Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003211g0020 Nicotiana tabacum HOM05D007955 ORTHO05D010034 9.8e-70 266.5 122 100.0
Nitab4.5_0002013g0010 Nicotiana tabacum HOM05D007955 ORTHO05D010034 2.8e-64 248.4 122 91.8
Sopen11g011230 Solanum pennellii HOM05D007955 ORTHO05D010034 3.2e-44 181.8 123 74.0
Solyc11g021365.2 Solanum lycopersicum HOM05D007955 ORTHO05D010034 1.0e-42 176.8 122 68.9
Peaxi162Scf00391g00733 Petunia axillaris HOM05D007955 ORTHO05D010034 1.2e-38 163.3 122 67.2
PGSC0003DMG400009285 Solanum tuberosum HOM05D007955 ORTHO05D010034 1.3e-37 159.8 122 66.4
CANSAT25G1976 Cannabis sativa HOM05D007955 ORTHO05D010034 6.4e-37 157.5 107 68.2
Hund16783 Selenicereus undatus HOM05D007955 ORTHO05D010034 4.1e-36 154.8 85 78.8
HanXRQChr02g0044251 Helianthus annuus HOM05D007955 ORTHO05D010034 7.1e-36 154.1 84 81.0
TWI14G1427 Tripterygium wilfordii HOM05D007955 ORTHO05D010034 1.6e-35 152.9 91 72.5
Dinv41742 Davidia involucrata HOM05D007955 ORTHO05D010034 2.7e-35 152.1 122 60.7
Rhsim06G0114600 Rhododendron simsii HOM05D007955 ORTHO05D010034 2.7e-35 152.1 121 58.7
BcaC07g39172 Brassica carinata HOM05D007955 ORTHO05D010034 3.5e-35 151.8 103 68.9
CARHR023000 Cardamine hirsuta HOM05D007955 ORTHO05D010034 3.5e-35 151.8 103 68.9
CSS0011086 Camellia sinensis var. sinensis HOM05D007955 ORTHO05D010034 4.6e-35 151.4 80 80.0
arahy.Tifrunner.gnm1.ann1.6E9FUG Arachis hypogaea HOM05D007955 ORTHO05D010034 6.0e-35 151.0 84 81.0
arahy.Tifrunner.gnm1.ann1.T5U9L2 Arachis hypogaea HOM05D007955 ORTHO05D010034 6.0e-35 151.0 84 81.0
QL02p025993 Quercus lobata HOM05D007955 ORTHO05D010034 6.0e-35 151.0 125 57.6
Lsat_1_v5_gn_1_12280 Lactuca sativa HOM05D007955 ORTHO05D010034 7.8e-35 150.6 91 75.8
Sp1g20140 Schrenkiella parvula HOM05D007955 ORTHO05D010034 7.8e-35 150.6 103 68.9
BolC8t49802H Brassica oleracea HOM05D007955 ORTHO05D010034 1.3e-34 149.8 103 68.0
Thhalv10009125m.g Eutrema salsugineum HOM05D007955 ORTHO05D010034 1.3e-34 149.8 77 85.7
Potri.013G108100 Populus trichocarpa HOM05D007955 ORTHO05D010034 1.7e-34 149.4 76 84.2
RcHm_v2.0_Chr7g0228151 Rosa chinensis HOM05D007955 ORTHO05D010034 1.7e-34 149.4 85 76.5
PGR042G1239 Punica granatum HOM05D007955 ORTHO05D010034 2.3e-34 149.1 122 59.0
AT1G22630 Arabidopsis thaliana HOM05D007955 ORTHO05D010034 3.9e-34 148.3 84 78.6
EL10Ac1g00118 Beta vulgaris HOM05D007955 ORTHO05D010034 3.9e-34 148.3 126 61.1
FvH4_5g32101 Fragaria vesca HOM05D007955 ORTHO05D010034 3.9e-34 148.3 85 76.5
AL1G36160 Arabidopsis lyrata HOM05D007955 ORTHO05D010034 5.1e-34 147.9 84 78.6
Hma1.2p1_0004F.1_g003980 Hydrangea macrophylla HOM05D007955 ORTHO05D010034 5.1e-34 147.9 89 75.3
ECA247G2775 Erigeron canadensis HOM05D001035 ORTHO05D001045 8.6e-34 147.1 91 74.7
MD15G1408300 Malus domestica HOM05D007955 ORTHO05D010034 8.6e-34 147.1 122 59.0
Carub.0001s2214 Capsella rubella HOM05D007955 ORTHO05D010034 1.1e-33 146.7 84 77.4
Eucgr.F03002 Eucalyptus grandis HOM05D007955 ORTHO05D010034 1.1e-33 146.7 83 77.1
Sc23g0001440 Simmondsia chinensis HOM05D007955 ORTHO05D010034 1.1e-33 146.7 82 76.8
Duzib177G0365 Durio zibethinus HOM05D007955 ORTHO05D010034 1.9e-33 146.0 111 60.4
Gohir.A05G273100 Gossypium hirsutum HOM05D007955 ORTHO05D010034 2.5e-33 145.6 113 63.7
Gohir.D05G275500 Gossypium hirsutum HOM05D007955 ORTHO05D010034 3.3e-33 145.2 113 63.7
Gorai.009G288600 Gossypium raimondii HOM05D007955 ORTHO05D010034 3.3e-33 145.2 113 63.7
Manes.18G103900 Manihot esculenta HOM05D007955 ORTHO05D010034 3.3e-33 145.2 77 81.8
Aa31LG7G6520 Aethionema arabicum HOM05D007955 ORTHO05D010034 5.6e-33 144.4 111 62.2
Thecc.08G188200 Theobroma cacao HOM05D007955 ORTHO05D010034 1.6e-32 142.9 89 73.0
THA.LOC104809734 Tarenaya hassleriana HOM05D007955 ORTHO05D010034 3.6e-32 141.7 82 73.2
MBI03_g18672_MAGBIO Magnolia biondii HOM05D007955 ORTHO05D010034 1.1e-31 140.2 96 67.7
ClCG00G002970 Citrullus lanatus HOM05D007955 ORTHO05D010034 4.0e-31 138.3 92 69.6
ClCG09G017850 Citrullus lanatus HOM05D007955 ORTHO05D010034 4.0e-31 138.3 92 69.6
CDE05G3389 Ceratophyllum demersum HOM05D007955 ORTHO05D010034 1.5e-30 136.3 108 59.3
MELO3C021951.2 Cucumis melo HOM05D007955 ORTHO05D010034 2.6e-30 135.6 62 90.3
CsaV3_2G014460 Cucumis sativus L. HOM05D007955 ORTHO05D010034 2.6e-30 135.6 62 90.3
DCAR_001459 Daucus carota HOM05D007955 ORTHO05D010034 2.6e-30 135.6 84 70.2
Glyma.08G239000 Glycine max HOM05D007955 ORTHO05D010034 1.7e-29 132.9 80 76.2
VMungo1127G1330 Vigna mungo HOM05D007955 ORTHO05D010034 2.9e-29 132.1 85 70.6
C08p21650 Brassica napus HOM05D000726 ORTHO05D010034 4.9e-29 131.3 95 64.2
Migut.C01298 Erythranthe guttata HOM05D007955 ORTHO05D010034 4.2e-28 128.3 80 73.8
A08p28450 Brassica napus HOM05D000726 ORTHO05D010034 9.3e-28 127.1 94 64.9
Aqoxy6G00096 Aquilegia oxysepala HOM05D007955 ORTHO05D010034 1.0e-26 123.6 80 67.5
BraA08t34774Z Brassica rapa HOM05D000726 ORTHO05D010034 1.3e-26 123.2 107 57.9
Cfa012936 Carpinus fangiana HOM05D007955 ORTHO05D010034 8.7e-26 120.6 122 52.5
Haze_21296 Corylus avellana HOM05D007955 ORTHO05D010034 8.7e-26 120.6 110 54.5
CiPaw.07G236600 Carya illinoinensis HOM05D007955 ORTHO05D010034 4.3e-25 118.2 122 50.8
Nn3g20179 Nelumbo nucifera HOM05D007955 ORTHO05D010034 6.2e-24 114.4 120 54.2
SGA_v2.0_scaffold24G10574 Striga asiatica HOM05D007955 ORTHO05D010034 4.4e-22 108.2 84 64.3
HPP92_004623 Vanilla planifolia HOM05D007955 ORTHO05D010034 4.4e-22 108.2 101 52.5
Prupe.1G552800 Prunus persica HOM05D007955 ORTHO05D010034 9.9e-22 107.1 122 48.4
Pp3c19_10130 Physcomitrium patens HOM05D007955 ORTHO05D010034 1.3e-21 106.7 52 82.7
TPR.G34150 Trifolium pratense HOM05D007955 ORTHO05D010034 2.9e-21 105.5 87 63.2
Medtr4g032905 Medicago truncatula HOM05D007955 ORTHO05D010034 3.8e-21 105.1 120 46.7
PSO782G1662 Papaver somniferum HOM05D007955 ORTHO05D010034 2.7e-19 99.0 116 49.1
SMO119G0376 Selaginella moellendorffii HOM05D007955 ORTHO05D010034 4.6e-19 98.2 61 68.9
SEGI_23617 Sequoiadendron giganteum HOM05D007955 ORTHO05D010034 4.6e-19 98.2 119 47.1
unitig_578.g16590 Utricularia gibba HOM05D007955 ORTHO05D010034 4.6e-19 98.2 84 58.3
PSO170G1023 Papaver somniferum HOM05D007955 ORTHO05D010034 6.0e-19 97.8 109 50.5
Os05g0105800 Oryza sativa ssp. japonica HOM05D007955 ORTHO05D010034 7.9e-19 97.4 45 91.1
Cc00_g22060 Coffea canephora HOM05D007955 ORTHO05D010034 1.0e-18 97.1 94 56.4
vmacro12469 Vaccinium macrocarpon HOM05D007955 ORTHO05D010034 8.7e-18 94.0 46 87.0
AagrBONN_evm.TU.Sc2ySwM_228.898 Anthoceros agrestis HOM05D007955 ORTHO05D010034 9.6e-17 90.5 129 41.9
Zm00001eb356110 Zea mays HOM05D007955 ORTHO05D010034 1.3e-16 90.1 84 53.6
FAN08G1854 Fragaria x ananassa HOM05D000666 ORTHO05D001431 1.8e-15 86.3 56 67.9
FAN13G0857 Fragaria x ananassa HOM05D000666 ORTHO05D001431 5.3e-15 84.7 56 66.1
Mapoly0510s0001 Marchantia polymorpha HOM05D007955 ORTHO05D010034 2.0e-14 82.8 61 60.7
Sed0016691 Sechium edule HOM05D007955 ORTHO05D010034 1.4e-12 76.6 86 47.7
CBR_g36554 Chara braunii HOM05D007955 ORTHO05D010034 8.1e-08 60.8 30 80.0


User provided reference genes

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