Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003228g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 3.1e-72 275.0 139 100.0
Nitab4.5_0000934g0080 Nicotiana tabacum HOM05D006069 ORTHO05D008101 1.0e-46 190.3 106 93.4
Solyc04g078060.1 Solanum lycopersicum HOM05D006069 ORTHO05D008101 2.0e-34 149.4 106 78.3
PGSC0003DMG400021511 Solanum tuberosum HOM05D006069 ORTHO05D008101 2.0e-34 149.4 106 78.3
Sopen04g031650 Solanum pennellii HOM05D006069 ORTHO05D008101 1.7e-33 146.4 106 77.4
Peaxi162Scf00081g00135 Petunia axillaris HOM05D002628 ORTHO05D008101 4.6e-31 138.3 106 71.7
Oeu014170.1 Olea europaea HOM05D006069 ORTHO05D008101 2.3e-27 125.9 105 63.8
Oeu061972.1 Olea europaea HOM05D006069 ORTHO05D008101 2.6e-26 122.5 105 61.9
Cfa013967 Carpinus fangiana HOM05D006069 ORTHO05D008101 7.6e-26 120.9 105 61.0
Gohir.A05G256400 Gossypium hirsutum HOM05D006069 ORTHO05D008101 7.6e-26 120.9 107 58.9
TWI56G0900 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 7.6e-26 120.9 107 57.0
Haze_22650 Corylus avellana HOM05D003905 ORTHO05D005329 9.9e-26 120.6 105 61.0
Gohir.D05G258200 Gossypium hirsutum HOM05D006069 ORTHO05D008101 9.9e-26 120.6 105 60.0
Gorai.009G269500 Gossypium raimondii HOM05D006069 ORTHO05D008101 9.9e-26 120.6 105 60.0
Haze_22649 Corylus avellana HOM05D006069 ORTHO05D008101 1.7e-25 119.8 105 60.0
Nitab4.5_0000569g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 2.2e-25 119.4 105 62.9
Ciclev10002907m.g Citrus clementina HOM05D006069 ORTHO05D008101 4.9e-25 118.2 105 55.2
Thecc.08G047500 Theobroma cacao HOM05D006069 ORTHO05D008101 6.4e-25 117.9 105 58.1
COL.COLO4_26120 Corchorus olitorius HOM05D006069 ORTHO05D008101 1.1e-24 117.1 105 58.1
Sabra02G0016400 Salix brachista HOM05D006069 ORTHO05D008101 1.1e-24 117.1 106 58.5
CiPaw.07G148400 Carya illinoinensis HOM05D006069 ORTHO05D008101 2.4e-24 115.9 105 58.1
Cfa013969 Carpinus fangiana HOM05D006069 ORTHO05D008101 3.2e-24 115.5 105 59.0
Manes.05G145900 Manihot esculenta HOM05D006069 ORTHO05D008101 3.2e-24 115.5 124 51.6
Nitab4.5_0007809g0010 Nicotiana tabacum HOM05D006069 ORTHO05D008101 3.2e-24 115.5 105 61.9
Atru.chr13.270 Acer truncatum HOM05D006069 ORTHO05D008101 4.1e-24 115.2 105 53.3
Duzib041G0459 Durio zibethinus HOM05D006069 ORTHO05D008101 4.1e-24 115.2 105 56.2
Dinv31861 Davidia involucrata HOM05D006069 ORTHO05D000038 7.1e-24 114.4 105 60.0
Potri.002G020200 Populus trichocarpa HOM05D006069 ORTHO05D008101 9.2e-24 114.0 105 57.1
TAR625G1525 Trochodendron aralioides HOM05D006069 ORTHO05D008101 1.2e-23 113.6 105 59.0
Duzib093G2212 Durio zibethinus HOM05D006069 ORTHO05D008101 1.6e-23 113.2 105 59.0
Sopen12g030410 Solanum pennellii HOM05D006069 ORTHO05D008101 2.1e-23 112.8 105 56.2
Hma1.2p1_0733F.1_g210300 Hydrangea macrophylla HOM05D006069 ORTHO05D008101 2.7e-23 112.5 105 60.0
Prupe.1G363800 Prunus persica HOM05D006069 ORTHO05D008101 3.5e-23 112.1 115 51.3
RcHm_v2.0_Chr6g0303091 Rosa chinensis HOM05D006069 ORTHO05D008101 3.5e-23 112.1 108 55.6
TWI12G0868 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 3.5e-23 112.1 106 54.7
Cpa.g.c46170 Carica papaya HOM05D006069 ORTHO05D008101 4.6e-23 111.7 105 54.3
Cpa.g.sc64.165 Carica papaya HOM05D006069 ORTHO05D008101 4.6e-23 111.7 105 54.3
Duzib116G0547 Durio zibethinus HOM05D006069 ORTHO05D008101 4.6e-23 111.7 106 56.6
FvH4_2g38290 Fragaria vesca HOM05D006069 ORTHO05D008101 4.6e-23 111.7 106 55.7
Potri.005G241200 Populus trichocarpa HOM05D006069 ORTHO05D008101 4.6e-23 111.7 106 54.7
VMungo0647G0980 Vigna mungo HOM05D006069 ORTHO05D008101 6.0e-23 111.3 105 56.2
Actinidia16995 Actinidia chinensis HOM05D006069 ORTHO05D006669 7.8e-23 110.9 105 59.0
Actinidia15431 Actinidia chinensis HOM05D006069 ORTHO05D008101 1.0e-22 110.5 105 57.1
Eucgr.H00971 Eucalyptus grandis HOM05D006069 ORTHO05D008101 1.0e-22 110.5 105 53.3
FAN27G3260 Fragaria x ananassa HOM05D006069 ORTHO05D008101 1.0e-22 110.5 106 54.7
QL02p011928 Quercus lobata HOM05D006069 ORTHO05D008101 1.0e-22 110.5 105 55.2
QL11p034297 Quercus lobata HOM05D006069 ORTHO05D008101 1.0e-22 110.5 105 55.2
DCAR_013877 Daucus carota HOM05D006069 ORTHO05D000038 1.3e-22 110.2 105 57.1
PGSC0003DMG400011549 Solanum tuberosum HOM05D006069 ORTHO05D008101 1.3e-22 110.2 109 55.0
Oeu054481.1 Olea europaea HOM05D006069 ORTHO05D008101 1.7e-22 109.8 106 58.5
CSS0019530 Camellia sinensis var. sinensis HOM05D006069 ORTHO05D008101 2.3e-22 109.4 105 55.2
Migut.C00852 Erythranthe guttata HOM05D006069 ORTHO05D008101 3.9e-22 108.6 105 57.1
FAN15G3329 Fragaria x ananassa HOM05D006069 ORTHO05D008101 3.9e-22 108.6 106 53.8
Phvul.001G005300 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 3.9e-22 108.6 105 55.2
Glyma.14G219800 Glycine max HOM05D006069 ORTHO05D008101 6.6e-22 107.8 105 53.3
SalBow7G4587 Salvia bowleyana HOM05D006069 ORTHO05D008101 6.6e-22 107.8 105 56.2
unitig_82.g27107 Utricularia gibba HOM05D006069 ORTHO05D008101 8.6e-22 107.5 105 55.2
DCAR_016725 Daucus carota HOM05D006069 ORTHO05D008101 1.1e-21 107.1 105 54.3
Migut.N03168 Erythranthe guttata HOM05D006069 ORTHO05D008101 1.5e-21 106.7 105 56.2
Sabra05G0186700 Salix brachista HOM05D006069 ORTHO05D008101 1.5e-21 106.7 106 53.8
Sc02g0008640 Simmondsia chinensis HOM05D006069 ORTHO05D008101 1.9e-21 106.3 105 54.3
Lalb_Chr19g0131451 Lupinus albus HOM05D006069 ORTHO05D008101 2.5e-21 105.9 107 55.1
Nn6g32021 Nelumbo nucifera HOM05D006069 ORTHO05D008101 2.5e-21 105.9 107 56.1
SGA_v2.0_scaffold11G05937 Striga asiatica HOM05D006069 ORTHO05D008101 2.5e-21 105.9 105 56.2
arahy.Tifrunner.gnm1.ann1.LEZM1J Arachis hypogaea HOM05D006069 ORTHO05D008101 4.3e-21 105.1 106 55.7
PGR031G1000 Punica granatum HOM05D006069 ORTHO05D008101 4.3e-21 105.1 105 50.5
MD08G1011100 Malus domestica HOM05D006069 ORTHO05D008101 5.6e-21 104.8 106 52.8
AT1G75810 Arabidopsis thaliana HOM05D006069 ORTHO05D008101 9.6e-21 104.0 107 50.5
CANSAT25G1864 Cannabis sativa HOM05D006069 ORTHO05D008101 9.6e-21 104.0 106 54.7
Ca_00837_v3 Cicer arietinum L. HOM05D006069 ORTHO05D008101 9.6e-21 104.0 105 52.4
Manes.18G012400 Manihot esculenta HOM05D006069 ORTHO05D008101 9.6e-21 104.0 105 52.4
unitig_747.g21531 Utricularia gibba HOM05D006069 ORTHO05D008101 9.6e-21 104.0 106 53.8
AL2G35800 Arabidopsis lyrata HOM05D006069 ORTHO05D008101 1.2e-20 103.6 107 50.5
SalBow8G0098 Salvia bowleyana HOM05D006069 ORTHO05D008101 1.2e-20 103.6 105 55.2
Gohir.A06G002300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 2.1e-20 102.8 103 55.3
Sc15g0004900 Simmondsia chinensis HOM05D006069 ORTHO05D008101 2.8e-20 102.4 105 51.4
Gohir.D06G005300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 3.6e-20 102.1 103 55.3
Gorai.010G002500 Gossypium raimondii HOM05D006069 ORTHO05D008101 3.6e-20 102.1 103 55.3
Lsat_1_v5_gn_0_33081 Lactuca sativa HOM05D006069 ORTHO05D008101 4.7e-20 101.7 103 54.4
Lalb_Chr01g0008621 Lupinus albus HOM05D006069 ORTHO05D008101 6.2e-20 101.3 105 54.3
Lalb_Chr03g0033431 Lupinus albus HOM05D006069 ORTHO05D008101 1.4e-19 100.1 107 52.3
Medtr3g113620 Medicago truncatula HOM05D006069 ORTHO05D008101 1.4e-19 100.1 105 51.4
Glyma.17G258800 Glycine max HOM05D006069 ORTHO05D008101 1.8e-19 99.8 105 49.5
Aa31LG4G6010 Aethionema arabicum HOM05D006069 ORTHO05D008101 2.4e-19 99.4 110 48.2
Sp5g30930 Schrenkiella parvula HOM05D006069 ORTHO05D008101 5.2e-19 98.2 111 45.9
HanXRQChr13g0387231 Helianthus annuus HOM05D006069 ORTHO05D008101 8.9e-19 97.4 106 53.8
Thhalv10019558m.g Eutrema salsugineum HOM05D006069 ORTHO05D008101 1.5e-18 96.7 110 48.2
EL10Ac1g02174 Beta vulgaris HOM05D006069 ORTHO05D008101 2.0e-18 96.3 105 51.4
Carub.0002s2266 Capsella rubella HOM05D006069 ORTHO05D008101 2.0e-18 96.3 105 45.7
Lsat_1_v5_gn_8_29900 Lactuca sativa HOM05D006069 ORTHO05D008101 2.0e-18 96.3 107 52.3
MD15G1011100 Malus domestica HOM05D006069 ORTHO05D008101 3.4e-18 95.5 106 50.9
AUR62041483 Chenopodium quinoa HOM05D006069 ORTHO05D008101 7.6e-18 94.4 107 50.5
SGA_v2.0_scaffold47G17498 Striga asiatica HOM05D006069 ORTHO05D008101 7.6e-18 94.4 101 53.5
BcaC03g15627 Brassica carinata HOM05D006069 ORTHO05D008101 1.3e-17 93.6 108 45.4
BcaC08g47069 Brassica carinata HOM05D006069 ORTHO05D008101 1.7e-17 93.2 104 44.2
C02p33660 Brassica napus HOM05D006069 ORTHO05D008101 2.2e-17 92.8 108 45.4
BolC2t09338H Brassica oleracea HOM05D006069 ORTHO05D008101 2.2e-17 92.8 108 45.4
BraA02t07058Z Brassica rapa HOM05D006069 ORTHO05D008101 2.2e-17 92.8 108 45.4
Ah.00g000260 Amaranthus hybridus HOM05D006069 ORTHO05D008101 4.9e-17 91.7 107 47.7
BcaB05g24944 Brassica carinata HOM05D006069 ORTHO05D008101 8.4e-17 90.9 112 43.8
A02p20240 Brassica napus HOM05D006069 ORTHO05D008101 8.4e-17 90.9 106 46.2
Psat0s2878g0120 Pisum sativum HOM05D006069 ORTHO05D008101 1.1e-16 90.5 106 48.1
Lalb_Chr23g0266111 Lupinus albus HOM05D006069 ORTHO05D008101 1.4e-16 90.1 101 47.5
Phvul.009G017800 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 4.2e-16 88.6 112 45.5
THA.LOC104805018 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 5.4e-16 88.2 105 44.8
Aqoxy5G01811 Aquilegia oxysepala HOM05D006069 ORTHO05D008101 9.3e-16 87.4 111 49.5
Dinv26438 Davidia involucrata HOM05D006069 ORTHO05D008101 9.3e-16 87.4 93 52.7
THA.LOC104811416 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 1.2e-15 87.0 105 43.8
Lalb_Chr11g0061821 Lupinus albus HOM05D006069 ORTHO05D008101 2.7e-15 85.9 105 45.7
arahy.Tifrunner.gnm1.ann1.Q2AYB8 Arachis hypogaea HOM05D006069 ORTHO05D008101 4.6e-15 85.1 104 46.2
CARHR069230 Cardamine hirsuta HOM05D006069 ORTHO05D008101 6.0e-15 84.7 105 42.9
C06p49760 Brassica napus HOM05D006069 ORTHO05D008101 1.0e-14 84.0 107 42.1
VMungo1309G1320 Vigna mungo HOM05D006069 ORTHO05D008101 1.0e-14 84.0 101 45.5
arahy.Tifrunner.gnm1.ann1.KJD857 Arachis hypogaea HOM05D006069 ORTHO05D008101 2.3e-14 82.8 104 46.2
Peaxi162Scf00160g00114 Petunia axillaris HOM05D006069 ORTHO05D008101 2.3e-14 82.8 105 49.5
BcaC08g47066 Brassica carinata HOM05D006069 ORTHO05D008101 6.6e-14 81.3 106 41.5
BcaC08g47325 Brassica carinata HOM05D006069 ORTHO05D008101 6.6e-14 81.3 106 41.5
BolC6t40015H Brassica oleracea HOM05D006069 ORTHO05D008101 6.6e-14 81.3 106 41.5
Glyma.06G023700 Glycine max HOM05D006069 ORTHO05D008101 6.6e-14 81.3 101 43.6
Rhsim06G0020100 Rhododendron simsii HOM05D006069 ORTHO05D008101 6.6e-14 81.3 93 48.4
PSO700G0183 Papaver somniferum HOM05D006069 ORTHO05D008101 8.7e-14 80.9 108 44.4
AUR62040543 Chenopodium quinoa HOM05D006069 ORTHO05D009490 1.1e-13 80.5 62 67.7
ECA233G2757 Erigeron canadensis HOM05D006069 ORTHO05D008101 2.5e-13 79.3 96 50.0
PSO170G3064 Papaver somniferum HOM05D006069 ORTHO05D008101 2.8e-12 75.9 106 43.4
Psat6g002280 Pisum sativum HOM05D006069 ORTHO05D008101 2.8e-12 75.9 101 43.6
Medtr1g025490 Medicago truncatula HOM05D006069 ORTHO05D008101 2.4e-11 72.8 101 40.6
A07p41340 Brassica napus HOM05D006069 ORTHO05D032697 3.8e-09 65.5 68 47.1
SalBow6G6594 Salvia bowleyana HOM05D006069 ORTHO05D008101 3.2e-08 62.4 56 58.9
SalBow6G5718 Salvia bowleyana HOM05D006069 ORTHO05D008101 4.2e-08 62.0 55 60.0


User provided reference genes

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