Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003223g0040 Nicotiana tabacum HOM05D006902 ORTHO05D008468 1.6e-41 172.9 106 100.0
Nitab4.5_0003223g0030 Nicotiana tabacum HOM05D006902 ORTHO05D008468 1.2e-28 130.2 70 94.3
PGSC0003DMG402010824 Solanum tuberosum HOM05D006902 ORTHO05D008468 3.1e-26 122.1 104 69.2
Sopen10g004990 Solanum pennellii HOM05D006902 ORTHO05D008468 2.3e-24 115.9 104 66.3
Peaxi162Scf00371g01024 Petunia axillaris HOM05D006902 ORTHO05D008468 8.6e-24 114.0 102 62.7
Nitab4.5_0005936g0020 Nicotiana tabacum HOM05D006902 ORTHO05D008468 1.0e-21 107.1 63 87.3
Dinv40499 Davidia involucrata HOM05D006902 ORTHO05D008468 5.9e-17 91.3 103 51.5
RcHm_v2.0_Chr5g0006551 Rosa chinensis HOM05D006902 ORTHO05D008468 4.0e-13 78.6 108 55.6
FvH4_1g04320 Fragaria vesca HOM05D006902 ORTHO05D008468 6.8e-13 77.8 112 53.6
Thecc.06G198400 Theobroma cacao HOM05D006902 ORTHO05D008468 2.0e-12 76.3 102 44.1
Gorai.009G173300 Gossypium raimondii HOM05D006902 ORTHO05D008468 4.4e-12 75.1 103 44.7
FAN28G0433 Fragaria x ananassa HOM05D006902 ORTHO05D008468 5.8e-12 74.7 108 57.4
Hma1.2p1_0144F.1_g064740 Hydrangea macrophylla HOM05D006902 ORTHO05D008468 7.5e-12 74.3 106 44.3
FAN25G0692 Fragaria x ananassa HOM05D006902 ORTHO05D008468 9.8e-12 73.9 108 55.6
FAN26G1405 Fragaria x ananassa HOM05D006902 ORTHO05D008468 1.3e-11 73.6 111 54.1
Cpa.g.sc27.115 Carica papaya HOM05D006902 ORTHO05D008468 1.7e-11 73.2 112 45.5
Migut.H01513 Erythranthe guttata HOM05D006902 ORTHO05D008468 1.7e-11 73.2 105 45.7
FAN19G2227 Fragaria x ananassa HOM05D006902 ORTHO05D008468 1.7e-11 73.2 107 56.1
Gohir.D05G168200 Gossypium hirsutum HOM05D006902 ORTHO05D008468 1.7e-11 73.2 103 43.7
FAN23G2525 Fragaria x ananassa HOM05D006902 ORTHO05D008468 2.2e-11 72.8 111 55.9
MSTRG.14679 Avicennia marina HOM05D006902 ORTHO05D008468 8.3e-11 70.9 103 41.7
Gohir.A05G165200 Gossypium hirsutum HOM05D006902 ORTHO05D008468 2.4e-10 69.3 103 42.7
Rhsim02G0120100 Rhododendron simsii HOM05D006902 ORTHO05D008468 4.1e-10 68.6 105 41.9
SalBow7G0974 Salvia bowleyana HOM05D006902 ORTHO05D008468 4.1e-10 68.6 100 46.0
AUR62014725 Chenopodium quinoa HOM05D006902 ORTHO05D008468 5.4e-10 68.2 94 43.6
FvH4_3g04070 Fragaria vesca HOM05D006902 ORTHO05D008468 7.0e-10 67.8 105 44.8
Prupe.4G036300 Prunus persica HOM05D006902 ORTHO05D008468 9.2e-10 67.4 105 52.4
Manes.16G021000 Manihot esculenta HOM05D006902 ORTHO05D008468 1.2e-09 67.0 105 41.0
CiPaw.09G158500 Carya illinoinensis HOM05D006902 ORTHO05D008468 2.0e-09 66.2 100 44.0
Actinidia24062 Actinidia chinensis HOM05D006902 ORTHO05D008468 2.7e-09 65.9 106 40.6
Oeu038228.1 Olea europaea HOM05D006902 ORTHO05D008468 2.7e-09 65.9 104 42.3
Potri.004G035200 Populus trichocarpa HOM05D006902 ORTHO05D008468 3.5e-09 65.5 106 45.3
QL03p053069 Quercus lobata HOM05D006902 ORTHO05D008468 6.0e-09 64.7 104 51.0
Duzib235G0611 Durio zibethinus HOM05D000306 ORTHO05D000410 7.8e-09 64.3 98 41.8
Potri.011G043400 Populus trichocarpa HOM05D006902 ORTHO05D008468 1.3e-08 63.5 103 43.7
HanXRQChr17g0551071 Helianthus annuus HOM05D006902 ORTHO05D008468 2.3e-08 62.8 105 51.4
Cc02_g12510 Coffea canephora HOM05D006902 ORTHO05D008468 3.0e-08 62.4 69 50.7
Sabra04G0021000 Salix brachista HOM05D006902 ORTHO05D008468 3.9e-08 62.0 108 42.6
AUR62016906 Chenopodium quinoa HOM05D006902 ORTHO05D008468 5.0e-08 61.6 107 38.3
Ciclev10016776m.g Citrus clementina HOM05D006902 ORTHO05D008468 8.6e-08 60.8 101 41.6
Sed0006938 Sechium edule HOM05D006902 ORTHO05D008468 1.5e-07 60.1 104 37.5
PSO063G2673 Papaver somniferum HOM05D006902 ORTHO05D008468 1.9e-07 59.7 104 38.5
Ah.09g236070 Amaranthus hybridus HOM05D006902 ORTHO05D008468 7.3e-07 57.8 68 45.6
TWI38G1087 Tripterygium wilfordii HOM05D006902 ORTHO05D008468 7.3e-07 57.8 100 39.0
Lsat_1_v5_gn_4_57121 Lactuca sativa HOM05D006902 ORTHO05D008468 9.5e-07 57.4 119 47.1
CANSAT56G2140 Cannabis sativa HOM05D006902 ORTHO05D008468 1.2e-06 57.0 106 45.3
MD10G1302800 Malus domestica HOM05D006902 ORTHO05D008468 1.2e-06 57.0 107 48.6
PSO782G4966 Papaver somniferum HOM05D006902 ORTHO05D008468 1.2e-06 57.0 104 37.5
Sc05g0008060 Simmondsia chinensis HOM05D006902 ORTHO05D008468 1.2e-06 57.0 108 38.0
Sc05g0010000 Simmondsia chinensis HOM05D006902 ORTHO05D008468 1.2e-06 57.0 108 38.0
CAN.G132.10 Capsicum annuum HOM05D006902 ORTHO05D008468 1.6e-06 56.6 69 52.2
CsaV3_4G028920 Cucumis sativus L. HOM05D006902 ORTHO05D008468 1.6e-06 56.6 105 38.1
Sabra11G0030000 Salix brachista HOM05D006902 ORTHO05D008468 1.6e-06 56.6 109 41.3
DCAR_008067 Daucus carota HOM05D006902 ORTHO05D008468 2.8e-06 55.8 110 43.6
ClCG04G003630 Citrullus lanatus HOM05D006902 ORTHO05D008468 6.2e-06 54.7 106 43.4


User provided reference genes

Program Settings