Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003230g0090 Nicotiana tabacum HOM05D007579 ORTHO05D000285 4.2e-181 637.9 317 100.0
Nitab4.5_0000915g0040 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.7e-95 352.8 282 69.1
Nitab4.5_0000506g0250 Nicotiana tabacum HOM05D007579 ORTHO05D000285 3.5e-95 352.4 248 76.6
Nitab4.5_0002600g0030 Nicotiana tabacum HOM05D007579 ORTHO05D000285 9.6e-93 344.4 253 73.5
Nitab4.5_0000297g0280 Nicotiana tabacum HOM05D007579 ORTHO05D000285 6.2e-84 315.1 253 67.6
Nitab4.5_0020090g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.0e-74 283.5 221 69.7
Nitab4.5_0001611g0070 Nicotiana tabacum HOM05D007579 ORTHO05D000285 9.6e-69 264.6 210 69.0
Nitab4.5_0028034g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.1e-68 263.5 206 68.0
Nitab4.5_0000062g0080 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.5e-61 240.7 256 57.0
Nitab4.5_0008299g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.3e-60 237.7 163 78.5
Solyc10g049530.3 Solanum lycopersicum HOM05D000034 ORTHO05D000037 3.2e-56 223.0 322 42.9
Nitab4.5_0006822g0050 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.7e-49 200.7 155 73.5
Nitab4.5_0001872g0050 Nicotiana tabacum HOM05D007579 ORTHO05D014074 4.7e-47 192.6 158 65.2
Nitab4.5_0000072g0050 Nicotiana tabacum HOM05D007579 ORTHO05D014074 1.8e-46 190.7 141 69.5
Nitab4.5_0005324g0060 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.3e-46 190.3 258 46.9
Peaxi162Scf00002g02220 Petunia axillaris HOM05D000876 ORTHO05D000285 2.6e-45 186.8 293 39.9
Nitab4.5_0001614g0210 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.8e-44 183.3 128 78.1
Nitab4.5_0002432g0060 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.3e-41 174.5 214 50.0
Nitab4.5_0005587g0100 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.7e-39 166.8 268 40.3
Nitab4.5_0000545g0010 Nicotiana tabacum HOM05D007579 ORTHO05D014074 8.0e-39 165.2 151 58.9
Nitab4.5_0012930g0020 Nicotiana tabacum HOM05D007579 ORTHO05D000285 3.0e-38 163.3 115 74.8
Nitab4.5_0001796g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 5.7e-37 159.1 260 43.5
Nitab4.5_0003708g0020 Nicotiana tabacum HOM05D007579 ORTHO05D000285 4.8e-36 156.0 115 73.0
PGSC0003DMG400041016 Solanum tuberosum HOM05D007579 ORTHO05D000285 3.1e-35 153.3 195 44.6
Nitab4.5_0002356g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 9.1e-35 151.8 278 37.4
Nitab4.5_0000212g0300 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.5e-32 144.4 144 60.4
Peaxi162Scf00174g00006 Petunia axillaris HOM05D007579 ORTHO05D000285 2.6e-29 133.7 153 48.4
PGSC0003DMG400037326 Solanum tuberosum HOM05D007579 ORTHO05D000285 1.7e-28 131.0 169 47.3
Nitab4.5_0014138g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.8e-28 130.2 269 34.9
Nitab4.5_0002535g0050 Nicotiana tabacum HOM05D007579 ORTHO05D000285 5.9e-26 122.5 132 53.0
Peaxi162Scf00593g00324 Petunia axillaris HOM05D007579 ORTHO05D000285 1.7e-25 120.9 225 37.8
Nitab4.5_0002745g0020 Nicotiana tabacum HOM05D007579 ORTHO05D000285 3.2e-24 116.7 203 38.9
Nitab4.5_0012419g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.2e-23 114.8 121 48.8
Nitab4.5_0000038g0120 Nicotiana tabacum HOM05D007579 ORTHO05D000285 3.6e-23 113.2 173 43.4
Nitab4.5_0000072g0060 Nicotiana tabacum HOM05D000876 ORTHO05D000285 6.8e-22 109.0 59 88.1
Solyc12g039050.3 Solanum lycopersicum HOM05D000876 ORTHO05D000285 1.5e-21 107.8 186 38.7
Nitab4.5_0002588g0030 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.0e-21 107.5 139 45.3
Nitab4.5_0001614g0220 Nicotiana tabacum HOM05D007579 ORTHO05D014074 1.1e-19 101.7 57 78.9
Nitab4.5_0000545g0020 Nicotiana tabacum HOM05D007579 ORTHO05D000285 4.1e-19 99.8 59 83.1
Peaxi162Scf00973g00320 Petunia axillaris HOM05D007579 ORTHO05D000285 2.7e-18 97.1 150 46.0
Nitab4.5_0002414g0020 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.0e-17 95.1 159 41.5
Peaxi162Scf00042g02110 Petunia axillaris HOM05D007579 ORTHO05D000285 2.1e-15 87.4 129 42.6
Nitab4.5_0000059g0630 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.8e-15 87.0 135 39.3
Nitab4.5_0000369g0070 Nicotiana tabacum HOM05D007579 ORTHO05D014074 8.0e-15 85.5 114 49.1
Nitab4.5_0007287g0060 Nicotiana tabacum HOM05D007579 ORTHO05D000285 8.0e-15 85.5 121 43.0
Nitab4.5_0003500g0030 Nicotiana tabacum HOM05D007579 ORTHO05D000037 1.0e-14 85.1 231 31.6
Nitab4.5_0002507g0110 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.4e-14 84.7 139 41.7
Nitab4.5_0000287g0210 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.8e-14 84.3 157 40.1
Nitab4.5_0003679g0080 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.8e-14 84.3 131 41.2
Nitab4.5_0014727g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 4.0e-14 83.2 70 68.6
arahy.Tifrunner.gnm1.ann1.NV9TN2 Arachis hypogaea HOM05D000034 ORTHO05D000037 5.2e-14 82.8 292 27.1
Peaxi162Scf00201g01410 Petunia axillaris HOM05D007579 ORTHO05D000037 1.2e-13 81.6 286 30.8
Nitab4.5_0003997g0040 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.0e-13 80.9 159 37.7
Nitab4.5_0000359g0120 Nicotiana tabacum HOM05D007579 ORTHO05D000285 7.5e-13 79.0 157 35.7
Nitab4.5_0000801g0060 Nicotiana tabacum HOM05D007579 ORTHO05D000285 9.8e-13 78.6 107 44.9
Nitab4.5_0003606g0030 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.3e-12 78.2 165 37.6
Nitab4.5_0004614g0020 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.3e-12 78.2 171 35.1
Nitab4.5_0012930g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.9e-12 77.0 45 86.7
Solyc04g054153.1 Solanum lycopersicum HOM05D000034 ORTHO05D000037 2.9e-12 77.0 73 57.5
arahy.Tifrunner.gnm1.ann1.AG0B9Q Arachis hypogaea HOM05D000034 ORTHO05D000285 3.7e-12 76.6 292 25.7
Solyc12g150115.1 Solanum lycopersicum HOM05D000034 ORTHO05D000037 3.7e-12 76.6 74 56.8
arahy.Tifrunner.gnm1.ann1.GG5U8X Arachis hypogaea HOM05D000876 ORTHO05D000285 4.9e-12 76.3 288 24.3
Nitab4.5_0003679g0100 Nicotiana tabacum HOM05D007579 ORTHO05D000285 4.9e-12 76.3 124 36.3
Nitab4.5_0013645g0010 Nicotiana tabacum HOM05D007579 ORTHO05D014074 4.9e-12 76.3 45 77.8
arahy.Tifrunner.gnm1.ann1.PEG6DJ Arachis hypogaea HOM05D000034 ORTHO05D000037 2.0e-10 70.9 283 24.7
arahy.Tifrunner.gnm1.ann1.X5RLQI Arachis hypogaea HOM05D000034 ORTHO05D000285 4.6e-10 69.7 289 25.3
arahy.Tifrunner.gnm1.ann1.Z2QP4M Arachis hypogaea HOM05D000034 ORTHO05D000037 4.6e-10 69.7 293 23.5
arahy.Tifrunner.gnm1.ann1.2911W9 Arachis hypogaea HOM05D000876 ORTHO05D000285 5.9e-10 69.3 288 23.6
arahy.Tifrunner.gnm1.ann1.L4SQ9F Arachis hypogaea HOM05D000034 ORTHO05D000037 3.9e-09 66.6 288 23.6
Atru.chr2.2393 Acer truncatum HOM05D000034 ORTHO05D000037 1.1e-08 65.1 293 24.2
HanXRQChr14g0461341 Helianthus annuus HOM05D000876 ORTHO05D000285 1.9e-08 64.3 215 28.8
Lsat_1_v5_gn_9_80960 Lactuca sativa HOM05D009382 ORTHO05D000285 2.5e-08 63.9 293 27.0
Peaxi162Scf00603g00414 Petunia axillaris HOM05D007579 ORTHO05D000285 2.5e-08 63.9 175 30.9
Peaxi162Scf00558g00416 Petunia axillaris HOM05D007579 ORTHO05D000285 3.3e-08 63.5 182 27.5
CAN.G2500.1 Capsicum annuum HOM05D007579 ORTHO05D000285 1.2e-07 61.6 69 42.0
Nitab4.5_0000259g0140 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.6e-07 61.2 135 36.3
Nitab4.5_0001811g0060 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.6e-07 61.2 79 54.4
Nitab4.5_0004630g0040 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.6e-07 61.2 111 39.6
Nitab4.5_0007412g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.6e-07 61.2 70 42.9
Nitab4.5_0000720g0130 Nicotiana tabacum HOM05D007579 ORTHO05D000285 6.2e-07 59.3 104 37.5
CANSAT64G0872 Cannabis sativa HOM05D000876 ORTHO05D000285 8.0e-07 58.9 182 25.8
Nitab4.5_0003708g0030 Nicotiana tabacum HOM05D007579 ORTHO05D000285 8.0e-07 58.9 28 85.7
DCAR_005487 Daucus carota HOM05D000034 ORTHO05D000037 1.1e-06 58.5 86 36.0
Nitab4.5_0004630g0060 Nicotiana tabacum HOM05D007579 ORTHO05D000037 1.1e-06 58.5 109 38.5
Peaxi162Scf00435g00116 Petunia axillaris HOM05D007579 ORTHO05D000285 1.1e-06 58.5 75 44.0
TWI56G0298 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 1.1e-06 58.5 221 24.0
PSO507G0009 Papaver somniferum HOM05D000876 ORTHO05D000285 1.8e-06 57.8 200 25.0
DCAR_025172 Daucus carota HOM05D000876 ORTHO05D000285 2.3e-06 57.4 193 28.0
HanXRQChr05g0143471 Helianthus annuus HOM05D000876 ORTHO05D000285 2.3e-06 57.4 216 27.8
Nitab4.5_0000025g0280 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.3e-06 57.4 80 41.2
Nitab4.5_0000666g0020 Nicotiana tabacum HOM05D007579 ORTHO05D000285 3.1e-06 57.0 57 47.4
Peaxi162Scf00973g00318 Petunia axillaris HOM05D000034 ORTHO05D000037 3.1e-06 57.0 51 56.9
Nitab4.5_0000059g0640 Nicotiana tabacum HOM05D007579 ORTHO05D000285 4.0e-06 56.6 66 56.1
Nitab4.5_0000506g0260 Nicotiana tabacum HOM05D000876 ORTHO05D000285 4.0e-06 56.6 28 82.1
Peaxi162Scf00024g00024 Petunia axillaris HOM05D007579 ORTHO05D000285 6.8e-06 55.8 139 32.4
Nitab4.5_0004989g0020 Nicotiana tabacum HOM05D007579 ORTHO05D000285 8.9e-06 55.5 109 36.7


User provided reference genes

Program Settings