Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003264g0060 Nicotiana tabacum HOM05D007248 ORTHO05D000013 2.1e-31 138.3 63 100.0
Nitab4.5_0001472g0130 Nicotiana tabacum HOM05D000017 ORTHO05D000013 1.1e-27 125.9 69 87.0
Nitab4.5_0006628g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.5e-24 114.8 65 84.6
Nitab4.5_0008559g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000013 4.2e-24 114.0 88 63.6
Nitab4.5_0009017g0010 Nicotiana tabacum HOM05D000017 ORTHO05D002765 7.1e-24 113.2 89 64.0
Nitab4.5_0006179g0060 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.5e-23 110.9 65 81.5
Nitab4.5_0004496g0020 Nicotiana tabacum HOM05D007248 ORTHO05D000013 3.0e-22 107.8 89 61.8
Nitab4.5_0009030g0020 Nicotiana tabacum HOM05D007248 ORTHO05D000013 5.1e-22 107.1 68 75.0
Nitab4.5_0003730g0050 Nicotiana tabacum HOM05D000017 ORTHO05D002765 1.1e-21 105.9 66 77.3
Nitab4.5_0000067g0150 Nicotiana tabacum HOM05D000017 ORTHO05D000013 1.9e-21 105.1 66 75.8
Nitab4.5_0010618g0050 Nicotiana tabacum HOM05D000017 ORTHO05D000013 1.9e-21 105.1 69 75.4
Nitab4.5_0007005g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.3e-21 104.0 86 62.8
Nitab4.5_0002373g0130 Nicotiana tabacum HOM05D000017 ORTHO05D000013 5.7e-21 103.6 86 61.6
Nitab4.5_0001446g0040 Nicotiana tabacum HOM05D007248 ORTHO05D000013 7.4e-21 103.2 62 77.4
Nitab4.5_0002612g0060 Nicotiana tabacum HOM05D007248 ORTHO05D000013 7.4e-21 103.2 64 79.7
Nitab4.5_0002151g0040 Nicotiana tabacum HOM05D000017 ORTHO05D000013 9.6e-21 102.8 88 60.2
Nitab4.5_0007029g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.7e-20 100.9 70 74.3
Nitab4.5_0001179g0040 Nicotiana tabacum HOM05D000017 ORTHO05D000013 4.8e-20 100.5 89 59.6
Nitab4.5_0004143g0050 Nicotiana tabacum HOM05D007248 ORTHO05D000013 8.2e-20 99.8 86 60.5
Nitab4.5_0000159g0210 Nicotiana tabacum HOM05D000017 ORTHO05D000013 1.4e-19 99.0 86 60.5
Nitab4.5_0011126g0030 Nicotiana tabacum HOM05D007248 ORTHO05D000013 2.4e-19 98.2 76 64.5
Nitab4.5_0000709g0030 Nicotiana tabacum HOM05D000017 ORTHO05D002765 3.1e-19 97.8 86 58.1
Nitab4.5_0000207g0340 Nicotiana tabacum HOM05D000017 ORTHO05D000013 1.2e-18 95.9 86 57.0
Nitab4.5_0001140g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.5e-18 95.5 88 56.8
Nitab4.5_0004211g0040 Nicotiana tabacum HOM05D000017 ORTHO05D000013 1.5e-18 95.5 88 58.0
Nitab4.5_0005258g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000013 2.0e-18 95.1 86 57.0
Nitab4.5_0000980g0150 Nicotiana tabacum HOM05D007248 ORTHO05D000013 5.9e-18 93.6 73 67.1
Nitab4.5_0001030g0060 Nicotiana tabacum HOM05D000017 ORTHO05D000013 5.9e-18 93.6 86 57.0
Nitab4.5_0001968g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.8e-17 90.9 70 67.1
Nitab4.5_0000095g0010 Nicotiana tabacum HOM05D000017 ORTHO05D000013 1.9e-16 88.6 85 55.3
Nitab4.5_0011727g0050 Nicotiana tabacum HOM05D000017 ORTHO05D002765 2.5e-16 88.2 89 53.9
Sopen09g020250 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-16 88.2 84 54.8
Sopen12g022630 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-16 88.2 84 54.8
Sopen08g004190 Solanum pennellii HOM05D000017 ORTHO05D000013 5.5e-16 87.0 84 53.6
Sopen12g007420 Solanum pennellii HOM05D000017 ORTHO05D000013 1.5e-13 79.0 84 48.8
Nitab4.5_0006644g0060 Nicotiana tabacum HOM05D007248 ORTHO05D000013 1.9e-13 78.6 69 56.5
Nitab4.5_0000692g0110 Nicotiana tabacum HOM05D007248 ORTHO05D000013 9.1e-11 69.7 57 63.2
Nitab4.5_0015150g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.5e-10 68.9 34 88.2
Nitab4.5_0010319g0070 Nicotiana tabacum HOM05D007248 ORTHO05D000013 2.0e-10 68.6 35 85.7
Nitab4.5_0008756g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.0e-09 66.2 33 90.9
Sopen10g020700 Solanum pennellii HOM05D000017 ORTHO05D000013 2.2e-09 65.1 87 35.6
Nitab4.5_0008752g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.9e-09 64.7 35 82.9
Nitab4.5_0002258g0010 Nicotiana tabacum HOM05D000017 ORTHO05D000013 8.5e-09 63.2 77 44.2
Nitab4.5_0013025g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.1e-08 62.8 28 96.4
Sopen04g016440 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-08 62.8 61 49.2
Nitab4.5_0000431g0290 Nicotiana tabacum HOM05D007248 ORTHO05D036936 1.4e-08 62.4 33 84.8
Sopen09g021110 Solanum pennellii HOM05D000017 ORTHO05D000013 5.5e-08 60.5 87 34.5
CAN.G114.4 Capsicum annuum HOM05D006372 ORTHO05D007484 1.2e-07 59.3 88 36.4
Nitab4.5_0011716g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.2e-07 59.3 36 75.0
Sopen10g005650 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-07 59.3 87 35.6
Nitab4.5_0008985g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.6e-07 58.9 28 89.3
Sopen07g021550 Solanum pennellii HOM05D000017 ORTHO05D000013 1.0e-06 56.2 34 70.6
Sopen02g010790 Solanum pennellii HOM05D000017 ORTHO05D009561 1.4e-06 55.8 35 71.4
Nitab4.5_0000044g0610 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.8e-06 55.5 38 68.4
Nitab4.5_0000007g0080 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.3e-06 55.1 39 64.1
Nitab4.5_0001464g0130 Nicotiana tabacum HOM05D000017 ORTHO05D000013 2.3e-06 55.1 85 37.6
Nitab4.5_0000027g0260 Nicotiana tabacum HOM05D009153 ORTHO05D000013 6.7e-06 53.5 79 36.7
Sopen04g032910 Solanum pennellii HOM05D000017 ORTHO05D000013 6.7e-06 53.5 61 42.6
Sopen05g008000 Solanum pennellii HOM05D000017 ORTHO05D000013 6.7e-06 53.5 61 42.6
Sopen07g013190 Solanum pennellii HOM05D000017 ORTHO05D000013 6.7e-06 53.5 61 42.6
Sopen08g005870 Solanum pennellii HOM05D000017 ORTHO05D000013 6.7e-06 53.5 61 42.6
Sopen11g013400 Solanum pennellii HOM05D000017 ORTHO05D000013 6.7e-06 53.5 61 42.6


User provided reference genes

Program Settings