Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003202g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 1.3e-221 772.7 389 100.0
Nitab4.5_0000246g0110 Nicotiana tabacum HOM05D006105 ORTHO05D006345 5.0e-152 541.6 407 71.5
Peaxi162Scf00069g01930 Petunia axillaris HOM05D006105 ORTHO05D006345 2.0e-108 396.7 432 56.2
Nitab4.5_0005445g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 2.4e-101 373.2 431 53.1
Sopen12g005900 Solanum pennellii HOM05D006105 ORTHO05D006345 2.6e-92 343.2 418 51.0
PGSC0003DMG400015376 Solanum tuberosum HOM05D006105 ORTHO05D006345 8.7e-88 328.2 450 47.6
Solyc07g062685.2 Solanum lycopersicum HOM05D006105 ORTHO05D006345 1.9e-87 327.0 410 53.7
Sopen07g030920 Solanum pennellii HOM05D006105 ORTHO05D006345 2.4e-85 320.1 411 53.0
Nitab4.5_0003077g0030 Nicotiana tabacum HOM05D006105 ORTHO05D006345 2.5e-82 310.1 443 46.0
Peaxi162Scf00000g02515 Petunia axillaris HOM05D006105 ORTHO05D006345 2.7e-81 306.6 402 51.2
PGSC0003DMG400021273 Solanum tuberosum HOM05D006105 ORTHO05D006345 2.8e-62 243.4 388 44.3
Hma1.2p1_0416F.1_g148610 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 5.0e-59 232.6 389 42.4
CSS0026032 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 1.6e-57 227.6 425 42.1
Dinv14962 Davidia involucrata HOM05D006105 ORTHO05D006345 9.7e-55 218.4 385 42.1
PGSC0003DMG400012397 Solanum tuberosum HOM05D006105 ORTHO05D006345 7.0e-53 212.2 215 57.2
CSS0022090 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 1.6e-52 211.1 417 41.2
Hma1.2p1_0688F.1_g203660 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 2.5e-50 203.8 391 40.7
Actinidia35226 Actinidia chinensis HOM05D006105 ORTHO05D006345 4.2e-50 203.0 433 39.3
Solyc12g014120.3 Solanum lycopersicum HOM05D006105 ORTHO05D006345 4.7e-49 199.5 269 47.2
DCAR_019586 Daucus carota HOM05D006105 ORTHO05D006345 2.3e-48 197.2 403 39.0
QL08p027367 Quercus lobata HOM05D006105 ORTHO05D006345 3.0e-48 196.8 407 40.0
HanXRQChr10g0304731 Helianthus annuus HOM05D006105 ORTHO05D006345 6.3e-46 189.1 404 39.1
Actinidia18787 Actinidia chinensis HOM05D006105 ORTHO05D006345 7.0e-45 185.7 440 38.4
Cc05_g11450 Coffea canephora HOM05D006105 ORTHO05D006345 1.6e-44 184.5 253 45.8
Thecc.07G103600 Theobroma cacao HOM05D006105 ORTHO05D006345 1.3e-43 181.4 401 41.1
ECA234G3938 Erigeron canadensis HOM05D006105 ORTHO05D006345 5.0e-43 179.5 411 38.7
Rhsim04G0024000 Rhododendron simsii HOM05D006105 ORTHO05D006345 4.2e-42 176.4 437 35.9
Ciclev10010617m.g Citrus clementina HOM05D006105 ORTHO05D006345 1.6e-41 174.5 427 37.7
Sopen10g003350 Solanum pennellii HOM05D016660 ORTHO05D006345 1.6e-41 174.5 201 51.2
Oeu005394.1 Olea europaea HOM05D006105 ORTHO05D006345 2.7e-41 173.7 412 38.1
Prupe.4G171200 Prunus persica HOM05D006105 ORTHO05D006345 4.7e-41 172.9 459 34.9
Cfa019604 Carpinus fangiana HOM05D006105 ORTHO05D006345 6.1e-41 172.6 397 38.8
MSTRG.14950 Avicennia marina HOM05D006105 ORTHO05D006345 1.0e-40 171.8 384 38.5
Lj8A152T79 Lonicera japonica HOM05D006105 ORTHO05D006345 1.0e-40 171.8 301 42.5
Haze_09360 Corylus avellana HOM05D006105 ORTHO05D006345 5.2e-40 169.5 407 38.3
Duzib268G0903 Durio zibethinus HOM05D006105 ORTHO05D006345 1.2e-39 168.3 424 39.6
GSVIVG01014239001 Vitis vinifera HOM05D006105 ORTHO05D006345 1.2e-39 168.3 412 36.7
CSS0004572 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 1.7e-38 164.5 216 46.3
DCAR_013141 Daucus carota HOM05D006105 ORTHO05D006345 3.7e-38 163.3 394 37.1
Cpa.g.sc131.73 Carica papaya HOM05D006105 ORTHO05D006345 1.6e-36 157.9 444 35.6
Duzib213G0100 Durio zibethinus HOM05D006105 ORTHO05D006345 7.7e-36 155.6 466 35.4
MSTRG.14216 Avicennia marina HOM05D006105 ORTHO05D006345 1.3e-35 154.8 430 35.6
Manes.03G103501 Manihot esculenta HOM05D006105 ORTHO05D006345 1.7e-35 154.5 405 35.3
TWI38G0440 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 8.6e-35 152.1 414 35.0
Rhsim06G0204700 Rhododendron simsii HOM05D006105 ORTHO05D006345 1.1e-34 151.8 447 34.9
TAR629G1657 Trochodendron aralioides HOM05D006105 ORTHO05D006345 2.5e-34 150.6 435 35.2
Gohir.A08G021700 Gossypium hirsutum HOM05D006105 ORTHO05D006345 4.3e-34 149.8 417 36.2
HanXRQChr12g0372831 Helianthus annuus HOM05D006105 ORTHO05D006345 4.3e-34 149.8 379 36.9
MD03G1238800 Malus domestica HOM05D006105 ORTHO05D006345 7.2e-34 149.1 436 34.6
DCAR_024487 Daucus carota HOM05D006105 ORTHO05D006345 1.2e-33 148.3 280 37.1
CiPaw.12G115300 Carya illinoinensis HOM05D006105 ORTHO05D006345 1.6e-33 147.9 412 35.9
Oeu059277.1 Olea europaea HOM05D006105 ORTHO05D006345 1.6e-33 147.9 406 34.5
FAN21G1974 Fragaria x ananassa HOM05D006105 ORTHO05D006345 8.0e-33 145.6 449 32.7
Actinidia07497 Actinidia chinensis HOM05D006105 ORTHO05D006345 1.4e-32 144.8 416 35.1
COL.COLO4_17616 Corchorus olitorius HOM05D006105 ORTHO05D006345 1.8e-32 144.4 444 36.3
Gorai.004G029900 Gossypium raimondii HOM05D006105 ORTHO05D006345 1.8e-32 144.4 417 35.7
DCAR_021012 Daucus carota HOM05D006105 ORTHO05D006345 2.3e-32 144.1 385 36.9
Solyc10g007156.2 Solanum lycopersicum HOM05D016660 ORTHO05D006345 2.3e-32 144.1 178 48.3
Dinv18338 Davidia involucrata HOM05D006105 ORTHO05D006345 1.2e-31 141.7 306 39.9
Oeu061338.1 Olea europaea HOM05D006105 ORTHO05D006345 1.5e-31 141.4 213 47.4
Gohir.D08G032500 Gossypium hirsutum HOM05D006105 ORTHO05D006345 3.4e-31 140.2 420 36.0
FvH4_3g18750 Fragaria vesca HOM05D006105 ORTHO05D006345 5.7e-31 139.4 457 31.3
FAN25G1303 Fragaria x ananassa HOM05D006105 ORTHO05D006345 7.5e-31 139.0 455 31.4
RcHm_v2.0_Chr5g0031561 Rosa chinensis HOM05D006105 ORTHO05D006345 9.8e-31 138.7 426 34.5
CiPaw.11G164300 Carya illinoinensis HOM05D006105 ORTHO05D006345 1.7e-30 137.9 418 34.4
Nn1g09023 Nelumbo nucifera HOM05D006105 ORTHO05D006345 3.7e-30 136.7 438 35.2
Potri.001G375600 Populus trichocarpa HOM05D006105 ORTHO05D006345 2.4e-29 134.0 418 32.8
FAN16G1829 Fragaria x ananassa HOM05D006105 ORTHO05D006345 5.4e-29 132.9 455 31.4
Lsat_1_v5_gn_5_129201 Lactuca sativa HOM05D006105 ORTHO05D006345 1.2e-28 131.7 398 33.4
VMungo1080G1877 Vigna mungo HOM05D006105 ORTHO05D006345 2.0e-28 131.0 412 34.0
TAR629G0423 Trochodendron aralioides HOM05D000109 ORTHO05D000965 4.6e-28 129.8 428 32.5
FAN11G0448 Fragaria x ananassa HOM05D006105 ORTHO05D006345 7.8e-28 129.0 458 30.1
Glyma.13G271900 Glycine max HOM05D006105 ORTHO05D006345 6.6e-27 125.9 411 34.1
Gorai.002G064700 Gossypium raimondii HOM05D006105 ORTHO05D006345 6.6e-27 125.9 428 34.1
Atru.chr2.2260 Acer truncatum HOM05D006105 ORTHO05D006345 1.1e-26 125.2 364 35.2
TWI39G0145 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 1.5e-26 124.8 395 34.4
Glyma.12G228100 Glycine max HOM05D006105 ORTHO05D006345 4.3e-26 123.2 409 33.5
AUR62019562 Chenopodium quinoa HOM05D006105 ORTHO05D006345 1.6e-25 121.3 423 33.3
PSO541G5705 Papaver somniferum HOM05D006105 ORTHO05D006345 1.6e-25 121.3 430 31.2
SGA_v2.0_scaffold34G13768 Striga asiatica HOM05D006105 ORTHO05D006345 6.2e-25 119.4 397 32.0
Phvul.005G068000 Phaseolus vulgaris HOM05D006105 ORTHO05D006345 8.0e-25 119.0 411 32.1
Gohir.D01G045100 Gossypium hirsutum HOM05D006105 ORTHO05D006345 1.0e-24 118.6 426 32.6
AUR62037870 Chenopodium quinoa HOM05D006105 ORTHO05D006345 1.8e-24 117.9 420 32.1
PSO675G6909 Papaver somniferum HOM05D006105 ORTHO05D006345 1.8e-24 117.9 450 29.8
Sc03g0010360 Simmondsia chinensis HOM05D006105 ORTHO05D006345 3.1e-24 117.1 340 35.9
SGA_v2.0_scaffold73G24208 Striga asiatica HOM05D006105 ORTHO05D006345 6.8e-24 115.9 413 32.0
MD11G1258600 Malus domestica HOM05D006105 ORTHO05D006345 1.3e-22 111.7 426 30.3
SalBow8G2605 Salvia bowleyana HOM05D006105 ORTHO05D006345 3.7e-22 110.2 400 30.5
Aqoxy1G02199 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 6.4e-22 109.4 429 29.1
Lj3g0024128 Lotus japonicus HOM05D006105 ORTHO05D006345 1.4e-21 108.2 407 32.7
CsaV3_4G033280 Cucumis sativus L. HOM05D006105 ORTHO05D006345 3.2e-21 107.1 427 32.8
Lalb_Chr25g0286021 Lupinus albus HOM05D006105 ORTHO05D006345 1.6e-20 104.8 411 30.7
Sabra16G0247400 Salix brachista HOM05D006105 ORTHO05D006345 1.6e-20 104.8 418 31.8
MBI07_g17039_MAGBIO Magnolia biondii HOM05D006105 ORTHO05D006345 7.8e-20 102.4 392 34.4
Sed0005720 Sechium edule HOM05D006105 ORTHO05D006345 1.1e-18 98.6 423 32.4
Medtr2g078220 Medicago truncatula HOM05D006105 ORTHO05D006345 1.9e-18 97.8 442 29.0
MELO3C016090.2 Cucumis melo HOM05D006105 ORTHO05D006345 2.5e-18 97.4 438 30.6
PGSC0003DMG400044967 Solanum tuberosum HOM05D016660 ORTHO05D006345 4.3e-18 96.7 389 27.5
MELO3C025628.2 Cucumis melo HOM05D006105 ORTHO05D006345 5.6e-18 96.3 429 31.7
TPR.G9213 Trifolium pratense HOM05D006105 ORTHO05D006345 7.3e-18 95.9 431 30.4
ClCG07G009910 Citrullus lanatus HOM05D006105 ORTHO05D006345 9.5e-18 95.5 409 33.0
SalBow7G2198 Salvia bowleyana HOM05D006105 ORTHO05D006345 1.6e-17 94.7 403 31.3
SalBow7G3373 Salvia bowleyana HOM05D006105 ORTHO05D006345 2.8e-17 94.0 403 31.3
arahy.Tifrunner.gnm1.ann1.KE6FEG Arachis hypogaea HOM05D006105 ORTHO05D006345 3.6e-17 93.6 402 29.1
Sopen10g003360 Solanum pennellii HOM05D016660 ORTHO05D006345 4.7e-17 93.2 392 27.8
arahy.Tifrunner.gnm1.ann1.TTJ9YL Arachis hypogaea HOM05D006105 ORTHO05D006345 2.3e-16 90.9 395 30.4
Ca_04016_v3 Cicer arietinum L. HOM05D006105 ORTHO05D006345 3.1e-16 90.5 451 30.2
Manes.17G052800 Manihot esculenta HOM05D013066 ORTHO05D010890 3.1e-16 90.5 406 30.8
ClCG11G017660 Citrullus lanatus HOM05D006105 ORTHO05D006345 8.9e-16 89.0 432 31.0
Gohir.A01G059000 Gossypium hirsutum HOM05D006105 ORTHO05D006345 8.9e-16 89.0 236 36.9
arahy.Tifrunner.gnm1.ann1.LEI4AX Arachis hypogaea HOM05D006105 ORTHO05D006345 1.2e-15 88.6 414 28.3
CsaV3_4G008420 Cucumis sativus L. HOM05D006105 ORTHO05D006345 2.6e-15 87.4 426 30.3
Migut.M00751 Erythranthe guttata HOM05D006105 ORTHO05D006345 5.8e-15 86.3 384 32.3
PGSC0003DMG400021274 Solanum tuberosum HOM05D016660 ORTHO05D006345 7.5e-15 85.9 382 27.5
Sopen10g003370 Solanum pennellii HOM05D016660 ORTHO05D006345 9.8e-15 85.5 388 26.5
ECA236G3415 Erigeron canadensis HOM05D006105 ORTHO05D006345 1.3e-14 85.1 202 36.6
Eucgr.F01202 Eucalyptus grandis HOM05D006105 ORTHO05D006345 2.9e-14 84.0 272 34.6
Sed0015488 Sechium edule HOM05D006105 ORTHO05D006345 2.4e-13 80.9 416 30.5
Dinv17387 Davidia involucrata HOM05D006105 ORTHO05D006345 1.6e-12 78.2 424 28.5
Oeu051102.1 Olea europaea HOM05D006105 ORTHO05D006345 1.6e-12 78.2 99 48.5
Glyma.06G232600 Glycine max HOM05D006105 ORTHO05D006345 2.1e-12 77.8 381 28.9
Lsat_1_v5_gn_7_103061 Lactuca sativa HOM05D006105 ORTHO05D006345 2.1e-12 77.8 395 29.4
Nn1g04330 Nelumbo nucifera HOM05D006105 ORTHO05D006345 4.6e-12 76.6 253 34.0
Manes.16G035200 Manihot esculenta HOM05D013066 ORTHO05D006345 6.0e-12 76.3 401 27.7
PGSC0003DMG400044091 Solanum tuberosum HOM05D016660 ORTHO05D006345 3.0e-11 73.9 114 43.0
TAR627G0886 Trochodendron aralioides HOM05D000157 ORTHO05D006345 6.6e-11 72.8 237 35.4
Psat5g240600 Pisum sativum HOM05D006105 ORTHO05D006345 1.1e-10 72.0 302 30.5
VMungo1127G1756 Vigna mungo HOM05D006105 ORTHO05D006345 7.3e-10 69.3 242 34.3
CANSAT35G1552 Cannabis sativa HOM05D006105 ORTHO05D006345 8.1e-09 65.9 425 26.8
ATR0602G093 Amborella trichopoda HOM05D006105 ORTHO05D006345 1.1e-08 65.5 425 25.6
PGR083G1480 Punica granatum HOM05D006105 ORTHO05D006345 1.8e-08 64.7 392 26.3
Gohir.A13G148200 Gossypium hirsutum HOM05D006105 ORTHO05D006345 5.2e-08 63.2 267 31.8
SEGI_16969 Sequoiadendron giganteum HOM05D016559 ORTHO05D019650 2.6e-07 60.8 294 29.6
Thecc.06G176400 Theobroma cacao HOM05D013066 ORTHO05D010890 5.8e-07 59.7 447 28.0
Migut.H01972 Erythranthe guttata HOM05D006105 ORTHO05D006345 1.3e-06 58.5 179 31.3
Sed0026435 Sechium edule HOM05D006105 ORTHO05D006345 1.3e-06 58.5 321 30.8


User provided reference genes

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