Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003217g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 7.3e-121 437.6 279 100.0
Nitab4.5_0003496g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.9e-40 169.1 92 87.0
Nitab4.5_0010381g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.1e-39 167.9 267 51.7
Nitab4.5_0002311g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 8.6e-37 158.3 287 44.9
Nitab4.5_0005665g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.5e-28 130.2 179 45.8
PGSC0003DMG400038860 Solanum tuberosum HOM05D004064 ORTHO05D011910 2.5e-28 130.2 89 67.4
Nitab4.5_0021453g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.8e-27 126.7 268 36.9
Nitab4.5_0004504g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 8.0e-27 125.2 91 61.5
Sopen08g005960 Solanum pennellii HOM05D004064 ORTHO05D011910 3.1e-26 123.2 84 67.9
Solyc04g039737.1 Solanum lycopersicum HOM05D004064 ORTHO05D009909 1.5e-25 120.9 84 65.5
Sopen10g005830 Solanum pennellii HOM05D000017 ORTHO05D011910 2.0e-25 120.6 84 65.5
Nitab4.5_0000161g0170 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.6e-25 120.2 205 39.0
Nitab4.5_0002581g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.4e-25 119.8 84 64.3
Sopen02g009320 Solanum pennellii HOM05D000017 ORTHO05D011910 5.8e-25 119.0 84 64.3
Sopen02g014660 Solanum pennellii HOM05D000017 ORTHO05D011910 5.8e-25 119.0 84 64.3
Sopen07g020390 Solanum pennellii HOM05D000017 ORTHO05D011910 5.8e-25 119.0 84 64.3
Sopen08g008550 Solanum pennellii HOM05D004064 ORTHO05D011910 5.8e-25 119.0 84 64.3
Nitab4.5_0029420g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 7.5e-25 118.6 84 63.1
Nitab4.5_0006429g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.3e-24 117.9 84 63.1
Nitab4.5_0001461g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.2e-24 117.1 79 67.1
Nitab4.5_0001499g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009561 2.2e-24 117.1 134 60.4
Nitab4.5_0000535g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 9.2e-23 111.7 84 63.1
Nitab4.5_0007351g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.0e-21 106.7 170 40.0
PGSC0003DMG400043109 Solanum tuberosum HOM05D004064 ORTHO05D009909 3.9e-21 106.3 92 53.3
Nitab4.5_0008516g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009909 6.6e-21 105.5 115 55.7
Sopen04g011640 Solanum pennellii HOM05D004064 ORTHO05D009909 2.5e-20 103.6 92 52.2
PGSC0003DMG400045086 Solanum tuberosum HOM05D004064 ORTHO05D009909 4.7e-19 99.4 82 56.1
Solyc08g041720.1 Solanum lycopersicum HOM05D004064 ORTHO05D009909 6.2e-19 99.0 92 50.0
PGSC0003DMG400001699 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.1e-18 98.2 92 50.0
PGSC0003DMG400012698 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.1e-18 98.2 92 51.1
Sopen01g016940 Solanum pennellii HOM05D004064 ORTHO05D009909 1.4e-18 97.8 84 54.8
Sopen08g011770 Solanum pennellii HOM05D004064 ORTHO05D009909 2.3e-18 97.1 74 58.1
Sopen04g024150 Solanum pennellii HOM05D004064 ORTHO05D009909 5.2e-18 95.9 82 53.7
CAN.G127.19 Capsicum annuum HOM05D004064 ORTHO05D009909 3.4e-17 93.2 84 52.4
Nitab4.5_0000062g0040 Nicotiana tabacum HOM05D004064 ORTHO05D284748 5.8e-17 92.4 118 55.1
CAN.G1289.3 Capsicum annuum HOM05D004064 ORTHO05D009909 2.2e-16 90.5 77 51.9
PGSC0003DMG400035350 Solanum tuberosum HOM05D004064 ORTHO05D011910 2.2e-16 90.5 69 62.3
Nitab4.5_0001907g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.3e-13 80.5 62 58.1
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 3.9e-13 79.7 62 58.1
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 3.9e-13 79.7 62 58.1
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 3.9e-13 79.7 62 58.1
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 3.9e-13 79.7 62 58.1
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 5.1e-13 79.3 62 58.1
Nitab4.5_0007771g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009909 8.6e-13 78.6 89 41.6
Sopen03g024100 Solanum pennellii HOM05D004064 ORTHO05D009909 1.5e-12 77.8 71 52.1
Sopen03g028020 Solanum pennellii HOM05D004064 ORTHO05D009909 7.3e-12 75.5 91 45.1
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 7.3e-12 75.5 62 56.5
Sopen12g026480 Solanum pennellii HOM05D000017 ORTHO05D009561 3.6e-11 73.2 63 57.1
PGSC0003DMG401018257 Solanum tuberosum HOM05D004064 ORTHO05D009909 6.2e-11 72.4 84 39.3
PGSC0003DMG400035494 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.1e-10 71.6 81 42.0
PGSC0003DMG400035967 Solanum tuberosum HOM05D010431 ORTHO05D016891 3.1e-10 70.1 79 41.8
CAN.G278.18 Capsicum annuum HOM05D004064 ORTHO05D009909 5.2e-10 69.3 69 46.4
PGSC0003DMG400038561 Solanum tuberosum HOM05D004064 ORTHO05D009909 5.2e-10 69.3 61 49.2
Nitab4.5_0003166g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009909 5.8e-09 65.9 175 32.6
PGSC0003DMG400047205 Solanum tuberosum HOM05D004064 ORTHO05D009909 5.8e-09 65.9 85 44.7
PGSC0003DMG400039421 Solanum tuberosum HOM05D005093 ORTHO05D009561 9.9e-09 65.1 65 47.7
Sopen05g014940 Solanum pennellii HOM05D004064 ORTHO05D009909 2.2e-08 63.9 48 60.4
Sopen01g007650 Solanum pennellii HOM05D010431 ORTHO05D009909 1.4e-07 61.2 77 40.3
PGSC0003DMG400017950 Solanum tuberosum HOM05D004064 ORTHO05D009561 1.4e-07 61.2 126 33.3
PGSC0003DMG400007543 Solanum tuberosum HOM05D004064 ORTHO05D009909 2.4e-07 60.5 73 43.8
Sopen11g026090 Solanum pennellii HOM05D000017 ORTHO05D000013 3.2e-07 60.1 42 59.5
Sopen10g015440 Solanum pennellii HOM05D010431 ORTHO05D010855 9.2e-07 58.5 79 35.4
Solyc10g054675.1 Solanum lycopersicum HOM05D004064 ORTHO05D011910 1.2e-06 58.2 38 60.5
Sopen08g005490 Solanum pennellii HOM05D000017 ORTHO05D000013 2.1e-06 57.4 50 50.0
Nitab4.5_0000831g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.6e-06 56.2 34 70.6


User provided reference genes

Program Settings