn5g30159 Nelumbo nucifera HOM05D008224 ORTHO05D010083 7.8e-13 77.4 80 57.5
Aqoxy5G01777 Aquilegia oxysepala HOM05D008224 ORTHO05D010083 1.0e-12 77.0 100 49.0
DCAR_016610 Daucus carota HOM05D008224 ORTHO05D010083 1.7e-12 76.3 101 51.5
Rhsim10G0212800 Rhododendron simsii HOM05D008224 ORTHO05D010083 1.7e-12 76.3 101 47.5
Ca_25829_v3 Cicer arietinum L. HOM05D008224 ORTHO05D010083 3.0e-12 75.5 112 44.6
ECA246G4291 Erigeron canadensis HOM05D008224 ORTHO05D010083 3.9e-12 75.1 139 39.6
Gorai.007G195300 Gossypium raimondii HOM05D008224 ORTHO05D010083 3.9e-12 75.1 115 42.6
Gorai.003G009900 Gossypium raimondii HOM05D008224 ORTHO05D010083 5.0e-12 74.7 85 44.7
Lsat_1_v5_gn_3_74461 Lactuca sativa HOM05D008224 ORTHO05D010083 1.1e-11 73.6 123 42.3
CARHR281490 Cardamine hirsuta HOM05D014245 ORTHO05D010083 2.5e-11 72.4 82 46.3
Medtr5g021840 Medicago truncatula HOM05D008224 ORTHO05D010083 2.5e-11 72.4 112 43.8
Nn1g05883 Nelumbo nucifera HOM05D008224 ORTHO05D010083 2.5e-11 72.4 85 51.8
FAN26G2375 Fragaria x ananassa HOM05D011822 ORTHO05D010083 3.3e-11 72.0 95 44.2
Actinidia28703 Actinidia chinensis HOM05D008224 ORTHO05D010083 4.3e-11 71.6 109 53.2
Carub.0008s2826 Capsella rubella HOM05D014245 ORTHO05D010083 1.6e-10 69.7 93 43.0
Thhalv10005172m.g Eutrema salsugineum HOM05D014245 ORTHO05D010083 2.1e-10 69.3 88 42.0
Psat2g155040 Pisum sativum HOM05D008224 ORTHO05D010083 2.1e-10 69.3 106 42.5
TPR.G18188 Trifolium pratense HOM05D008224 ORTHO05D010083 6.2e-10 67.8 79 48.1
ATR0627G002 Amborella trichopoda HOM05D008224 ORTHO05D010083 8.1e-10 67.4 101 42.6
CsaV3_6G047070 Cucumis sativus L. HOM05D008224 ORTHO05D010083 1.1e-09 67.0 114 39.5
ATR0481G006 Amborella trichopoda HOM05D008224 ORTHO05D010083 2.3e-09 65.9 100 42.0
ClCG01G020280 Citrullus lanatus HOM05D008224 ORTHO05D010083 8.9e-09 63.9 114 39.5
MELO3C007900.2 Cucumis melo HOM05D008224 ORTHO05D010083 2.6e-08 62.4 88 40.9
BcaB02g10776 Brassica carinata HOM05D014245 ORTHO05D010083 3.4e-08 62.0 68 47.1
EL10Ac6g15476 Beta vulgaris HOM05D008224 ORTHO05D010083 5.8e-08 61.2 130 35.4
A06p26690 Brassica napus HOM05D014245 ORTHO05D010083 5.8e-08 61.2 70 48.6
Sed0025479 Sechium edule HOM05D008224 ORTHO05D010083 7.5e-08 60.8 76 47.4
Ah.03g148720 Amaranthus hybridus HOM05D008224 ORTHO05D010083 2.2e-07 59.3 136 33.1
Sp2g30460 Schrenkiella parvula HOM05D014245 ORTHO05D010083 2.9e-07 58.9 89 39.3
AL8G45290 Arabidopsis lyrata HOM05D014245 ORTHO05D010083 4.9e-07 58.2 74 44.6
Sc16g0002160 Simmondsia chinensis HOM05D008224 ORTHO05D010083 1.1e-06 57.0 97 40.2


User provided reference genes

Program Settings