Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003202g0020 Nicotiana tabacum HOM05D026705 ORTHO05D015804 1.5e-98 362.8 182 100.0
Nitab4.5_0001470g0010 Nicotiana tabacum HOM05D026705 ORTHO05D015804 6.0e-31 138.3 162 52.5
Nitab4.5_0004210g0010 Nicotiana tabacum HOM05D026705 ORTHO05D015804 1.5e-21 107.1 106 57.5
Lj4g0021408 Lotus japonicus HOM05D003900 ORTHO05D015804 3.6e-20 102.4 193 36.8
Solyc01g095110.4 Solanum lycopersicum HOM05D003900 ORTHO05D005009 1.9e-13 80.1 48 79.2
QL04p055515 Quercus lobata HOM05D003900 ORTHO05D005009 1.2e-10 70.9 52 63.5
Aqoxy4G01271 Aquilegia oxysepala HOM05D000855 ORTHO05D016547 2.6e-10 69.7 170 28.8
Actinidia10074 Actinidia chinensis HOM05D026705 ORTHO05D015804 7.6e-10 68.2 107 38.3
Oeu015216.1 Olea europaea HOM05D003900 ORTHO05D005009 7.6e-10 68.2 50 62.0
PGSC0003DMG400000195 Solanum tuberosum HOM05D003900 ORTHO05D005009 1.7e-09 67.0 42 78.6
CsaV3_7G025780 Cucumis sativus L. HOM05D003900 ORTHO05D005009 2.9e-09 66.2 85 43.5
Lj7C507T1 Lonicera japonica HOM05D003900 ORTHO05D005009 1.9e-08 63.5 48 62.5
CiPaw.01G066800 Carya illinoinensis HOM05D003900 ORTHO05D005009 3.2e-08 62.8 93 39.8
RcHm_v2.0_Chr7g0228291 Rosa chinensis HOM05D003900 ORTHO05D005009 3.2e-08 62.8 52 51.9
Medtr8g463610 Medicago truncatula HOM05D006503 ORTHO05D008116 9.3e-08 61.2 190 24.7
Oeu051440.2 Olea europaea HOM05D006080 ORTHO05D007382 6.0e-07 58.5 126 26.2
QL09p032747 Quercus lobata HOM05D000424 ORTHO05D000355 7.9e-07 58.2 167 26.3
Ciclev10030383m.g Citrus clementina HOM05D000855 ORTHO05D000003 1.0e-06 57.8 172 26.2
PSO017G1665 Papaver somniferum HOM05D015807 ORTHO05D011376 1.0e-06 57.8 150 27.3
SalBow3G3666 Salvia bowleyana HOM05D003900 ORTHO05D005009 1.3e-06 57.4 46 56.5
Nitab4.5_0000915g0110 Nicotiana tabacum HOM05D003900 ORTHO05D005009 1.8e-06 57.0 52 59.6
Nitab4.5_0010695g0010 Nicotiana tabacum HOM05D003900 ORTHO05D005009 1.8e-06 57.0 52 59.6
Rhsim07G0010500 Rhododendron simsii HOM05D003900 ORTHO05D005009 1.8e-06 57.0 40 65.0
Sopen01g038900 Solanum pennellii HOM05D003900 ORTHO05D005009 1.8e-06 57.0 49 61.2
DCAR_009464 Daucus carota HOM05D000104 ORTHO05D009920 2.3e-06 56.6 117 28.2
BolC3t13332H Brassica oleracea HOM05D007455 ORTHO05D009431 5.1e-06 55.5 82 37.8
vmacro08467 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 6.7e-06 55.1 167 28.1
Oeu007697.1 Olea europaea HOM05D005287 ORTHO05D006893 8.7e-06 54.7 120 30.0
PSO170G2530 Papaver somniferum HOM05D008994 ORTHO05D010954 8.7e-06 54.7 105 28.6


User provided reference genes

Program Settings