Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003265g0060 Nicotiana tabacum HOM05D006275 ORTHO05D007839 4.7e-73 277.7 135 100.0
Nitab4.5_0009228g0020 Nicotiana tabacum HOM05D006275 ORTHO05D007839 4.5e-68 261.2 130 97.7
Solyc04g080630.4 Solanum lycopersicum HOM05D006275 ORTHO05D007839 3.4e-63 245.0 132 89.4
PGSC0003DMG400003696 Solanum tuberosum HOM05D006275 ORTHO05D007839 1.4e-61 239.6 130 89.2
Peaxi162Scf00140g10025 Petunia axillaris HOM05D006275 ORTHO05D007839 3.5e-60 235.0 128 87.5
SalBow7G2217 Salvia bowleyana HOM05D006275 ORTHO05D007839 1.1e-53 213.4 133 78.9
Oeu047769.1 Olea europaea HOM05D006275 ORTHO05D007839 1.6e-52 209.5 132 78.0
Sopen04g034220 Solanum pennellii HOM05D006275 ORTHO05D007839 7.8e-52 207.2 105 93.3
Oeu002824.1 Olea europaea HOM05D006275 ORTHO05D007839 3.0e-51 205.3 132 75.8
MSTRG.1264 Avicennia marina HOM05D006275 ORTHO05D007839 1.1e-50 203.4 132 77.3
HanXRQChr09g0268981 Helianthus annuus HOM05D006275 ORTHO05D007839 2.5e-50 202.2 134 73.9
Migut.J00614 Erythranthe guttata HOM05D006275 ORTHO05D007839 9.5e-50 200.3 132 74.2
Migut.N00484 Erythranthe guttata HOM05D006275 ORTHO05D007839 3.6e-49 198.4 128 72.7
Lsat_1_v5_gn_4_117720 Lactuca sativa HOM05D006275 ORTHO05D007839 4.7e-49 198.0 134 70.1
Dinv39443 Davidia involucrata HOM05D006275 ORTHO05D007839 1.8e-48 196.1 129 70.5
GSVIVG01009748001 Vitis vinifera HOM05D006275 ORTHO05D007839 6.8e-48 194.1 130 72.3
unitig_46.g17937 Utricularia gibba HOM05D006275 ORTHO05D007839 4.4e-47 191.4 129 71.3
SGA_v2.0_scaffold201G41391 Striga asiatica HOM05D006275 ORTHO05D007839 2.2e-46 189.1 132 68.9
DCAR_022467 Daucus carota HOM05D006275 ORTHO05D007839 3.7e-46 188.3 130 70.8
Manes.05G156800 Manihot esculenta HOM05D006275 ORTHO05D007839 3.7e-46 188.3 132 68.9
EL10Ac1g00643 Beta vulgaris HOM05D006275 ORTHO05D007839 4.9e-46 188.0 134 70.1
AUR62038041 Chenopodium quinoa HOM05D006275 ORTHO05D007839 8.3e-46 187.2 130 69.2
Cc09_g08950 Coffea canephora HOM05D006275 ORTHO05D007839 8.3e-46 187.2 132 73.5
Ah.05g177020 Amaranthus hybridus HOM05D006275 ORTHO05D007839 1.1e-45 186.8 134 68.7
CSS0002686 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 1.4e-45 186.4 134 68.7
CSS0030866 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 1.4e-45 186.4 134 68.7
ECA232G2653 Erigeron canadensis HOM05D006275 ORTHO05D007839 4.1e-45 184.9 133 66.2
Sc02g0005820 Simmondsia chinensis HOM05D006275 ORTHO05D007839 9.2e-45 183.7 130 69.2
THA.LOC104811376 Tarenaya hassleriana HOM05D006275 ORTHO05D007839 1.6e-44 183.0 143 65.7
AUR62014497 Chenopodium quinoa HOM05D006275 ORTHO05D007839 6.0e-44 181.0 134 67.2
Eucgr.F01878 Eucalyptus grandis HOM05D006275 ORTHO05D007839 6.0e-44 181.0 130 66.9
HanXRQChr16g0501501 Helianthus annuus HOM05D006275 ORTHO05D007839 6.0e-44 181.0 131 67.9
A05p02860 Brassica napus HOM05D006275 ORTHO05D007839 7.8e-44 180.6 138 65.2
BraA05t19277Z Brassica rapa HOM05D006275 ORTHO05D007839 7.8e-44 180.6 138 65.2
CANSAT56G0974 Cannabis sativa HOM05D006275 ORTHO05D007839 7.8e-44 180.6 130 69.2
Gohir.A05G192200 Gossypium hirsutum HOM05D006275 ORTHO05D007839 1.0e-43 180.3 136 69.1
C04p03490 Brassica napus HOM05D006275 ORTHO05D007839 1.3e-43 179.9 138 64.5
CsaV3_3G045380 Cucumis sativus L. HOM05D006275 ORTHO05D007839 1.3e-43 179.9 133 68.4
Gohir.D05G195400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 1.3e-43 179.9 136 69.1
Nn1g04018 Nelumbo nucifera HOM05D006275 ORTHO05D007839 1.7e-43 179.5 134 68.7
FAN15G2697 Fragaria x ananassa HOM05D006275 ORTHO05D007839 2.3e-43 179.1 133 67.7
Cpa.g.c33902 Carica papaya HOM05D006275 ORTHO05D007839 3.9e-43 178.3 131 67.9
MELO3C003811.2 Cucumis melo HOM05D006275 ORTHO05D007839 3.9e-43 178.3 133 68.4
Potri.002G033300 Populus trichocarpa HOM05D006275 ORTHO05D007839 3.9e-43 178.3 132 65.9
Gorai.009G200300 Gossypium raimondii HOM05D006275 ORTHO05D007839 5.1e-43 177.9 136 66.9
A07p40910 Brassica napus HOM05D006275 ORTHO05D007839 6.6e-43 177.6 139 63.3
BraA07t31631Z Brassica rapa HOM05D006275 ORTHO05D007839 6.6e-43 177.6 139 63.3
Ciclev10002669m.g Citrus clementina HOM05D006275 ORTHO05D007839 6.6e-43 177.6 134 66.4
BcaC02g12477 Brassica carinata HOM05D006275 ORTHO05D007839 8.6e-43 177.2 138 63.8
BolC4t21983H Brassica oleracea HOM05D006275 ORTHO05D007839 8.6e-43 177.2 138 63.8
Thhalv10019294m.g Eutrema salsugineum HOM05D006275 ORTHO05D007839 8.6e-43 177.2 143 62.2
FAN27G1059 Fragaria x ananassa HOM05D006275 ORTHO05D007839 8.6e-43 177.2 133 66.9
PGR031G1371 Punica granatum HOM05D006275 ORTHO05D007839 8.6e-43 177.2 130 66.2
TWI36G0893 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 8.6e-43 177.2 132 66.7
TAR628G1199 Trochodendron aralioides HOM05D006275 ORTHO05D007839 1.5e-42 176.4 137 65.7
AL2G35280 Arabidopsis lyrata HOM05D006275 ORTHO05D007839 2.5e-42 175.6 141 63.1
BcaC08g47007 Brassica carinata HOM05D006275 ORTHO05D007839 3.3e-42 175.3 143 60.8
ClCG05G018790 Citrullus lanatus HOM05D006275 ORTHO05D007839 4.3e-42 174.9 133 66.9
RcHm_v2.0_Chr6g0301461 Rosa chinensis HOM05D006275 ORTHO05D007839 4.3e-42 174.9 131 66.4
Sed0006872 Sechium edule HOM05D006275 ORTHO05D007839 4.3e-42 174.9 131 65.6
Thecc.08G031000 Theobroma cacao HOM05D006275 ORTHO05D007839 4.3e-42 174.9 136 67.6
AT1G75350 Arabidopsis thaliana HOM05D006275 ORTHO05D007839 7.3e-42 174.1 142 61.3
BcaC08g47361 Brassica carinata HOM05D006275 ORTHO05D007839 7.3e-42 174.1 139 62.6
BolC6t39969H Brassica oleracea HOM05D006275 ORTHO05D007839 7.3e-42 174.1 139 62.6
C06p49340 Brassica napus HOM05D006275 ORTHO05D007839 9.5e-42 173.7 139 62.6
Carub.0002s2219 Capsella rubella HOM05D006275 ORTHO05D007839 1.2e-41 173.3 144 59.7
FvH4_2g39490 Fragaria vesca HOM05D006275 ORTHO05D007839 1.2e-41 173.3 138 63.8
CARHR068700 Cardamine hirsuta HOM05D006275 ORTHO05D007839 4.7e-41 171.4 140 59.3
CiPaw.07G158800 Carya illinoinensis HOM05D006275 ORTHO05D007839 6.2e-41 171.0 136 64.7
PSO731G0021 Papaver somniferum HOM05D006275 ORTHO05D007839 6.2e-41 171.0 139 61.2
Sp5g30490 Schrenkiella parvula HOM05D006275 ORTHO05D007839 6.2e-41 171.0 142 58.5
PSO764G0160 Papaver somniferum HOM05D006275 ORTHO05D007839 8.1e-41 170.6 139 60.4
COL.COLO4_26271 Corchorus olitorius HOM05D006275 ORTHO05D007839 1.1e-40 170.2 133 64.7
Prupe.1G376100 Prunus persica HOM05D006275 ORTHO05D007839 1.8e-40 169.5 133 63.2
CDE02G2235 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 5.2e-40 167.9 130 64.6
Duzib093G0437 Durio zibethinus HOM05D006275 ORTHO05D007839 5.2e-40 167.9 132 65.2
CSS0039262 Camellia sinensis var. sinensis HOM05D006275 ORTHO05D007839 8.9e-40 167.2 128 65.6
CDE06G0798 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 8.9e-40 167.2 132 65.2
Atru.chr13.432 Acer truncatum HOM05D006275 ORTHO05D007839 2.0e-39 166.0 95 76.8
Aa31LG4G5560 Aethionema arabicum HOM05D006275 ORTHO05D007839 2.0e-39 166.0 139 59.0
Sabra02G0026900 Salix brachista HOM05D006275 ORTHO05D007839 2.0e-39 166.0 102 72.5
MD15G1023800 Malus domestica HOM05D006275 ORTHO05D007839 3.4e-39 165.2 134 61.2
arahy.Tifrunner.gnm1.ann1.RSD13X Arachis hypogaea HOM05D006275 ORTHO05D007839 9.9e-39 163.7 133 60.9
arahy.Tifrunner.gnm1.ann1.T5GRUU Arachis hypogaea HOM05D006275 ORTHO05D007839 9.9e-39 163.7 133 60.9
Phvul.001G012400 Phaseolus vulgaris HOM05D006275 ORTHO05D007839 2.2e-38 162.5 133 63.9
Cfa013858 Carpinus fangiana HOM05D006275 ORTHO05D007839 2.9e-38 162.2 123 65.0
ATR0568G031 Amborella trichopoda HOM05D006275 ORTHO05D007839 3.8e-38 161.8 123 63.4
Lalb_Chr22g0354641 Lupinus albus HOM05D006275 ORTHO05D007839 3.8e-38 161.8 125 62.4
Aqoxy5G01584 Aquilegia oxysepala HOM05D006275 ORTHO05D007839 1.1e-37 160.2 135 60.7
arahy.Tifrunner.gnm1.ann1.W9L06J Arachis hypogaea HOM05D006275 ORTHO05D007839 1.1e-37 160.2 127 60.6
arahy.Tifrunner.gnm1.ann1.WR55YC Arachis hypogaea HOM05D006275 ORTHO05D007839 1.1e-37 160.2 127 60.6
Ca_18049_v3 Cicer arietinum L. HOM05D006275 ORTHO05D007839 2.4e-37 159.1 137 60.6
MD08G1027600 Malus domestica HOM05D006275 ORTHO05D007839 3.2e-37 158.7 134 59.7
Haze_22533 Corylus avellana HOM05D006275 ORTHO05D007839 5.4e-37 157.9 101 73.3
VMungo0647G0412 Vigna mungo HOM05D006275 ORTHO05D007839 1.2e-36 156.8 133 61.7
HPP92_009679 Vanilla planifolia HOM05D006275 ORTHO05D007839 1.6e-36 156.4 114 60.5
Actinidia37997 Actinidia chinensis HOM05D006275 ORTHO05D007839 3.5e-36 155.2 121 60.3
Medtr1g022450 Medicago truncatula HOM05D006275 ORTHO05D007839 7.8e-36 154.1 126 61.1
Glyma.14G072400 Glycine max HOM05D006275 ORTHO05D007839 3.0e-35 152.1 139 58.3
Glyma.17G252600 Glycine max HOM05D006275 ORTHO05D007839 1.9e-34 149.4 99 71.7
Lj5g0023115 Lotus japonicus HOM05D006275 ORTHO05D007839 4.3e-34 148.3 141 56.7
Psat6g009240 Pisum sativum HOM05D006275 ORTHO05D007839 1.2e-33 146.7 139 56.1
Rhsim07G0241500 Rhododendron simsii HOM05D006275 ORTHO05D007839 2.1e-33 146.0 141 55.3
RhsimUnG0236400 Rhododendron simsii HOM05D006275 ORTHO05D007839 2.1e-33 146.0 141 55.3
Pp3c4_22510 Physcomitrium patens HOM05D006275 ORTHO05D007839 4.0e-32 141.7 127 52.8
FAN20G1429 Fragaria x ananassa HOM05D006275 ORTHO05D007839 5.2e-32 141.4 105 66.7
TPR.G20152 Trifolium pratense HOM05D006275 ORTHO05D007839 8.9e-32 140.6 126 56.3
Pp3c3_430 Physcomitrium patens HOM05D006275 ORTHO05D007839 2.6e-31 139.0 105 59.0
Pp3c13_7030 Physcomitrium patens HOM05D006275 ORTHO05D007839 9.9e-31 137.1 105 54.3
vmacro04538 Vaccinium macrocarpon HOM05D006275 ORTHO05D007839 2.2e-30 136.0 90 64.4
Mapoly0051s0056 Marchantia polymorpha HOM05D006275 ORTHO05D007839 2.7e-28 129.0 106 54.7
AagrBONN_evm.TU.Sc2ySwM_368.2624 Anthoceros agrestis HOM05D006275 ORTHO05D007839 3.0e-27 125.6 107 55.1
CBR_g52135 Chara braunii HOM05D006275 ORTHO05D007839 7.3e-26 120.9 98 57.1
Os01g0633000 Oryza sativa ssp. japonica HOM05D006275 ORTHO05D007839 1.6e-25 119.8 107 54.2
SMO117G0016 Selaginella moellendorffii HOM05D006275 ORTHO05D007839 1.8e-24 116.3 108 52.8
SEGI_04934 Sequoiadendron giganteum HOM05D006275 ORTHO05D007839 2.4e-24 115.9 100 54.0
Zm00001eb159080 Zea mays HOM05D006275 ORTHO05D007839 2.4e-24 115.9 107 54.2
Duzib041G0262 Durio zibethinus HOM05D006275 ORTHO05D007839 1.2e-23 113.6 70 77.1
QL02p009087 Quercus lobata HOM05D006275 ORTHO05D007839 1.7e-22 109.8 71 70.4
Cre08.g365400 Chlamydomonas reinhardtii HOM05D006275 ORTHO05D007839 8.7e-19 97.4 89 48.3
BcaC09g48250 Brassica carinata HOM05D006275 ORTHO05D007839 2.5e-18 95.9 65 64.6
MCO12G376 Micromonas commoda HOM05D006275 ORTHO05D007839 7.4e-18 94.4 88 43.2
TWI56G0783 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 1.8e-16 89.7 58 75.9
Gohir.D12G058400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 2.4e-16 89.4 74 60.8
Gorai.010G176600 Gossypium raimondii HOM05D006275 ORTHO05D007839 1.1e-13 80.5 75 58.7
BcaC05g28396 Brassica carinata HOM05D006275 ORTHO05D003437 4.3e-10 68.6 56 64.3
Sabra05G0177600 Salix brachista HOM05D006275 ORTHO05D007839 2.6e-07 59.3 58 48.3


User provided reference genes

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