Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003251g0090 Nicotiana tabacum HOM05D006932 ORTHO05D009616 0.0e+00 2070.8 1087 100.0
Nitab4.5_0000337g0050 Nicotiana tabacum HOM05D006932 ORTHO05D009616 0.0e+00 1506.9 1469 61.6
Sopen08g012470 Solanum pennellii HOM05D006932 ORTHO05D009616 4.1e-268 928.7 1222 51.2
CAN.G6.34 Capsicum annuum HOM05D006932 ORTHO05D009616 7.0e-268 927.9 1219 49.3
Peaxi162Scf00553g00220 Petunia axillaris HOM05D006932 ORTHO05D009616 2.4e-207 726.9 751 59.0
Dinv31864 Davidia involucrata HOM05D006932 ORTHO05D009616 1.2e-121 442.2 662 45.5
Cc10_g01490 Coffea canephora HOM05D006932 ORTHO05D009616 1.0e-114 419.1 592 46.3
Actinidia37937 Actinidia chinensis HOM05D006932 ORTHO05D009616 2.4e-103 381.3 652 42.3
Migut.C00855 Erythranthe guttata HOM05D006932 ORTHO05D009616 5.1e-101 373.6 1310 30.2
Potri.013G068501 Populus trichocarpa HOM05D006932 ORTHO05D009616 1.2e-99 369.0 610 43.8
TWI56G1403 Tripterygium wilfordii HOM05D006932 ORTHO05D009616 4.7e-99 367.1 624 41.2
TAR628G0089 Trochodendron aralioides HOM05D006932 ORTHO05D009616 1.1e-98 365.9 910 34.9
SalBow7G2156 Salvia bowleyana HOM05D006932 ORTHO05D009616 1.8e-98 365.2 605 43.1
COL.COLO4_26127 Corchorus olitorius HOM05D006932 ORTHO05D009616 3.1e-98 364.4 604 43.0
Duzib093G0008 Durio zibethinus HOM05D006932 ORTHO05D009616 5.2e-98 363.6 590 44.4
CiPaw.07G147900 Carya illinoinensis HOM05D006932 ORTHO05D009616 2.2e-96 358.2 580 42.4
Lsat_1_v5_gn_2_12640 Lactuca sativa HOM05D006932 ORTHO05D009616 2.2e-96 358.2 882 34.9
CANSAT25G0116 Cannabis sativa HOM05D006932 ORTHO05D009616 8.4e-96 356.3 597 42.4
BcaB03g14335 Brassica carinata HOM05D006932 ORTHO05D009616 3.2e-95 354.4 638 38.7
GSVIVG01009938001 Vitis vinifera HOM05D006932 ORTHO05D009616 4.6e-94 350.5 563 42.8
FAN15G2452 Fragaria x ananassa HOM05D006932 ORTHO05D009616 3.0e-93 347.8 597 41.2
FvH4_2g38240 Fragaria vesca HOM05D006932 ORTHO05D009616 1.5e-92 345.5 598 40.8
Carub.0001s1959 Capsella rubella HOM05D006932 ORTHO05D009616 2.5e-92 344.7 614 38.3
CARHR020530 Cardamine hirsuta HOM05D006932 ORTHO05D009616 5.6e-92 343.6 668 37.4
RcHm_v2.0_Chr6g0303131 Rosa chinensis HOM05D006932 ORTHO05D009616 7.3e-92 343.2 902 33.9
Thhalv10006798m.g Eutrema salsugineum HOM05D006932 ORTHO05D009616 9.6e-92 342.8 607 39.0
Thecc.08G046600 Theobroma cacao HOM05D006932 ORTHO05D009616 9.6e-92 342.8 732 37.4
Prupe.1G363400 Prunus persica HOM05D006932 ORTHO05D009616 1.6e-91 342.0 620 39.8
Manes.18G012000 Manihot esculenta HOM05D006932 ORTHO05D009616 2.1e-91 341.7 609 40.4
TPR.G34552 Trifolium pratense HOM05D006932 ORTHO05D009616 3.6e-91 340.9 1264 28.6
THA.LOC104811418 Tarenaya hassleriana HOM05D006932 ORTHO05D009616 8.1e-91 339.7 1031 32.4
AT1G20060 Arabidopsis thaliana HOM05D006932 ORTHO05D009616 1.1e-90 339.3 663 37.1
BraA07t29332Z Brassica rapa HOM05D006932 ORTHO05D009616 1.1e-90 339.3 683 37.6
C07p23410 Brassica napus HOM05D006932 ORTHO05D009616 5.2e-90 337.0 645 37.2
Lj4C22G4 Lonicera japonica HOM05D006932 ORTHO05D009616 5.2e-90 337.0 864 35.3
A07p16040 Brassica napus HOM05D006932 ORTHO05D009616 8.9e-90 336.3 683 37.2
BcaB03g14345 Brassica carinata HOM05D006932 ORTHO05D009616 4.4e-89 334.0 645 37.2
HanXRQChr14g0431051 Helianthus annuus HOM05D006932 ORTHO05D009616 7.6e-89 333.2 462 47.2
BolC7t42874H Brassica oleracea HOM05D006932 ORTHO05D009616 9.9e-89 332.8 664 36.7
AL1G32860 Arabidopsis lyrata HOM05D006932 ORTHO05D009616 1.7e-88 332.0 616 38.5
Gorai.009G193700 Gossypium raimondii HOM05D006932 ORTHO05D009616 1.7e-88 332.0 613 40.3
Sed0011683 Sechium edule HOM05D006932 ORTHO05D009616 2.2e-88 331.6 897 34.4
ClCG08G014220 Citrullus lanatus HOM05D006932 ORTHO05D009616 3.8e-88 330.9 900 33.9
Phvul.009G009500 Phaseolus vulgaris HOM05D006932 ORTHO05D009616 8.4e-88 329.7 860 33.5
DCAR_019767 Daucus carota HOM05D002235 ORTHO05D006252 1.4e-87 328.9 1165 29.8
Gohir.D05G188400 Gossypium hirsutum HOM05D006932 ORTHO05D009616 1.9e-87 328.6 614 39.9
CsaV3_2G029620 Cucumis sativus L. HOM05D006932 ORTHO05D009616 1.2e-86 325.9 902 33.5
QL02p012013 Quercus lobata HOM05D006932 ORTHO05D009616 2.1e-86 325.1 820 33.7
Solyc08g042030.3 Solanum lycopersicum HOM05D006932 ORTHO05D009616 2.1e-86 325.1 377 56.0
FAN27G2636 Fragaria x ananassa HOM05D006932 ORTHO05D009616 6.0e-86 323.6 894 33.2
Lj1g0021590 Lotus japonicus HOM05D006932 ORTHO05D009616 6.0e-86 323.6 610 38.7
SGA_v2.0_scaffold92G28210 Striga asiatica HOM05D006932 ORTHO05D009616 1.0e-85 322.8 646 38.2
Gohir.A05G185600 Gossypium hirsutum HOM05D006932 ORTHO05D009616 2.3e-85 321.6 617 39.9
Cpa.g.sc26.310 Carica papaya HOM05D006932 ORTHO05D009616 3.0e-85 321.2 606 41.1
MELO3C011020.2 Cucumis melo HOM05D006932 ORTHO05D009616 3.9e-85 320.9 896 33.6
Sp1g17820 Schrenkiella parvula HOM05D006932 ORTHO05D009616 1.5e-84 318.9 824 33.6
MD08G1010800 Malus domestica HOM05D006932 ORTHO05D009616 5.6e-84 317.0 749 34.7
Aa31LG7G4500 Aethionema arabicum HOM05D006932 ORTHO05D009616 7.3e-84 316.6 668 36.5
VMungo1309G1702 Vigna mungo HOM05D006932 ORTHO05D009616 9.6e-84 316.2 850 34.1
ECA238G0815 Erigeron canadensis HOM05D006932 ORTHO05D009616 2.8e-83 314.7 1341 28.8
Medtr3g113630 Medicago truncatula HOM05D006932 ORTHO05D009616 4.8e-83 313.9 1258 29.2
RhsimUnG0065200 Rhododendron simsii HOM05D006932 ORTHO05D009616 1.2e-81 309.3 693 36.4
Ciclev10003784m.g Citrus clementina HOM05D006932 ORTHO05D009616 2.6e-81 308.1 677 36.5
PSO170G2579 Papaver somniferum HOM05D006932 ORTHO05D009616 5.8e-81 307.0 591 37.4
PGR031G2736 Punica granatum HOM05D006932 ORTHO05D009616 5.8e-81 307.0 674 35.3
PSO700G0201 Papaver somniferum HOM05D006932 ORTHO05D009616 4.9e-80 303.9 591 37.4
Psat0s2878g0080 Pisum sativum HOM05D006932 ORTHO05D009616 6.4e-80 303.5 863 32.8
Nn5g30750 Nelumbo nucifera HOM05D006932 ORTHO05D009616 9.3e-79 299.7 805 32.5
Glyma.06G023500 Glycine max HOM05D006932 ORTHO05D009616 1.6e-78 298.9 662 35.3
Aqoxy5G01813 Aquilegia oxysepala HOM05D006932 ORTHO05D009616 1.0e-77 296.2 670 36.0
Sc15g0004860 Simmondsia chinensis HOM05D006932 ORTHO05D009616 1.0e-77 296.2 663 36.5
Lalb_Chr23g0266091 Lupinus albus HOM05D006932 ORTHO05D009616 6.7e-77 293.5 605 36.0
arahy.Tifrunner.gnm1.ann1.Z8J4EM Arachis hypogaea HOM05D006932 ORTHO05D009616 3.3e-76 291.2 652 35.7
arahy.Tifrunner.gnm1.ann1.XXR9N9 Arachis hypogaea HOM05D006932 ORTHO05D009616 1.3e-75 289.3 612 36.1
Haze_22656 Corylus avellana HOM05D006932 ORTHO05D009616 4.5e-73 280.8 516 39.9
Hund05180 Selenicereus undatus HOM05D006932 ORTHO05D009616 9.9e-73 279.6 862 30.7
TAR376G0059 Trochodendron aralioides HOM05D006932 ORTHO05D009616 3.2e-71 274.6 603 35.3
unitig_899.g15428 Utricularia gibba HOM05D006932 ORTHO05D009616 5.1e-69 267.3 608 35.5
AUR62041481 Chenopodium quinoa HOM05D006932 ORTHO05D009616 2.6e-65 255.0 572 36.5
Os02g0101800 Oryza sativa ssp. japonica HOM05D006932 ORTHO05D009616 1.2e-62 246.1 611 33.1
PGSC0003DMG400000962 Solanum tuberosum HOM05D006932 ORTHO05D014708 5.7e-60 237.3 239 61.5
ATR0090G024 Amborella trichopoda HOM05D006932 ORTHO05D009616 9.6e-60 236.5 640 32.8
EL10Ac1g02169 Beta vulgaris HOM05D006932 ORTHO05D009616 4.5e-57 227.6 594 33.2
Lj6g0018015 Lotus japonicus HOM05D006932 ORTHO05D009616 6.5e-56 223.8 645 30.7
Solyc08g042040.4 Solanum lycopersicum HOM05D006932 ORTHO05D014708 6.1e-54 217.2 206 64.6
Zm00001eb210100 Zea mays HOM05D006932 ORTHO05D009616 1.5e-52 212.6 642 30.8
Peaxi162Scf00553g00219 Petunia axillaris HOM05D006932 ORTHO05D014708 5.3e-50 204.1 168 66.1
Prupe.8G272100 Prunus persica HOM05D006932 ORTHO05D009616 3.4e-49 201.4 376 37.0
CSS0004225 Camellia sinensis var. sinensis HOM05D006932 ORTHO05D009616 7.7e-49 200.3 260 50.4
HPP92_014539 Vanilla planifolia HOM05D006932 ORTHO05D009616 4.2e-47 194.5 566 29.2
Ca_00838_v3 Cicer arietinum L. HOM05D006932 ORTHO05D009616 1.3e-43 183.0 958 27.8
SEGI_37211 Sequoiadendron giganteum HOM05D006932 ORTHO05D009616 2.5e-39 168.7 904 24.4
AUR62040551 Chenopodium quinoa HOM05D006932 ORTHO05D009616 3.3e-36 158.3 325 38.2
FAN20G1755 Fragaria x ananassa HOM05D006932 ORTHO05D009616 1.1e-34 153.3 253 43.5
CSS0004466 Camellia sinensis var. sinensis HOM05D006932 ORTHO05D009616 1.8e-21 109.4 89 65.2
FvH4_4g19391 Fragaria vesca HOM05D006932 ORTHO05D029497 9.8e-20 103.6 160 43.1
Eucgr.H00965 Eucalyptus grandis HOM05D006932 ORTHO05D009616 1.9e-15 89.4 142 43.7
GSVIVG01009937001 Vitis vinifera HOM05D006932 ORTHO05D014708 5.2e-13 81.3 110 42.7
vmacro04363 Vaccinium macrocarpon HOM05D006932 ORTHO05D014708 4.9e-11 74.7 66 60.6
AUR62032598 Chenopodium quinoa HOM05D006932 ORTHO05D021074 1.8e-10 72.8 57 57.9
Eucgr.H00968 Eucalyptus grandis HOM05D006932 ORTHO05D014708 1.8e-10 72.8 125 38.4
MBI09_g14155_MAGBIO Magnolia biondii HOM05D025692 ORTHO05D014708 9.2e-10 70.5 112 39.3
CSS0046587 Camellia sinensis var. sinensis HOM05D006932 ORTHO05D014708 4.5e-09 68.2 64 56.2
Eucgr.H00967 Eucalyptus grandis HOM05D006932 ORTHO05D009616 7.8e-09 67.4 127 38.6
FAN14G5081 Fragaria x ananassa HOM05D044563 ORTHO05D046046 5.0e-08 64.7 67 47.8
HPP92_007515 Vanilla planifolia HOM05D000108 ORTHO05D015575 1.1e-07 63.5 157 33.1
HanXRQChr14g0431041 Helianthus annuus HOM05D025692 ORTHO05D014708 1.5e-07 63.2 178 30.3
Ciclev10011247m.g Citrus clementina HOM05D000108 ORTHO05D002946 3.3e-07 62.0 174 27.6
MD12G1093100 Malus domestica HOM05D000240 ORTHO05D002608 3.6e-06 58.5 142 31.7
HPP92_009323 Vanilla planifolia HOM05D000240 ORTHO05D001153 6.1e-06 57.8 238 23.5
MELO3C009259.2 Cucumis melo HOM05D000108 ORTHO05D002946 8.0e-06 57.4 81 35.8
CsaV3_3G034910 Cucumis sativus L. HOM05D000108 ORTHO05D002946 8.0e-06 57.4 81 35.8


User provided reference genes

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