Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003237g0010 Nicotiana tabacum HOM05D006182 ORTHO05D007236 8.5e-111 403.7 202 100.0
Nitab4.5_0001611g0140 Nicotiana tabacum HOM05D006182 ORTHO05D007236 1.3e-103 379.8 202 95.5
CAN.G210.12 Capsicum annuum HOM05D006182 ORTHO05D007236 7.5e-83 310.8 202 77.2
PGSC0003DMG400031482 Solanum tuberosum HOM05D006182 ORTHO05D007236 1.1e-78 297.0 202 75.7
Solyc12g062480.3 Solanum lycopersicum HOM05D006182 ORTHO05D007236 3.6e-77 292.0 202 74.3
Sopen07g009980 Solanum pennellii HOM05D006182 ORTHO05D007236 1.0e-76 290.4 202 73.8
Sopen12g025610 Solanum pennellii HOM05D006182 ORTHO05D007236 1.4e-76 290.0 202 73.8
Oeu033637.2 Olea europaea HOM05D006182 ORTHO05D007236 1.8e-44 183.3 195 52.3
Cc00_g16120 Coffea canephora HOM05D006182 ORTHO05D007236 4.8e-37 158.7 202 46.0
Actinidia22605 Actinidia chinensis HOM05D006182 ORTHO05D007236 6.2e-37 158.3 199 46.2
ECA232G1194 Erigeron canadensis HOM05D006182 ORTHO05D007236 2.4e-36 156.4 193 43.5
vmacro21568 Vaccinium macrocarpon HOM05D006182 ORTHO05D007236 6.9e-36 154.8 177 46.9
MSTRG.25113 Avicennia marina HOM05D006182 ORTHO05D007236 7.6e-35 151.4 177 45.2
HanXRQChr09g0268131 Helianthus annuus HOM05D006182 ORTHO05D007236 1.3e-34 150.6 180 45.0
MBI16_g27588_MAGBIO Magnolia biondii HOM05D006182 ORTHO05D007236 2.2e-34 149.8 179 42.5
GSVIVG01009571001 Vitis vinifera HOM05D006182 ORTHO05D007236 2.2e-34 149.8 200 42.0
SalBow7G1322 Salvia bowleyana HOM05D006182 ORTHO05D007236 1.9e-33 146.7 175 46.3
RcHm_v2.0_Chr7g0224651 Rosa chinensis HOM05D006182 ORTHO05D007236 5.4e-33 145.2 181 44.2
Atru.chr13.613 Acer truncatum HOM05D006182 ORTHO05D007236 2.1e-32 143.3 198 41.4
Prupe.1G390200 Prunus persica HOM05D006182 ORTHO05D007236 3.5e-32 142.5 194 41.8
Rhsim06G0045000 Rhododendron simsii HOM05D006182 ORTHO05D007236 3.5e-32 142.5 166 49.4
Manes.05G170000 Manihot esculenta HOM05D006182 ORTHO05D007236 6.0e-32 141.7 200 38.0
MD08G1060500 Malus domestica HOM05D006182 ORTHO05D007236 7.8e-32 141.4 183 42.1
FvH4_5g30300 Fragaria vesca HOM05D006182 ORTHO05D007236 1.0e-31 141.0 199 40.7
Sc15g0006450 Simmondsia chinensis HOM05D006182 ORTHO05D007236 2.3e-31 139.8 176 43.8
FAN18G2601 Fragaria x ananassa HOM05D006182 ORTHO05D007236 3.0e-31 139.4 199 40.2
FAN08G0368 Fragaria x ananassa HOM05D006182 ORTHO05D007236 3.9e-31 139.0 189 41.8
Lj4A50G37 Lonicera japonica HOM05D006182 ORTHO05D007236 1.1e-30 137.5 179 43.6
Duzib093G2194 Durio zibethinus HOM05D006182 ORTHO05D007236 2.5e-30 136.3 182 42.9
Aqoxy2G01750 Aquilegia oxysepala HOM05D006182 ORTHO05D007236 3.3e-30 136.0 174 42.0
TWI56G0571 Tripterygium wilfordii HOM05D006182 ORTHO05D007236 4.3e-30 135.6 200 41.0
Ah.05g168900 Amaranthus hybridus HOM05D006182 ORTHO05D007236 7.3e-30 134.8 180 46.1
SGA_v2.0_scaffold217G42430 Striga asiatica HOM05D006182 ORTHO05D007236 1.6e-29 133.7 174 43.7
Migut.C00612 Erythranthe guttata HOM05D006182 ORTHO05D007236 2.1e-29 133.3 176 41.5
AUR62031379 Chenopodium quinoa HOM05D006182 ORTHO05D007236 2.8e-29 132.9 176 42.6
DCAR_012766 Daucus carota HOM05D006182 ORTHO05D007236 5.3e-28 128.6 179 45.3
Sabra02G0101100 Salix brachista HOM05D006182 ORTHO05D007236 5.3e-28 128.6 173 42.8
CANSAT64G1322 Cannabis sativa HOM05D006182 ORTHO05D007236 2.0e-27 126.7 200 36.0
Hund17608 Selenicereus undatus HOM05D006182 ORTHO05D007236 4.5e-27 125.6 179 38.5
Solyc07g021115.1 Solanum lycopersicum HOM05D006182 ORTHO05D007236 5.8e-27 125.2 79 78.5
Nn6g32369 Nelumbo nucifera HOM05D006182 ORTHO05D007236 9.9e-27 124.4 194 36.1
Cfa018501 Carpinus fangiana HOM05D006182 ORTHO05D007236 1.3e-26 124.0 181 42.5
Potri.002G129000 Populus trichocarpa HOM05D006182 ORTHO05D007236 1.3e-26 124.0 190 38.9
Haze_17575 Corylus avellana HOM05D006182 ORTHO05D007236 1.7e-26 123.6 178 43.3
COL.COLO4_26443 Corchorus olitorius HOM05D006182 ORTHO05D007236 4.9e-26 122.1 180 40.0
CsaV3_4G034020 Cucumis sativus L. HOM05D006182 ORTHO05D007236 7.1e-25 118.2 194 38.7
Gohir.A05G016750 Gossypium hirsutum HOM05D006182 ORTHO05D007236 9.3e-25 117.9 199 38.2
Glyma.08G236800 Glycine max HOM05D006182 ORTHO05D007236 1.6e-24 117.1 198 39.4
Psat4g135680 Pisum sativum HOM05D006182 ORTHO05D007236 2.1e-24 116.7 198 36.4
EL10Ac1g01812 Beta vulgaris HOM05D006182 ORTHO05D007236 3.5e-24 115.9 149 44.3
Gohir.D05G017700 Gossypium hirsutum HOM05D006182 ORTHO05D007236 3.5e-24 115.9 199 37.7
Gorai.009G018100 Gossypium raimondii HOM05D006182 ORTHO05D007236 3.5e-24 115.9 199 37.7
CiPaw.15G064200 Carya illinoinensis HOM05D006182 ORTHO05D007236 1.0e-23 114.4 179 40.2
PSO541G3468 Papaver somniferum HOM05D006182 ORTHO05D007236 1.3e-23 114.0 192 38.0
QL02p006174 Quercus lobata HOM05D006182 ORTHO05D007236 5.1e-23 112.1 200 35.0
PGR031G1311 Punica granatum HOM05D006182 ORTHO05D007236 4.3e-22 109.0 182 37.9
arahy.Tifrunner.gnm1.ann1.I266YZ Arachis hypogaea HOM05D006182 ORTHO05D007236 1.3e-21 107.5 183 35.5
PSO675G0403 Papaver somniferum HOM05D006182 ORTHO05D007236 1.3e-21 107.5 189 36.5
TPR.G9412 Trifolium pratense HOM05D006182 ORTHO05D007236 1.3e-21 107.5 197 34.5
MELO3C032401.2 Cucumis melo HOM05D006182 ORTHO05D007236 1.6e-21 107.1 189 34.4
Lalb_Chr04g0264181 Lupinus albus HOM05D006182 ORTHO05D007236 2.1e-21 106.7 199 33.2
Lsat_1_v5_gn_4_124380 Lactuca sativa HOM05D006182 ORTHO05D007236 3.7e-21 105.9 183 36.1
ATR0225G007 Amborella trichopoda HOM05D006182 ORTHO05D007236 3.1e-20 102.8 171 36.8
arahy.Tifrunner.gnm1.ann1.903WAW Arachis hypogaea HOM05D006182 ORTHO05D007236 1.2e-19 100.9 183 34.4
Sed0017871 Sechium edule HOM05D006182 ORTHO05D007236 7.6e-19 98.2 183 36.6
unitig_8.g5014 Utricularia gibba HOM05D006182 ORTHO05D007236 7.6e-19 98.2 180 37.2
Thecc.08G014800 Theobroma cacao HOM05D006182 ORTHO05D007236 1.3e-18 97.4 196 36.2
Thhalv10029299m.g Eutrema salsugineum HOM05D006182 ORTHO05D007236 1.7e-18 97.1 191 32.5
THA.LOC104816122 Tarenaya hassleriana HOM05D006182 ORTHO05D007236 1.1e-17 94.4 179 32.4
HPP92_010556 Vanilla planifolia HOM05D006182 ORTHO05D007236 1.1e-17 94.4 176 31.2
Lj3g0019378 Lotus japonicus HOM05D006182 ORTHO05D007236 2.1e-16 90.1 190 33.2
Ca_05108_v3 Cicer arietinum L. HOM05D006182 ORTHO05D007236 3.5e-16 89.4 170 32.9
SHI08237 Sapria himalayana HOM05D006182 ORTHO05D007236 3.0e-15 86.3 190 31.6
Zm00001eb311480 Zea mays HOM05D006182 ORTHO05D007236 3.0e-15 86.3 184 33.2
Carub.0006s2813 Capsella rubella HOM05D006182 ORTHO05D007236 8.7e-15 84.7 197 31.0
BraA09t38510Z Brassica rapa HOM05D006182 ORTHO05D007236 1.9e-14 83.6 188 30.9
AL6G43320 Arabidopsis lyrata HOM05D006182 ORTHO05D007236 2.5e-14 83.2 197 31.0
Peaxi162Scf00929g00711 Petunia axillaris HOM05D006182 ORTHO05D007236 2.5e-14 83.2 65 69.2
Aa31LG9G14980 Aethionema arabicum HOM05D006182 ORTHO05D007236 5.7e-14 82.0 185 29.2
A09p29430 Brassica napus HOM05D006182 ORTHO05D007236 5.7e-14 82.0 188 30.3
Phvul.011G175100 Phaseolus vulgaris HOM05D006182 ORTHO05D007236 5.7e-14 82.0 191 33.0
Sp6g07920 Schrenkiella parvula HOM05D006182 ORTHO05D007236 7.4e-14 81.6 188 29.8
C09p37620 Brassica napus HOM05D006182 ORTHO05D007236 9.6e-14 81.3 188 29.8
BolC9t56593H Brassica oleracea HOM05D006182 ORTHO05D007236 9.6e-14 81.3 188 29.8
BcaC04g20947 Brassica carinata HOM05D006182 ORTHO05D007236 1.3e-13 80.9 185 29.7
BcaB01g01419 Brassica carinata HOM05D006182 ORTHO05D007236 3.7e-13 79.3 185 29.7
Hma1.2p1_0951F.1_g240770 Hydrangea macrophylla HOM05D006182 ORTHO05D007236 4.1e-12 75.9 143 36.4
Ciclev10003312m.g Citrus clementina HOM05D006182 ORTHO05D007236 5.3e-12 75.5 118 40.7
ClCG05G019560 Citrullus lanatus HOM05D006182 ORTHO05D007236 1.0e-10 71.2 122 36.9
CDE02G1449 Ceratophyllum demersum HOM05D006182 ORTHO05D007236 3.8e-10 69.3 95 41.1
MBI16_g32432_MAGBIO Magnolia biondii HOM05D006182 ORTHO05D007236 4.6e-08 62.4 65 43.1
unitig_19.g30006 Utricularia gibba HOM05D006182 ORTHO05D007236 7.9e-08 61.6 156 32.7
SEGI_19792 Sequoiadendron giganteum HOM05D006182 ORTHO05D007236 1.9e-06 57.0 128 31.2


User provided reference genes

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