Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003261g0020 Nicotiana tabacum HOM05D006842 ORTHO05D008908 1.3e-35 152.5 77 100.0
QL12p035267 Quercus lobata HOM05D006842 ORTHO05D008908 1.1e-10 69.7 44 68.2
CSS0012280 Camellia sinensis var. sinensis HOM05D006842 ORTHO05D008908 1.4e-10 69.3 42 69.0
Atru.chr8.567 Acer truncatum HOM05D006842 ORTHO05D008908 1.9e-10 68.9 53 60.4
Haze_22005 Corylus avellana HOM05D006842 ORTHO05D008908 3.2e-10 68.2 42 66.7
Actinidia01285 Actinidia chinensis HOM05D006842 ORTHO05D008908 5.5e-10 67.4 43 65.1
Cfa013438 Carpinus fangiana HOM05D006842 ORTHO05D008908 1.6e-09 65.9 42 64.3
HanXRQChr03g0068361 Helianthus annuus HOM05D006842 ORTHO05D008908 3.6e-09 64.7 42 61.9
Lsat_1_v5_gn_7_55601 Lactuca sativa HOM05D006842 ORTHO05D008908 4.6e-09 64.3 55 49.1
GSVIVG01012780001 Vitis vinifera HOM05D006842 ORTHO05D008908 4.6e-09 64.3 44 63.6
Ah.14g084430 Amaranthus hybridus HOM05D006842 ORTHO05D008908 6.1e-09 63.9 41 68.3
DCAR_020473 Daucus carota HOM05D006842 ORTHO05D008908 7.9e-09 63.5 61 45.9
FvH4_4g07420 Fragaria vesca HOM05D006842 ORTHO05D008908 7.9e-09 63.5 42 61.9
FAN12G0114 Fragaria x ananassa HOM05D006842 ORTHO05D008908 7.9e-09 63.5 42 61.9
FAN07G2675 Fragaria x ananassa HOM05D006842 ORTHO05D008908 1.0e-08 63.2 41 63.4
Glyma.15G164700 Glycine max HOM05D006842 ORTHO05D008908 1.0e-08 63.2 49 59.2
Cpa.g.sc95.19 Carica papaya HOM05D006842 ORTHO05D008908 1.4e-08 62.8 42 61.9
AUR62039733 Chenopodium quinoa HOM05D006842 ORTHO05D008908 1.4e-08 62.8 53 56.6
Rhsim01G0118900 Rhododendron simsii HOM05D006842 ORTHO05D008908 1.4e-08 62.8 40 67.5
Hund08945 Selenicereus undatus HOM05D006842 ORTHO05D008908 1.4e-08 62.8 44 59.1
CiPaw.16G087400 Carya illinoinensis HOM05D006842 ORTHO05D008908 1.8e-08 62.4 42 64.3
RcHm_v2.0_Chr2g0131261 Rosa chinensis HOM05D006842 ORTHO05D008908 2.3e-08 62.0 51 54.9
RcHm_v2.0_Chr4g0399881 Rosa chinensis HOM05D006842 ORTHO05D008908 2.3e-08 62.0 51 54.9
vmacro20826 Vaccinium macrocarpon HOM05D006842 ORTHO05D008908 3.0e-08 61.6 47 53.2
VMungo1309G0481 Vigna mungo HOM05D006842 ORTHO05D008908 3.0e-08 61.6 66 45.5
Nitab4.5_0005943g0060 Nicotiana tabacum HOM05D006842 ORTHO05D008908 3.9e-08 61.2 29 96.6
AL8G33220 Arabidopsis lyrata HOM05D006842 ORTHO05D008908 5.1e-08 60.8 50 58.0
Carub.0008s1775 Capsella rubella HOM05D006842 ORTHO05D008908 5.1e-08 60.8 50 58.0
Potri.018G143800 Populus trichocarpa HOM05D006842 ORTHO05D008908 6.7e-08 60.5 43 60.5
PGR142G3186 Punica granatum HOM05D006842 ORTHO05D008908 8.8e-08 60.1 50 58.0
Ciclev10010743m.g Citrus clementina HOM05D006842 ORTHO05D008908 1.1e-07 59.7 42 59.5
Aa31LG3G13140 Aethionema arabicum HOM05D006842 ORTHO05D008908 1.5e-07 59.3 61 47.5
Thhalv10012580m.g Eutrema salsugineum HOM05D006842 ORTHO05D008908 1.5e-07 59.3 50 56.0
TPR.G30782 Trifolium pratense HOM05D006842 ORTHO05D008908 1.5e-07 59.3 44 56.8
Psat1g144960 Pisum sativum HOM05D006842 ORTHO05D008908 2.0e-07 58.9 48 54.2
Sp6g18980 Schrenkiella parvula HOM05D006842 ORTHO05D008908 2.0e-07 58.9 50 56.0
CARHR271050 Cardamine hirsuta HOM05D006842 ORTHO05D008908 2.6e-07 58.5 51 52.9
AUR62025363 Chenopodium quinoa HOM05D006842 ORTHO05D008908 2.6e-07 58.5 42 57.1
AUR62028364 Chenopodium quinoa HOM05D006842 ORTHO05D008908 3.3e-07 58.2 41 58.5
SalBow5G4345 Salvia bowleyana HOM05D006842 ORTHO05D008908 3.3e-07 58.2 46 54.3
AT5G57250 Arabidopsis thaliana HOM05D006842 ORTHO05D008908 4.4e-07 57.8 51 52.9
Sabra18G0117200 Salix brachista HOM05D006842 ORTHO05D008908 5.7e-07 57.4 43 55.8
Ca_02053_v3 Cicer arietinum L. HOM05D006842 ORTHO05D008908 7.4e-07 57.0 49 55.1
Thecc.09G184100 Theobroma cacao HOM05D006842 ORTHO05D008908 7.4e-07 57.0 42 54.8
TWI34G1525 Tripterygium wilfordii HOM05D006842 ORTHO05D008908 9.7e-07 56.6 37 70.3
Phvul.009G237200 Phaseolus vulgaris HOM05D006842 ORTHO05D008908 1.3e-06 56.2 62 45.2
MSTRG.26539 Avicennia marina HOM05D006842 ORTHO05D008908 1.7e-06 55.8 42 59.5
Eucgr.D01013 Eucalyptus grandis HOM05D006842 ORTHO05D008908 1.7e-06 55.8 42 61.9
TAR626G0090 Trochodendron aralioides HOM05D006842 ORTHO05D008908 1.7e-06 55.8 44 54.5
COL.COLO4_38436 Corchorus olitorius HOM05D006842 ORTHO05D008908 2.2e-06 55.5 44 59.1
Lj6g0009672 Lotus japonicus HOM05D006842 ORTHO05D008908 3.7e-06 54.7 62 46.8
ECA240G2145 Erigeron canadensis HOM05D006842 ORTHO05D008908 6.3e-06 53.9 41 51.2
Medtr2g037740 Medicago truncatula HOM05D006842 ORTHO05D008908 6.3e-06 53.9 45 53.3


User provided reference genes

Program Settings