Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003244g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.3e-78 295.4 141 100.0
Nitab4.5_0002082g0020 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.8e-33 145.2 84 83.3
Nitab4.5_0002698g0150 Nicotiana tabacum HOM05D007931 ORTHO05D010331 9.3e-32 140.6 88 78.4
Nitab4.5_0004037g0020 Nicotiana tabacum HOM05D007931 ORTHO05D010331 6.1e-31 137.9 118 56.8
Nitab4.5_0000760g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.4e-27 126.7 69 87.0
Nitab4.5_0003434g0110 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.4e-27 125.9 71 83.1
Nitab4.5_0007096g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.1e-27 125.2 139 43.2
Nitab4.5_0005843g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.0e-26 122.9 125 44.0
PGSC0003DMG400030025 Solanum tuberosum HOM05D007931 ORTHO05D010331 7.7e-26 120.9 125 42.4
Nitab4.5_0002199g0040 Nicotiana tabacum HOM05D007931 ORTHO05D010331 6.5e-25 117.9 113 46.9
Nitab4.5_0002239g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.6e-23 111.7 69 82.6
Nitab4.5_0009159g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.6e-23 111.7 84 70.2
Nitab4.5_0004512g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.6e-18 95.9 101 43.6
Nitab4.5_0002837g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.5e-16 89.4 104 39.4
PGSC0003DMG400030140 Solanum tuberosum HOM05D007931 ORTHO05D010331 2.5e-16 89.4 80 47.5
Nitab4.5_0001840g0090 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.2e-16 89.0 80 46.2
Nitab4.5_0000128g0350 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.6e-15 86.7 84 48.8
Nitab4.5_0013264g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.6e-15 85.5 80 46.2
Nitab4.5_0000871g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.8e-14 83.2 85 44.7
Nitab4.5_0002433g0100 Nicotiana tabacum HOM05D007931 ORTHO05D010331 5.2e-14 81.6 80 42.5
Nitab4.5_0000265g0090 Nicotiana tabacum HOM05D007931 ORTHO05D010331 6.3e-12 74.7 85 41.2
Nitab4.5_0003161g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 9.1e-11 70.9 60 55.0
Sopen10g023470 Solanum pennellii HOM05D007931 ORTHO05D010331 1.2e-10 70.5 77 44.2
Nitab4.5_0000075g0220 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.5e-10 68.9 71 45.1
Nitab4.5_0006590g0040 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.0e-09 67.4 68 50.0
Nitab4.5_0010978g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.3e-09 67.0 36 91.7
EL10Ac5g12187 Beta vulgaris HOM05D000003 ORTHO05D000006 1.7e-09 66.6 123 29.3
Cc04_g14660 Coffea canephora HOM05D000003 ORTHO05D000167 1.7e-09 66.6 125 31.2
Nitab4.5_0008257g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.7e-09 66.6 66 43.9
Nitab4.5_0005181g0020 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.8e-09 65.5 60 48.3
Sopen02g028840 Solanum pennellii HOM05D007931 ORTHO05D010331 5.0e-09 65.1 60 48.3
Ah.12g061120 Amaranthus hybridus HOM05D000003 ORTHO05D000167 6.5e-09 64.7 123 26.0
Atru.chr2.1933 Acer truncatum HOM05D000003 ORTHO05D000004 8.5e-09 64.3 96 35.4
Atru.chr10.149 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-08 63.9 114 32.5
Nitab4.5_0001297g0070 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.1e-08 63.9 68 44.1
EL10Ac7g17531 Beta vulgaris HOM05D000003 ORTHO05D000004 1.9e-08 63.2 118 28.0
Atru.chr2.2051 Acer truncatum HOM05D000003 ORTHO05D000167 3.2e-08 62.4 79 34.2
BraA08t33512Z Brassica rapa HOM05D001239 ORTHO05D000925 3.2e-08 62.4 105 33.3
Sed0026194 Sechium edule HOM05D000003 ORTHO05D000167 3.2e-08 62.4 114 26.3
Atru.chr2.176 Acer truncatum HOM05D000003 ORTHO05D000167 4.2e-08 62.0 97 33.0
Atru.chr2.2049 Acer truncatum HOM05D000003 ORTHO05D000004 4.2e-08 62.0 99 34.3
Atru.chr4.1218 Acer truncatum HOM05D000003 ORTHO05D000167 4.2e-08 62.0 97 34.0
EL10Ac7g16695 Beta vulgaris HOM05D000003 ORTHO05D000006 5.5e-08 61.6 123 27.6
Hund17128 Selenicereus undatus HOM05D000003 ORTHO05D000022 5.5e-08 61.6 91 31.9
Nitab4.5_0008942g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 7.2e-08 61.2 60 45.0
Atru.chr13.1628 Acer truncatum HOM05D000003 ORTHO05D000167 9.4e-08 60.8 96 33.3
Nitab4.5_0001005g0120 Nicotiana tabacum HOM05D007931 ORTHO05D010331 9.4e-08 60.8 53 50.9
Prupe.2G133200 Prunus persica HOM05D027201 ORTHO05D008897 9.4e-08 60.8 114 35.1
Atru.chr3.1147 Acer truncatum HOM05D000003 ORTHO05D000167 1.2e-07 60.5 96 33.3
Sed0017704 Sechium edule HOM05D000003 ORTHO05D000167 1.6e-07 60.1 121 29.8
Atru.chr7.1139 Acer truncatum HOM05D000003 ORTHO05D000167 2.1e-07 59.7 121 30.6
CANSAT64G1779 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-07 59.7 124 29.0
Nitab4.5_0000115g0320 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.1e-07 59.7 36 83.3
Atru.chr13.2074 Acer truncatum HOM05D000003 ORTHO05D000167 2.7e-07 59.3 98 34.7
Atru.chr9.887 Acer truncatum HOM05D000003 ORTHO05D000006 2.7e-07 59.3 96 33.3
EL10Ac4g10128 Beta vulgaris HOM05D004808 ORTHO05D005279 2.7e-07 59.3 114 30.7
Atru.chr7.1503 Acer truncatum HOM05D000003 ORTHO05D000006 3.6e-07 58.9 96 35.4
EL10As6g23665 Beta vulgaris HOM05D000003 ORTHO05D000167 3.6e-07 58.9 96 29.2
Nitab4.5_0003766g0040 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.6e-07 58.9 60 43.3
Nitab4.5_0010531g0070 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.6e-07 58.9 94 33.0
Sed0013469 Sechium edule HOM05D000003 ORTHO05D000167 3.6e-07 58.9 100 30.0
Atru.chr1.2765 Acer truncatum HOM05D000003 ORTHO05D000004 4.7e-07 58.5 97 34.0
Atru.chr13.1170 Acer truncatum HOM05D000003 ORTHO05D000167 4.7e-07 58.5 96 32.3
Atru.chr8.899 Acer truncatum HOM05D000003 ORTHO05D000004 4.7e-07 58.5 96 34.4
BolC4t23673H Brassica oleracea HOM05D001239 ORTHO05D000925 4.7e-07 58.5 113 30.1
Haze_27263 Corylus avellana HOM05D000003 ORTHO05D000167 4.7e-07 58.5 114 28.1
Nitab4.5_0005933g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.7e-07 58.5 63 42.9
Hma1.2p1_0035F.1_g021825 Hydrangea macrophylla HOM05D000003 ORTHO05D000004 6.1e-07 58.2 119 30.3
Lj1P289T15 Lonicera japonica HOM05D008183 ORTHO05D007254 6.1e-07 58.2 98 29.6
Atru.chr2.2033 Acer truncatum HOM05D000003 ORTHO05D000167 8.0e-07 57.8 98 33.7
BcaC08g46847 Brassica carinata HOM05D000496 ORTHO05D000411 8.0e-07 57.8 102 32.4
PSO447G0228 Papaver somniferum HOM05D003407 ORTHO05D001026 8.0e-07 57.8 126 30.2
Atru.chr1.763 Acer truncatum HOM05D000003 ORTHO05D000004 1.0e-06 57.4 116 31.0
Atru.chr6.1288 Acer truncatum HOM05D000003 ORTHO05D000004 1.0e-06 57.4 97 32.0
Ah.02g115360 Amaranthus hybridus HOM05D003152 ORTHO05D004094 1.0e-06 57.4 102 29.4
EL10Ac6g14087 Beta vulgaris HOM05D000003 ORTHO05D000167 1.0e-06 57.4 114 29.8
EL10Ac9g22665 Beta vulgaris HOM05D000003 ORTHO05D000167 1.0e-06 57.4 114 27.2
BolC3t15491H Brassica oleracea HOM05D001239 ORTHO05D000925 1.0e-06 57.4 93 32.3
FvH4_4g17203 Fragaria vesca HOM05D000003 ORTHO05D000022 1.0e-06 57.4 96 28.1
Lju110C5T8 Lonicera japonica HOM05D008183 ORTHO05D007254 1.0e-06 57.4 108 30.6
SGA_v2.0_scaffold130G34315 Striga asiatica HOM05D000003 ORTHO05D000004 1.0e-06 57.4 117 34.2
TAR628G0770 Trochodendron aralioides HOM05D009417 ORTHO05D011990 1.0e-06 57.4 85 40.0
Atru.chr10.672 Acer truncatum HOM05D000003 ORTHO05D000167 1.4e-06 57.0 97 33.0
AL8G23160 Arabidopsis lyrata HOM05D001239 ORTHO05D000925 1.4e-06 57.0 85 35.3
BolC5t34840H Brassica oleracea HOM05D001239 ORTHO05D000925 1.4e-06 57.0 110 28.2
FvH4_2g00771 Fragaria vesca HOM05D000003 ORTHO05D000022 1.4e-06 57.0 97 32.0
PSO832G3082 Papaver somniferum HOM05D007919 ORTHO05D006738 1.4e-06 57.0 117 31.6
TAR625G0935 Trochodendron aralioides HOM05D005595 ORTHO05D006962 1.4e-06 57.0 90 37.8
BolC9t55688H Brassica oleracea HOM05D001239 ORTHO05D000925 1.8e-06 56.6 98 30.6
AUR62034867 Chenopodium quinoa HOM05D000003 ORTHO05D000167 1.8e-06 56.6 100 29.0
FvH4_5g33393 Fragaria vesca HOM05D000003 ORTHO05D006737 1.8e-06 56.6 100 29.0
Lj2C65T12 Lonicera japonica HOM05D008183 ORTHO05D007254 1.8e-06 56.6 99 30.3
Nitab4.5_0003063g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.8e-06 56.6 58 43.1
RcHm_v2.0_Chr3g0488841 Rosa chinensis HOM05D000003 ORTHO05D011454 1.8e-06 56.6 125 26.4
Atru.chr11.1019 Acer truncatum HOM05D000003 ORTHO05D000167 2.3e-06 56.2 96 31.2
Atru.chr11.1731 Acer truncatum HOM05D000003 ORTHO05D000167 2.3e-06 56.2 97 33.0
EL10Ac4g09190 Beta vulgaris HOM05D000003 ORTHO05D000167 2.3e-06 56.2 120 29.2
BolC1t05766H Brassica oleracea HOM05D001239 ORTHO05D000925 2.3e-06 56.2 86 34.9
BolC8t50916H Brassica oleracea HOM05D001239 ORTHO05D000925 2.3e-06 56.2 98 30.6
Solyc11g068410.1 Solanum lycopersicum HOM05D007931 ORTHO05D010331 2.3e-06 56.2 60 38.3
Atru.chr9.643 Acer truncatum HOM05D000003 ORTHO05D000167 3.0e-06 55.8 81 35.8
BolC5t33856H Brassica oleracea HOM05D001239 ORTHO05D000925 3.0e-06 55.8 91 34.1
BolC6t35664H Brassica oleracea HOM05D008653 ORTHO05D000925 3.0e-06 55.8 92 38.0
BraA07t29530Z Brassica rapa HOM05D001239 ORTHO05D000925 3.0e-06 55.8 100 31.0
Hund22573 Selenicereus undatus HOM05D000003 ORTHO05D000022 3.0e-06 55.8 87 31.0
Solyc04g063330.1 Solanum lycopersicum HOM05D007931 ORTHO05D010331 3.0e-06 55.8 59 42.4
Atru.chr10.544 Acer truncatum HOM05D000003 ORTHO05D000004 4.0e-06 55.5 96 34.4
Atru.chr6.242 Acer truncatum HOM05D000003 ORTHO05D000006 4.0e-06 55.5 96 32.3
BcaB02g09878 Brassica carinata HOM05D000496 ORTHO05D000411 4.0e-06 55.5 100 33.0
FvH4_4g07171 Fragaria vesca HOM05D008833 ORTHO05D012679 4.0e-06 55.5 119 29.4
LjContig00408g0023232 Lotus japonicus HOM05D000003 ORTHO05D000004 4.0e-06 55.5 80 36.2
PSO478G4994 Papaver somniferum HOM05D007919 ORTHO05D006738 4.0e-06 55.5 106 27.4
Sp4g05790 Schrenkiella parvula HOM05D001239 ORTHO05D000925 4.0e-06 55.5 92 32.6
Atru.chr10.114 Acer truncatum HOM05D000003 ORTHO05D000167 5.2e-06 55.1 97 32.0
Atru.chr10.97 Acer truncatum HOM05D000003 ORTHO05D000167 5.2e-06 55.1 97 32.0
Atru.chr13.1037 Acer truncatum HOM05D000003 ORTHO05D000167 5.2e-06 55.1 96 32.3
AUR62020673 Chenopodium quinoa HOM05D000003 ORTHO05D000167 5.2e-06 55.1 118 29.7
Haze_12823 Corylus avellana HOM05D016039 ORTHO05D000167 5.2e-06 55.1 103 30.1
Atru.chr1.1791 Acer truncatum HOM05D000003 ORTHO05D000167 6.7e-06 54.7 96 32.3
Atru.chr7.130 Acer truncatum HOM05D000003 ORTHO05D000126 6.7e-06 54.7 96 29.2
Atru.chr8.822 Acer truncatum HOM05D000003 ORTHO05D000167 6.7e-06 54.7 96 30.2
BolC4t25971H Brassica oleracea HOM05D001239 ORTHO05D000925 6.7e-06 54.7 98 31.6
TAR633G0584 Trochodendron aralioides HOM05D031684 ORTHO05D037808 6.7e-06 54.7 102 31.4
Atru.chr8.67 Acer truncatum HOM05D000003 ORTHO05D000167 8.8e-06 54.3 97 32.0
Atru.chr9.1010 Acer truncatum HOM05D000003 ORTHO05D000167 8.8e-06 54.3 96 30.2
EL10Ac2g03044 Beta vulgaris HOM05D000003 ORTHO05D000006 8.8e-06 54.3 97 29.9
FvH4_3g19950 Fragaria vesca HOM05D002732 ORTHO05D002955 8.8e-06 54.3 97 26.8
PSO170G1593 Papaver somniferum HOM05D007919 ORTHO05D006738 8.8e-06 54.3 107 32.7


User provided reference genes

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