Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003203g0060 Nicotiana tabacum HOM05D006288 ORTHO05D007416 2.9e-55 218.4 115 100.0
Peaxi162Scf00019g00316 Petunia axillaris HOM05D006288 ORTHO05D007416 1.4e-49 199.5 115 91.3
PGSC0003DMG400026550 Solanum tuberosum HOM05D006288 ORTHO05D007416 1.3e-47 193.0 112 92.0
Solyc02g065690.3 Solanum lycopersicum HOM05D006288 ORTHO05D007416 4.9e-47 191.0 112 91.1
Sopen02g015910 Solanum pennellii HOM05D006288 ORTHO05D007416 4.9e-47 191.0 112 91.1
vmacro18118 Vaccinium macrocarpon HOM05D006288 ORTHO05D007416 2.3e-44 182.2 114 83.3
CSS0015874 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 5.1e-44 181.0 114 82.5
CSS0028097 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 5.1e-44 181.0 114 82.5
Rhsim10G0068900 Rhododendron simsii HOM05D006288 ORTHO05D007416 1.1e-43 179.9 114 81.6
Migut.K00879 Erythranthe guttata HOM05D006288 ORTHO05D007416 1.9e-43 179.1 111 84.7
GSVIVG01036516001 Vitis vinifera HOM05D006288 ORTHO05D007416 3.3e-43 178.3 111 82.0
Dinv34894 Davidia involucrata HOM05D006288 ORTHO05D007416 4.3e-43 177.9 113 82.3
Oeu007090.1 Olea europaea HOM05D006288 ORTHO05D007416 4.3e-43 177.9 114 81.6
Rhsim08G0078400 Rhododendron simsii HOM05D006288 ORTHO05D007416 9.6e-43 176.8 114 80.7
Cc07_g04640 Coffea canephora HOM05D006288 ORTHO05D007416 1.3e-42 176.4 111 82.0
Hma1.2p1_0304F.1_g119265 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 2.8e-42 175.3 115 79.1
Hma1.2p1_0304F.1_g119270 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 2.8e-42 175.3 115 79.1
Manes.01G106000 Manihot esculenta HOM05D006288 ORTHO05D007416 8.1e-42 173.7 113 79.6
Gohir.D12G056100 Gossypium hirsutum HOM05D006288 ORTHO05D007416 1.1e-41 173.3 110 80.9
Gorai.008G059200 Gossypium raimondii HOM05D006288 ORTHO05D007416 1.1e-41 173.3 110 80.9
Duzib133G0644 Durio zibethinus HOM05D006288 ORTHO05D007416 1.4e-41 172.9 110 80.0
Duzib133G1254 Durio zibethinus HOM05D006288 ORTHO05D007416 1.4e-41 172.9 110 80.0
SGA_v2.0_scaffold30G12393 Striga asiatica HOM05D006288 ORTHO05D007416 1.4e-41 172.9 114 78.1
Gohir.A12G056700 Gossypium hirsutum HOM05D006288 ORTHO05D007416 5.3e-41 171.0 110 80.0
Thecc.10G108100 Theobroma cacao HOM05D005170 ORTHO05D007416 5.3e-41 171.0 109 80.7
CSS0029131 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 1.2e-40 169.9 114 78.1
TAR629G2245 Trochodendron aralioides HOM05D006288 ORTHO05D007416 2.0e-40 169.1 109 79.8
Prupe.3G247000 Prunus persica HOM05D006288 ORTHO05D007416 5.8e-40 167.5 112 77.7
SalBow7G0779 Salvia bowleyana HOM05D006288 ORTHO05D007416 9.9e-40 166.8 111 79.3
TWI60G1717 Tripterygium wilfordii HOM05D006288 ORTHO05D007416 9.9e-40 166.8 115 74.8
Cfa007713 Carpinus fangiana HOM05D006288 ORTHO05D007416 1.7e-39 166.0 110 78.2
PSO832G2920 Papaver somniferum HOM05D006288 ORTHO05D007416 2.2e-39 165.6 109 77.1
PSO210G6985 Papaver somniferum HOM05D006288 ORTHO05D007416 2.9e-39 165.2 109 76.1
PGR004G0851 Punica granatum HOM05D006288 ORTHO05D007416 4.9e-39 164.5 115 74.8
RcHm_v2.0_Chr2g0164421 Rosa chinensis HOM05D006288 ORTHO05D007416 6.4e-39 164.1 112 74.1
CiPaw.03G081300 Carya illinoinensis HOM05D006288 ORTHO05D007416 1.9e-38 162.5 110 78.2
Hund16253 Selenicereus undatus HOM05D006288 ORTHO05D007416 2.4e-38 162.2 114 72.8
Ca_13697_v3 Cicer arietinum L. HOM05D006288 ORTHO05D007416 3.2e-38 161.8 107 77.6
Lj3g0015520 Lotus japonicus HOM05D006288 ORTHO05D007416 3.2e-38 161.8 109 76.1
Manes.02G062500 Manihot esculenta HOM05D006288 ORTHO05D007416 3.2e-38 161.8 108 77.8
Psat5g210920 Pisum sativum HOM05D006288 ORTHO05D007416 3.2e-38 161.8 112 75.0
TPR.G14566 Trifolium pratense HOM05D006288 ORTHO05D007416 5.5e-38 161.0 116 74.1
Psat5g210840 Pisum sativum HOM05D006288 ORTHO05D007416 9.3e-38 160.2 112 74.1
Glyma.13G051400 Glycine max HOM05D006288 ORTHO05D007416 1.2e-37 159.8 109 75.2
Glyma.19G037000 Glycine max HOM05D006288 ORTHO05D007416 1.2e-37 159.8 109 76.1
Phvul.004G044700 Phaseolus vulgaris HOM05D006288 ORTHO05D007416 1.2e-37 159.8 107 75.7
Medtr3g034300 Medicago truncatula HOM05D006288 ORTHO05D007416 2.1e-37 159.1 116 73.3
PSO675G0562 Papaver somniferum HOM05D006288 ORTHO05D007416 2.1e-37 159.1 109 75.2
Atru.chr8.595 Acer truncatum HOM05D006288 ORTHO05D007416 2.7e-37 158.7 113 70.8
Sc11g0008960 Simmondsia chinensis HOM05D006288 ORTHO05D007416 2.7e-37 158.7 111 73.0
VMungo0464G1523 Vigna mungo HOM05D006288 ORTHO05D007416 2.7e-37 158.7 107 75.7
CSS0016762 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 3.5e-37 158.3 111 75.7
CSS0047986 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 3.5e-37 158.3 111 75.7
Lsat_1_v5_gn_4_174040 Lactuca sativa HOM05D006288 ORTHO05D007416 3.5e-37 158.3 113 72.6
Ah.16g100880 Amaranthus hybridus HOM05D006288 ORTHO05D007416 6.0e-37 157.5 114 71.1
PSO541G1058 Papaver somniferum HOM05D006288 ORTHO05D007416 6.0e-37 157.5 109 74.3
Eucgr.F02878 Eucalyptus grandis HOM05D006288 ORTHO05D007416 7.9e-37 157.1 112 71.4
CAN.G93.47 Capsicum annuum HOM05D006288 ORTHO05D007416 1.0e-36 156.8 111 76.6
Cpa.g.sc14.255 Carica papaya HOM05D006288 ORTHO05D007416 1.0e-36 156.8 105 76.2
Lalb_Chr21g0318141 Lupinus albus HOM05D006288 ORTHO05D007416 1.0e-36 156.8 109 71.6
arahy.Tifrunner.gnm1.ann1.J0I6JM Arachis hypogaea HOM05D006288 ORTHO05D007416 1.3e-36 156.4 109 72.5
MD17G1067500 Malus domestica HOM05D006288 ORTHO05D007416 1.3e-36 156.4 113 69.0
MD09G1077100 Malus domestica HOM05D006288 ORTHO05D007416 1.8e-36 156.0 111 72.1
Psat5g212400 Pisum sativum HOM05D006288 ORTHO05D007416 2.3e-36 155.6 113 70.8
ATR0691G027 Amborella trichopoda HOM05D006288 ORTHO05D007416 3.0e-36 155.2 105 72.4
QL09p029462 Quercus lobata HOM05D006288 ORTHO05D007416 3.0e-36 155.2 109 74.3
CsaV3_4G009920 Cucumis sativus L. HOM05D006288 ORTHO05D007416 6.7e-36 154.1 108 72.2
THA.LOC104805112 Tarenaya hassleriana HOM05D006288 ORTHO05D007416 4.3e-35 151.4 109 69.7
CANSAT64G2264 Cannabis sativa HOM05D005170 ORTHO05D007416 5.6e-35 151.0 107 71.0
Os02g0190900 Oryza sativa ssp. japonica HOM05D006288 ORTHO05D007416 7.4e-35 150.6 110 70.0
Actinidia17612 Actinidia chinensis HOM05D006288 ORTHO05D007416 4.0e-33 144.8 101 76.2
Zm00001eb234970 Zea mays HOM05D006288 ORTHO05D007416 5.3e-33 144.4 112 62.5
SEGI_23755 Sequoiadendron giganteum HOM05D006288 ORTHO05D007416 4.5e-32 141.4 106 65.1
unitig_32.g10759 Utricularia gibba HOM05D006288 ORTHO05D007416 4.5e-32 141.4 111 64.9
Nitab4.5_0002249g0090 Nicotiana tabacum HOM05D006288 ORTHO05D007416 5.8e-32 141.0 78 96.2
FAN10G3625 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.0e-31 140.2 99 71.7
HPP92_018391 Vanilla planifolia HOM05D006288 ORTHO05D007416 2.9e-31 138.7 106 67.0
Sabra17G0089200 Salix brachista HOM05D006288 ORTHO05D007416 8.4e-31 137.1 95 72.6
BolC7t44529H Brassica oleracea HOM05D006288 ORTHO05D007416 1.1e-30 136.7 104 64.4
C07p39960 Brassica napus HOM05D006288 ORTHO05D007416 1.4e-30 136.3 104 64.4
EL10Ac2g04409 Beta vulgaris HOM05D006288 ORTHO05D007416 1.9e-30 136.0 114 63.2
BraA06t26742Z Brassica rapa HOM05D006288 ORTHO05D007416 3.2e-30 135.2 104 63.5
AUR62023135 Chenopodium quinoa HOM05D006288 ORTHO05D007416 1.6e-29 132.9 114 59.6
FAN10G2886 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.1e-29 132.5 99 67.7
Atru.BG.156.p Acer truncatum HOM05D006288 ORTHO05D007416 3.5e-29 131.7 93 68.8
Nn4g23570 Nelumbo nucifera HOM05D006288 ORTHO05D007416 6.0e-29 131.0 116 63.8
FAN14G1171 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.3e-28 129.8 113 62.8
Actinidia26277 Actinidia chinensis HOM05D006288 ORTHO05D007416 2.3e-28 129.0 114 60.5
Hma1.2p1_2186F.1_g316383 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 4.3e-27 124.8 78 83.3
Hma1.2p1_3488F.1_g336360 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 4.3e-27 124.8 78 83.3
Lsat_1_v5_gn_4_173980 Lactuca sativa HOM05D006288 ORTHO05D007416 7.4e-27 124.0 113 58.4
CDE10G0042 Ceratophyllum demersum HOM05D006288 ORTHO05D007416 3.7e-26 121.7 89 66.3
COL.COLO4_00228 Corchorus olitorius HOM05D006288 ORTHO05D007416 4.8e-26 121.3 75 84.0
DCAR_011002 Daucus carota HOM05D006288 ORTHO05D007416 6.3e-26 120.9 75 82.7
ECA232G4388 Erigeron canadensis HOM05D006288 ORTHO05D007416 6.9e-25 117.5 113 55.8
TAR371G0310 Trochodendron aralioides HOM05D006288 ORTHO05D007416 1.2e-24 116.7 85 67.1
Potri.017G106200 Populus trichocarpa HOM05D006288 ORTHO05D007416 2.0e-24 115.9 109 56.9
Carub.0008s0943 Capsella rubella HOM05D006288 ORTHO05D007416 5.9e-24 114.4 110 54.5
MELO3C018910.2 Cucumis melo HOM05D006288 ORTHO05D007416 5.9e-24 114.4 108 55.6
ClCG07G016140 Citrullus lanatus HOM05D006288 ORTHO05D007416 1.0e-23 113.6 108 55.6
Sed0021882 Sechium edule HOM05D006288 ORTHO05D007416 3.8e-23 111.7 110 54.5
FAN05G5526 Fragaria x ananassa HOM05D006288 ORTHO05D007416 6.5e-23 110.9 113 55.8
Aa31LG7G12050 Aethionema arabicum HOM05D006288 ORTHO05D007416 1.6e-21 106.3 108 53.7
FAN02G0987 Fragaria x ananassa HOM05D006288 ORTHO05D007416 6.1e-21 104.4 113 54.0
FAN09G1057 Fragaria x ananassa HOM05D010582 ORTHO05D007416 6.1e-21 104.4 113 54.0
HanXRQChr15g0464891 Helianthus annuus HOM05D006288 ORTHO05D007416 1.3e-20 103.2 95 56.8
Thhalv10005135m.g Eutrema salsugineum HOM05D006288 ORTHO05D007416 1.3e-18 96.7 74 63.5
Mapoly0015s0174 Marchantia polymorpha HOM05D006288 ORTHO05D007416 1.3e-18 96.7 104 44.2
A09p04890 Brassica napus HOM05D006288 ORTHO05D007416 1.6e-18 96.3 107 49.5
BraA09t36127Z Brassica rapa HOM05D006288 ORTHO05D007416 1.6e-18 96.3 107 49.5
Eucgr.K01979 Eucalyptus grandis HOM05D006288 ORTHO05D007416 1.6e-18 96.3 91 61.5
Sp2g19860 Schrenkiella parvula HOM05D006288 ORTHO05D007416 2.8e-18 95.5 71 64.8
CARHR287980 Cardamine hirsuta HOM05D006288 ORTHO05D007416 3.7e-18 95.1 74 62.2
AL8G23340 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 4.8e-18 94.7 72 63.9
AL954U10010 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 4.8e-18 94.7 72 63.9
AT5G49550 Arabidopsis thaliana HOM05D006288 ORTHO05D007416 4.8e-18 94.7 72 63.9
AagrBONN_evm.TU.Sc2ySwM_344.2644 Anthoceros agrestis HOM05D006288 ORTHO05D007416 6.3e-18 94.4 104 43.3
BcaC04g23731 Brassica carinata HOM05D006288 ORTHO05D007416 6.3e-18 94.4 71 64.8
C09p05280 Brassica napus HOM05D006288 ORTHO05D007416 6.3e-18 94.4 71 64.8
BcaB04g19620 Brassica carinata HOM05D006288 ORTHO05D007416 8.2e-18 94.0 107 47.7
FvH4_6g46100 Fragaria vesca HOM05D006288 ORTHO05D007416 1.4e-17 93.2 113 50.4
FvH4_6g24710 Fragaria vesca HOM05D006288 ORTHO05D007416 3.1e-17 92.0 59 76.3
FAN14G4004 Fragaria x ananassa HOM05D006288 ORTHO05D007416 3.1e-17 92.0 59 76.3
Pp3c21_3840 Physcomitrium patens HOM05D006288 ORTHO05D007416 2.0e-16 89.4 106 43.4
SHI46878 Sapria himalayana HOM05D006288 ORTHO05D007416 5.0e-15 84.7 107 39.3
Psat6g174640 Pisum sativum HOM05D006288 ORTHO05D007416 1.1e-11 73.6 81 51.9
SMO358G0122 Selaginella moellendorffii HOM05D006288 ORTHO05D007416 4.3e-11 71.6 95 37.9
FAN03G1360 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.1e-09 67.0 55 61.8
Haze_03283 Corylus avellana HOM05D002280 ORTHO05D002322 1.4e-09 66.6 43 76.7


User provided reference genes

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