Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003228g0070 Nicotiana tabacum HOM05D006600 ORTHO05D008446 3.3e-186 654.8 316 100.0
Nitab4.5_0000934g0020 Nicotiana tabacum HOM05D006600 ORTHO05D008446 1.1e-181 639.8 316 97.2
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 7.9e-164 580.5 328 85.4
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 9.7e-162 573.5 328 84.8
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 2.0e-154 549.3 288 91.0
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 1.3e-153 546.6 327 78.3
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 1.8e-152 542.7 325 79.7
Oeu050861.1 Olea europaea HOM05D006600 ORTHO05D008446 3.5e-151 538.5 324 78.1
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 7.7e-151 537.3 320 78.8
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 6.5e-150 534.3 325 77.2
Sabra14G0012400 Salix brachista HOM05D006600 ORTHO05D008446 6.5e-150 534.3 326 76.4
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 1.4e-149 533.1 325 77.8
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 5.5e-149 531.2 328 76.2
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 9.4e-149 530.4 325 77.2
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 4.7e-148 528.1 323 76.5
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 8.0e-148 527.3 323 76.8
Peaxi162Scf00081g00125 Petunia axillaris HOM05D006600 ORTHO05D008446 1.0e-147 526.9 328 79.6
PGSC0003DMG400021533 Solanum tuberosum HOM05D006600 ORTHO05D008446 1.0e-147 526.9 328 79.3
AUR62037454 Chenopodium quinoa HOM05D006600 ORTHO05D008446 1.4e-147 526.6 310 79.4
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 1.4e-147 526.6 325 76.0
Glyma.04G044500 Glycine max HOM05D006600 ORTHO05D008446 1.1e-146 523.5 325 75.4
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 7.4e-146 520.8 328 75.3
PSO541G2868 Papaver somniferum HOM05D006600 ORTHO05D008446 1.2e-143 513.5 328 73.8
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 2.0e-143 512.7 324 74.7
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 2.6e-143 512.3 326 74.2
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 3.5e-143 511.9 322 75.2
unitig_62.g23648 Utricularia gibba HOM05D006600 ORTHO05D008446 5.0e-142 508.1 324 72.5
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 3.2e-141 505.4 328 71.3
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 1.4e-139 500.0 288 80.2
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 1.6e-135 486.5 323 70.3
MSTRG.1040 Avicennia marina HOM05D006600 ORTHO05D008446 7.7e-135 484.2 325 70.5
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 7.7e-135 484.2 323 70.0
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 1.0e-134 483.8 323 70.0
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 1.0e-134 483.8 323 70.3
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 2.9e-134 482.3 323 69.3
Os03g0761200 Oryza sativa ssp. japonica HOM05D006600 ORTHO05D008446 3.8e-134 481.9 322 69.9
Zm00001eb214310 Zea mays HOM05D006600 ORTHO05D008446 3.8e-134 481.9 324 69.1
Ca_15912_v3 Cicer arietinum L. HOM05D006600 ORTHO05D008446 1.1e-133 480.3 325 70.8
Rhsim07G0222000 Rhododendron simsii HOM05D006600 ORTHO05D008446 5.5e-133 478.0 328 70.7
Dinv44978 Davidia involucrata HOM05D006600 ORTHO05D008446 8.0e-132 474.2 328 69.5
SalBow7G4697 Salvia bowleyana HOM05D006600 ORTHO05D008446 5.2e-131 471.5 325 68.9
CSS0036700 Camellia sinensis var. sinensis HOM05D006600 ORTHO05D008446 1.2e-130 470.3 328 68.6
Prupe.1G425800 Prunus persica HOM05D006600 ORTHO05D008446 1.5e-130 469.9 328 68.6
Actinidia38095 Actinidia chinensis HOM05D006600 ORTHO05D008446 3.4e-130 468.8 327 69.1
Gorai.009G217900 Gossypium raimondii HOM05D006600 ORTHO05D008446 5.7e-130 468.0 324 69.8
Lalb_Chr23g0267431 Lupinus albus HOM05D006600 ORTHO05D008446 9.8e-130 467.2 328 68.6
Cfa013668 Carpinus fangiana HOM05D006600 ORTHO05D008446 1.7e-129 466.5 328 68.6
Gohir.A05G207900 Gossypium hirsutum HOM05D006600 ORTHO05D008446 2.8e-129 465.7 324 69.1
vmacro04585 Vaccinium macrocarpon HOM05D006600 ORTHO05D008446 2.8e-129 465.7 328 69.5
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 3.7e-129 465.3 323 68.4
Lj1g0008642 Lotus japonicus HOM05D006600 ORTHO05D008446 3.7e-129 465.3 323 68.7
arahy.Tifrunner.gnm1.ann1.UTGV4K Arachis hypogaea HOM05D006600 ORTHO05D008446 4.8e-129 464.9 328 68.3
Lsat_1_v5_gn_6_112481 Lactuca sativa HOM05D006600 ORTHO05D008446 8.3e-129 464.2 330 68.8
PGR083G0558 Punica granatum HOM05D006600 ORTHO05D008446 1.1e-128 463.8 328 68.0
Phvul.009G070400 Phaseolus vulgaris HOM05D006600 ORTHO05D008446 1.4e-128 463.4 325 68.3
TWI56G0382 Tripterygium wilfordii HOM05D006600 ORTHO05D008446 1.8e-128 463.0 324 68.2
TAR625G0631 Trochodendron aralioides HOM05D006600 ORTHO05D008446 1.8e-128 463.0 328 67.1
Migut.C00501 Erythranthe guttata HOM05D006600 ORTHO05D008446 2.4e-128 462.6 325 68.0
Gohir.D05G211400 Gossypium hirsutum HOM05D006600 ORTHO05D008446 3.1e-128 462.2 324 68.8
VMungo1309G2568 Vigna mungo HOM05D006600 ORTHO05D008446 4.1e-128 461.8 325 68.3
Atru.chr13.803 Acer truncatum HOM05D006600 ORTHO05D008446 5.4e-128 461.5 324 67.9
HPP92_018760 Vanilla planifolia HOM05D006600 ORTHO05D008446 5.4e-128 461.5 322 67.1
Ciclev10001599m.g Citrus clementina HOM05D006600 ORTHO05D008446 7.0e-128 461.1 324 68.2
DCAR_020080 Daucus carota HOM05D006600 ORTHO05D008446 7.0e-128 461.1 328 67.1
arahy.Tifrunner.gnm1.ann1.H62KW4 Arachis hypogaea HOM05D006600 ORTHO05D008446 1.2e-127 460.3 328 68.0
Cc10_g05550 Coffea canephora HOM05D006600 ORTHO05D008446 2.7e-127 459.1 328 67.4
Glyma.06G045000 Glycine max HOM05D006600 ORTHO05D008446 2.9e-126 455.7 325 67.1
Aqoxy6G02751 Aquilegia oxysepala HOM05D006600 ORTHO05D008446 8.6e-126 454.1 325 67.7
MD08G1088100 Malus domestica HOM05D006600 ORTHO05D008446 8.6e-126 454.1 328 66.8
COL.COLO4_28538 Corchorus olitorius HOM05D006600 ORTHO05D008446 2.5e-125 452.6 335 66.6
Eucgr.F00122 Eucalyptus grandis HOM05D006600 ORTHO05D008446 2.5e-125 452.6 328 67.7
Haze_22302 Corylus avellana HOM05D006600 ORTHO05D008446 9.5e-125 450.7 320 68.1
FAN20G2273 Fragaria x ananassa HOM05D006600 ORTHO05D008446 9.5e-125 450.7 322 66.8
CANSAT35G1599 Cannabis sativa HOM05D006600 ORTHO05D008446 1.6e-124 449.9 328 67.1
Hma1.2p1_0923F.1_g236990 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 2.8e-124 449.1 328 67.4
AT5G65860 Arabidopsis thaliana HOM05D006600 ORTHO05D008446 4.7e-124 448.4 323 65.6
ClCG08G016350 Citrullus lanatus HOM05D006600 ORTHO05D008446 1.4e-123 446.8 328 65.9
CsaV3_2G026260 Cucumis sativus L. HOM05D006600 ORTHO05D008446 1.4e-123 446.8 328 66.2
EL10As7g23812 Beta vulgaris HOM05D006600 ORTHO05D008446 2.3e-123 446.0 366 61.7
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 4.0e-123 445.3 283 72.8
Sed0004073 Sechium edule HOM05D006600 ORTHO05D008446 1.3e-121 440.3 324 66.0
RcHm_v2.0_Chr6g0309231 Rosa chinensis HOM05D006600 ORTHO05D008446 4.9e-121 438.3 322 66.1
GSVIVG01009372001 Vitis vinifera HOM05D006600 ORTHO05D008446 3.2e-120 435.6 245 81.2
FvH4_2g33350 Fragaria vesca HOM05D006600 ORTHO05D008446 4.1e-120 435.3 322 64.6
FAN15G1504 Fragaria x ananassa HOM05D006600 ORTHO05D008446 4.1e-120 435.3 322 64.9
MELO3C010818.2 Cucumis melo HOM05D006600 ORTHO05D008446 5.4e-120 434.9 328 64.6
FAN24G1058 Fragaria x ananassa HOM05D006600 ORTHO05D008446 7.0e-120 434.5 322 64.6
Carub.0008s2674 Capsella rubella HOM05D006600 ORTHO05D008446 2.0e-119 433.0 322 64.0
SMO228G0045 Selaginella moellendorffii HOM05D006600 ORTHO05D008446 1.6e-116 423.3 325 61.8
Cpa.g.sc21.115 Carica papaya HOM05D006600 ORTHO05D008446 4.7e-116 421.8 236 80.5
CARHR279850 Cardamine hirsuta HOM05D006600 ORTHO05D008446 8.0e-116 421.0 329 61.1
ATR0030G048 Amborella trichopoda HOM05D006600 ORTHO05D008446 1.0e-115 420.6 329 63.2
FAN27G3009 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.0e-115 420.6 322 62.7
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 1.4e-115 420.2 258 76.7
Sp2g28940 Schrenkiella parvula HOM05D006600 ORTHO05D008446 7.5e-114 414.5 323 61.6
SEGI_28402 Sequoiadendron giganteum HOM05D006600 ORTHO05D008446 3.3e-109 399.1 320 60.3
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 3.6e-108 395.6 311 62.7
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 7.5e-106 387.9 247 75.3
Nn1g04625 Nelumbo nucifera HOM05D006600 ORTHO05D008446 2.8e-100 369.4 328 56.7
AagrBONN_evm.TU.Sc2ySwM_228.1907 Anthoceros agrestis HOM05D006600 ORTHO05D008446 6.6e-94 348.2 326 52.8
Mapoly0063s0069 Marchantia polymorpha HOM05D006600 ORTHO05D008446 1.9e-93 346.7 326 52.5
Potri.014G019000 Populus trichocarpa HOM05D006600 ORTHO05D008446 2.5e-93 346.3 263 65.4
ECA246G2737 Erigeron canadensis HOM05D006600 ORTHO05D008446 6.2e-92 341.7 259 64.9
Hma1.2p1_0923F.1_g236980 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 2.4e-91 339.7 279 62.4
Cre01.g050050 Chlamydomonas reinhardtii HOM05D006600 ORTHO05D008446 7.8e-87 324.7 384 44.0
Sc26g0004110 Simmondsia chinensis HOM05D006600 ORTHO05D008446 9.0e-83 311.2 251 62.2
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 7.6e-82 308.1 228 65.8
AL8G43570 Arabidopsis lyrata HOM05D006600 ORTHO05D008446 9.0e-75 284.6 251 56.6
MCO09G534 Micromonas commoda HOM05D006600 ORTHO05D008446 6.5e-65 251.9 328 38.7
Pp3c17_19880 Physcomitrium patens HOM05D006600 ORTHO05D008446 8.4e-65 251.5 243 49.8
MD15G1072900 Malus domestica HOM05D006600 ORTHO05D008446 1.3e-60 237.7 191 61.3
TAR624G0301 Trochodendron aralioides HOM05D006600 ORTHO05D008446 5.3e-59 232.3 138 76.1
CBR_g40512 Chara braunii HOM05D000409 ORTHO05D000184 1.0e-57 228.0 189 55.6
TAR374G0485 Trochodendron aralioides HOM05D000474 ORTHO05D003648 1.4e-51 207.6 126 73.8
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 6.9e-51 205.3 124 71.8
Actinidia08258 Actinidia chinensis HOM05D006600 ORTHO05D008446 5.3e-43 179.1 94 84.0
CBR_g40511 Chara braunii HOM05D000019 ORTHO05D000002 1.9e-24 117.5 150 46.7
Oeu040380.1 Olea europaea HOM05D006600 ORTHO05D008446 4.8e-20 102.8 87 65.5
GSVIVG01038121001 Vitis vinifera HOM05D006600 ORTHO05D008446 2.0e-18 97.4 76 59.2
MBI16_g35586_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D001493 3.8e-17 93.2 85 50.6
Actinidia08259 Actinidia chinensis HOM05D006600 ORTHO05D008446 1.3e-12 78.2 53 66.0
Dinv39240 Davidia involucrata HOM05D006600 ORTHO05D008446 1.9e-08 64.3 97 40.2
MELO3C023799.2 Cucumis melo HOM05D006600 ORTHO05D168989 5.2e-06 56.2 40 70.0
Cre05.g245500 Chlamydomonas reinhardtii HOM05D013933 ORTHO05D015601 8.9e-06 55.5 59 45.8


User provided reference genes

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