Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003246g0060 Nicotiana tabacum HOM05D008139 ORTHO05D009872 8.5e-91 337.0 176 100.0
Nitab4.5_0000110g0510 Nicotiana tabacum HOM05D008139 ORTHO05D009872 1.3e-70 270.0 176 84.1
Peaxi162Scf00057g00045 Petunia axillaris HOM05D008139 ORTHO05D009872 1.1e-29 134.0 116 66.4
PGSC0003DMG400005169 Solanum tuberosum HOM05D008139 ORTHO05D009872 1.1e-29 134.0 172 49.4
CAN.G1126.30 Capsicum annuum HOM05D008139 ORTHO05D009872 3.2e-29 132.5 142 57.7
Solyc04g080070.1 Solanum lycopersicum HOM05D008139 ORTHO05D009872 6.0e-28 128.3 201 42.8
Sopen04g033660 Solanum pennellii HOM05D008139 ORTHO05D009872 2.3e-27 126.3 208 41.3
CAN.G1139.6 Capsicum annuum HOM05D008139 ORTHO05D009872 1.9e-18 96.7 85 55.3
PGSC0003DMG400045933 Solanum tuberosum HOM05D008139 ORTHO05D009872 4.8e-17 92.0 80 56.2
Nitab4.5_0000790g0110 Nicotiana tabacum HOM05D008139 ORTHO05D009872 6.2e-17 91.7 123 44.7
Hma1.2p1_0249F.1_g102430 Hydrangea macrophylla HOM05D008139 ORTHO05D009872 1.4e-16 90.5 82 58.5
Nitab4.5_0002296g0050 Nicotiana tabacum HOM05D008139 ORTHO05D009872 6.9e-16 88.2 83 53.0
Duzib133G0708 Durio zibethinus HOM05D008139 ORTHO05D009872 9.9e-15 84.3 84 52.4
Thecc.04G120400 Theobroma cacao HOM05D008139 ORTHO05D009872 9.9e-15 84.3 84 53.6
CSS0007440 Camellia sinensis var. sinensis HOM05D008139 ORTHO05D009872 2.2e-14 83.2 76 59.2
Lsat_1_v5_gn_8_128280 Lactuca sativa HOM05D008139 ORTHO05D009872 2.2e-14 83.2 81 54.3
Potri.017G037500 Populus trichocarpa HOM05D008139 ORTHO05D009872 2.2e-14 83.2 77 57.1
Solyc12g089070.1 Solanum lycopersicum HOM05D008139 ORTHO05D009872 2.9e-14 82.8 95 47.4
Lsat_1_v5_gn_5_103860 Lactuca sativa HOM05D008139 ORTHO05D009872 3.8e-14 82.4 76 57.9
SGA_v2.0_scaffold374G50235 Striga asiatica HOM05D008139 ORTHO05D009872 4.9e-14 82.0 111 41.4
TWI36G0135 Tripterygium wilfordii HOM05D008139 ORTHO05D009872 4.9e-14 82.0 80 53.8
CSS0007820 Camellia sinensis var. sinensis HOM05D008139 ORTHO05D009872 6.4e-14 81.6 87 52.9
Lj3g0004995 Lotus japonicus HOM05D008139 ORTHO05D009872 8.4e-14 81.3 97 51.5
Lalb_Chr03g0028851 Lupinus albus HOM05D008139 ORTHO05D009872 8.4e-14 81.3 77 55.8
Phvul.011G105800 Phaseolus vulgaris HOM05D008139 ORTHO05D009872 1.4e-13 80.5 77 51.9
Cfa014432 Carpinus fangiana HOM05D008139 ORTHO05D009872 1.9e-13 80.1 77 55.8
Potri.007G122500 Populus trichocarpa HOM05D008139 ORTHO05D009872 3.2e-13 79.3 89 50.6
Cc10_g03180 Coffea canephora HOM05D008139 ORTHO05D009872 4.2e-13 79.0 76 53.9
Prupe.3G131300 Prunus persica HOM05D008139 ORTHO05D009872 9.3e-13 77.8 80 53.8
RcHm_v2.0_Chr2g0126901 Rosa chinensis HOM05D008139 ORTHO05D009872 1.2e-12 77.4 92 51.1
SalBow8G2406 Salvia bowleyana HOM05D008139 ORTHO05D009872 1.2e-12 77.4 121 43.0
SalBow8G2479 Salvia bowleyana HOM05D008139 ORTHO05D009872 1.2e-12 77.4 121 43.0
Gohir.D11G168166 Gossypium hirsutum HOM05D008139 ORTHO05D009872 1.6e-12 77.0 78 52.6
Gorai.007G179600 Gossypium raimondii HOM05D008139 ORTHO05D009872 1.6e-12 77.0 78 52.6
SGA_v2.0_scaffold48G18067 Striga asiatica HOM05D008139 ORTHO05D009872 2.1e-12 76.6 82 47.6
Nn1g07030 Nelumbo nucifera HOM05D008139 ORTHO05D009872 2.7e-12 76.3 76 55.3
Rhsim06G0158900 Rhododendron simsii HOM05D008139 ORTHO05D009872 2.7e-12 76.3 74 56.8
Medtr4g046720 Medicago truncatula HOM05D008139 ORTHO05D009872 3.5e-12 75.9 77 51.9
DCAR_019772 Daucus carota HOM05D008139 ORTHO05D009872 4.6e-12 75.5 76 53.9
Atru.chr6.3155 Acer truncatum HOM05D008139 ORTHO05D009872 6.0e-12 75.1 80 46.2
Dinv02745 Davidia involucrata HOM05D008139 ORTHO05D009872 6.0e-12 75.1 66 60.6
Migut.C00700 Erythranthe guttata HOM05D008139 ORTHO05D009872 6.0e-12 75.1 90 46.7
QL08p033688 Quercus lobata HOM05D008139 ORTHO05D009872 6.0e-12 75.1 77 54.5
Ciclev10017826m.g Citrus clementina HOM05D008139 ORTHO05D009872 7.9e-12 74.7 78 52.6
FAN02G4280 Fragaria x ananassa HOM05D008139 ORTHO05D009872 1.0e-11 74.3 79 54.4
MD07G1098300 Malus domestica HOM05D008139 ORTHO05D009872 1.3e-11 73.9 81 53.1
TWI75G0563 Tripterygium wilfordii HOM05D008139 ORTHO05D009872 1.3e-11 73.9 86 48.8
COL.COLO4_15724 Corchorus olitorius HOM05D008139 ORTHO05D009872 1.8e-11 73.6 89 43.8
Gohir.A11G161900 Gossypium hirsutum HOM05D008139 ORTHO05D009872 1.8e-11 73.6 78 51.3
TPR.G19049 Trifolium pratense HOM05D008139 ORTHO05D009872 3.0e-11 72.8 84 50.0
TAR626G0598 Trochodendron aralioides HOM05D008139 ORTHO05D009872 3.0e-11 72.8 73 52.1
Manes.13G103000 Manihot esculenta HOM05D008139 ORTHO05D009872 6.7e-11 71.6 84 48.8
Sed0019249 Sechium edule HOM05D008139 ORTHO05D009872 8.7e-11 71.2 89 42.7
ClCG02G001810 Citrullus lanatus HOM05D008139 ORTHO05D009872 1.1e-10 70.9 87 44.8
Sabra17G0024400 Salix brachista HOM05D008139 ORTHO05D009872 1.1e-10 70.9 78 48.7
Prupe.2G122300 Prunus persica HOM05D008139 ORTHO05D009872 1.5e-10 70.5 92 47.8
Atru.chr6.3157 Acer truncatum HOM05D008139 ORTHO05D009872 1.9e-10 70.1 87 43.7
Glyma.12G100900 Glycine max HOM05D008139 ORTHO05D009872 1.9e-10 70.1 77 53.2
CiPaw.04G117200 Carya illinoinensis HOM05D008139 ORTHO05D009872 1.3e-09 67.4 96 44.8
TAR626G0589 Trochodendron aralioides HOM05D008139 ORTHO05D009872 1.3e-09 67.4 73 47.9
unitig_46.g17928 Utricularia gibba HOM05D008139 ORTHO05D009872 2.1e-09 66.6 79 44.3
PGR083G1842 Punica granatum HOM05D008139 ORTHO05D009872 3.7e-09 65.9 134 37.3
CARHR126180 Cardamine hirsuta HOM05D011011 ORTHO05D009872 1.8e-08 63.5 81 45.7
Migut.N00505 Erythranthe guttata HOM05D008139 ORTHO05D009872 3.1e-08 62.8 105 40.0
MELO3C018806.2 Cucumis melo HOM05D008139 ORTHO05D009872 5.3e-08 62.0 90 40.0
CsaV3_7G003730 Cucumis sativus L. HOM05D008139 ORTHO05D009872 1.5e-07 60.5 92 38.0
Eucgr.A01721 Eucalyptus grandis HOM05D008139 ORTHO05D009872 2.0e-07 60.1 88 45.5
Aqoxy4G01991 Aquilegia oxysepala HOM05D008139 ORTHO05D009872 3.4e-07 59.3 73 43.8
Potri.017G037400 Populus trichocarpa HOM05D008139 ORTHO05D009872 7.6e-07 58.2 66 43.9
C04p61740 Brassica napus HOM05D011011 ORTHO05D009872 4.9e-06 55.5 101 37.6
THA.LOC104816105 Tarenaya hassleriana HOM05D011011 ORTHO05D009872 4.9e-06 55.5 115 40.0
BcaC02g07938 Brassica carinata HOM05D011011 ORTHO05D009872 6.4e-06 55.1 101 37.6
BolC4t27657H Brassica oleracea HOM05D011011 ORTHO05D009872 8.4e-06 54.7 101 36.6


User provided reference genes

Program Settings