Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003222g0040 Nicotiana tabacum HOM05D007924 ORTHO05D010328 7.5e-52 206.8 99 100.0
CAN.G1180.17 Capsicum annuum HOM05D007924 ORTHO05D010328 1.3e-40 169.5 110 77.3
PGSC0003DMG400011350 Solanum tuberosum HOM05D007924 ORTHO05D010328 1.7e-40 169.1 110 76.4
Lj2P1227T93 Lonicera japonica HOM05D007924 ORTHO05D010328 4.4e-36 154.5 113 70.8
CAN.G1001.34 Capsicum annuum HOM05D007924 ORTHO05D010328 9.8e-36 153.3 109 70.6
Nitab4.5_0000844g0160 Nicotiana tabacum HOM05D007924 ORTHO05D010328 2.8e-35 151.8 110 69.1
Duzib116G0340 Durio zibethinus HOM05D007924 ORTHO05D010328 3.7e-35 151.4 108 71.3
HanXRQMTg0579161 Helianthus annuus HOM05D007924 ORTHO05D010328 1.8e-34 149.1 113 69.0
Nn1g10039 Nelumbo nucifera HOM05D007924 ORTHO05D010328 4.1e-34 147.9 113 69.0
Sed0020154 Sechium edule HOM05D007924 ORTHO05D010328 9.2e-34 146.7 113 68.1
GSVIVG01000955001 Vitis vinifera HOM05D007924 ORTHO05D010328 1.2e-33 146.4 113 68.1
CANSAT16G0013 Cannabis sativa HOM05D007924 ORTHO05D010328 3.5e-33 144.8 113 68.1
LjContig00315g0007302 Lotus japonicus HOM05D007924 ORTHO05D010328 4.5e-33 144.4 112 67.0
SGA_v2.0_scaffold575G53004 Striga asiatica HOM05D007924 ORTHO05D010328 4.5e-33 144.4 113 64.6
TPR.G7050 Trifolium pratense HOM05D007924 ORTHO05D010328 5.9e-33 144.1 112 67.0
Ca_03774_v3 Cicer arietinum L. HOM05D007924 ORTHO05D010328 7.8e-33 143.7 112 67.0
Nitab4.5_0003945g0040 Nicotiana tabacum HOM05D007924 ORTHO05D010328 1.0e-32 143.3 110 70.0
RhsimMtG0003200 Rhododendron simsii HOM05D007924 ORTHO05D010328 1.3e-32 142.9 111 67.6
CSS0018158 Camellia sinensis var. sinensis HOM05D007924 ORTHO05D010328 1.7e-32 142.5 113 67.3
DCAR_032428 Daucus carota HOM05D007924 ORTHO05D010328 2.9e-32 141.7 113 65.5
PGR028G0018 Punica granatum HOM05D007924 ORTHO05D010328 6.6e-32 140.6 111 67.6
Nitab4.5_0028251g0010 Nicotiana tabacum HOM05D007924 ORTHO05D010328 1.5e-31 139.4 110 67.3
Lalb_Chr00c24g0406701 Lupinus albus HOM05D007924 ORTHO05D010328 5.6e-31 137.5 112 65.2
RcHm_v2.0_Chr6g0257961 Rosa chinensis HOM05D007924 ORTHO05D010328 7.3e-31 137.1 113 64.6
RcHm_v2.0_MTg0498901 Rosa chinensis HOM05D007924 ORTHO05D010328 7.3e-31 137.1 113 64.6
Nn1g10153 Nelumbo nucifera HOM05D007924 ORTHO05D010328 2.8e-30 135.2 110 66.4
BraSC48t46292Z Brassica rapa HOM05D007924 ORTHO05D010328 1.4e-29 132.9 111 65.8
BraSC48t46309Z Brassica rapa HOM05D007924 ORTHO05D010328 1.4e-29 132.9 111 65.8
Lalb_Chr14g0363841 Lupinus albus HOM05D007924 ORTHO05D010328 1.4e-29 132.9 101 67.3
Thhalv10029138m.g Eutrema salsugineum HOM05D007924 ORTHO05D010328 1.8e-29 132.5 111 64.0
Lj3g0001131 Lotus japonicus HOM05D007924 ORTHO05D010328 3.0e-29 131.7 112 62.5
AT2G07707 Arabidopsis thaliana HOM05D007924 ORTHO05D010328 4.0e-29 131.3 111 64.9
ATMG00480 Arabidopsis thaliana HOM05D007924 ORTHO05D010328 4.0e-29 131.3 111 64.9
CARHR282860 Cardamine hirsuta HOM05D007924 ORTHO05D010328 4.0e-29 131.3 111 64.9
BolC1t03437H Brassica oleracea HOM05D007924 ORTHO05D010328 2.6e-28 128.6 111 64.0
Nitab4.5_0004553g0090 Nicotiana tabacum HOM05D007924 ORTHO05D010328 5.7e-28 127.5 71 85.9
SHI38116 Sapria himalayana HOM05D007924 ORTHO05D010328 1.4e-26 122.9 113 61.1
Cfa023001 Carpinus fangiana HOM05D007924 ORTHO05D010328 2.0e-25 119.0 97 64.9
SabraMtG0001000 Salix brachista HOM05D007924 ORTHO05D010328 2.7e-25 118.6 111 61.3
Nitab4.5_0000172g0710 Nicotiana tabacum HOM05D007924 ORTHO05D010328 3.0e-24 115.2 108 58.3
PGSC0003DMG400013141 Solanum tuberosum HOM05D007924 ORTHO05D010328 1.1e-21 106.7 56 89.3
Nitab4.5_0002734g0010 Nicotiana tabacum HOM05D007924 ORTHO05D010328 2.0e-20 102.4 56 85.7
arahy.Tifrunner.gnm1.ann1.I8TN6N Arachis hypogaea HOM05D007924 ORTHO05D010328 5.8e-20 100.9 67 76.1
Gorai.001G164500 Gossypium raimondii HOM05D007924 ORTHO05D010328 4.3e-15 84.7 76 57.9
HanXRQMTg0579521 Helianthus annuus HOM05D007924 ORTHO05D010328 2.8e-14 82.0 69 62.3
Nitab4.5_0000172g1200 Nicotiana tabacum HOM05D007924 ORTHO05D007069 4.0e-13 78.2 67 62.7
CsaV3_5G015830 Cucumis sativus L. HOM05D007924 ORTHO05D010328 4.4e-12 74.7 69 55.1
CsaV3_5G016970 Cucumis sativus L. HOM05D007924 ORTHO05D010328 1.1e-10 70.1 68 52.9
Oeu018666.1 Olea europaea HOM05D007924 ORTHO05D010328 3.5e-09 65.1 56 58.9


User provided reference genes

Program Settings