Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003201g0010 Nicotiana tabacum HOM05D007454 ORTHO05D009382 2.3e-78 295.4 145 100.0
Nitab4.5_0000125g0360 Nicotiana tabacum HOM05D007454 ORTHO05D009382 7.8e-74 280.4 145 94.5
Solyc08g067630.3 Solanum lycopersicum HOM05D007454 ORTHO05D009382 8.9e-62 240.4 152 80.3
PGSC0003DMG400002261 Solanum tuberosum HOM05D007454 ORTHO05D009382 3.9e-57 224.9 155 76.8
CAN.G506.13 Capsicum annuum HOM05D007454 ORTHO05D009382 1.1e-56 223.4 148 76.4
Sopen08g021580 Solanum pennellii HOM05D007454 ORTHO05D009382 3.6e-39 165.2 102 83.3
CSS0001844 Camellia sinensis var. sinensis HOM05D007454 ORTHO05D009382 6.4e-36 154.5 148 52.0
Rhsim02G0189300 Rhododendron simsii HOM05D007454 ORTHO05D009382 1.1e-32 143.7 147 50.3
Actinidia29311 Actinidia chinensis HOM05D007454 ORTHO05D009382 2.1e-31 139.4 149 51.0
Actinidia13275 Actinidia chinensis HOM05D007454 ORTHO05D009382 2.8e-31 139.0 147 51.0
Manes.16G117700 Manihot esculenta HOM05D007454 ORTHO05D009382 4.8e-31 138.3 154 49.4
Manes.03G018900 Manihot esculenta HOM05D007454 ORTHO05D009382 2.4e-30 136.0 151 49.7
Thecc.09G146500 Theobroma cacao HOM05D007454 ORTHO05D009382 1.7e-28 129.8 147 45.6
FAN15G1931 Fragaria x ananassa HOM05D007454 ORTHO05D009382 2.2e-28 129.4 150 49.3
RcHm_v2.0_Chr6g0298931 Rosa chinensis HOM05D007454 ORTHO05D009382 3.8e-28 128.6 150 49.3
QL12p031592 Quercus lobata HOM05D007454 ORTHO05D009382 1.9e-27 126.3 152 47.4
FAN20G1122 Fragaria x ananassa HOM05D007454 ORTHO05D009382 2.4e-27 125.9 142 50.7
Potri.006G248300 Populus trichocarpa HOM05D007454 ORTHO05D009382 3.2e-27 125.6 149 49.0
FvH4_2g29860 Fragaria vesca HOM05D007454 ORTHO05D009382 5.5e-27 124.8 148 49.3
Cc11_g01380 Coffea canephora HOM05D007454 ORTHO05D009382 7.1e-27 124.4 156 44.2
Sabra06G0194300 Salix brachista HOM05D007454 ORTHO05D009382 9.3e-27 124.0 150 47.3
TAR383G0100 Trochodendron aralioides HOM05D007454 ORTHO05D009382 9.3e-27 124.0 148 45.9
Gorai.007G350400 Gossypium raimondii HOM05D007454 ORTHO05D009382 1.6e-26 123.2 149 42.3
FAN24G1693 Fragaria x ananassa HOM05D007454 ORTHO05D009382 3.5e-26 122.1 148 48.6
COL.COLO4_24027 Corchorus olitorius HOM05D007454 ORTHO05D009382 4.6e-26 121.7 145 42.1
Migut.A00288 Erythranthe guttata HOM05D007454 ORTHO05D009382 1.0e-25 120.6 141 47.5
FAN27G1093 Fragaria x ananassa HOM05D007454 ORTHO05D009382 1.0e-25 120.6 151 47.0
Atru.chr7.2345 Acer truncatum HOM05D007454 ORTHO05D009382 1.3e-25 120.2 154 47.4
CiPaw.08G014500 Carya illinoinensis HOM05D007454 ORTHO05D009382 1.8e-25 119.8 159 43.4
Gohir.D11G320200 Gossypium hirsutum HOM05D007454 ORTHO05D009382 2.3e-25 119.4 149 42.3
MD15G1117600 Malus domestica HOM05D007454 ORTHO05D009382 2.3e-25 119.4 145 49.0
TAR626G1515 Trochodendron aralioides HOM05D007454 ORTHO05D009382 3.0e-25 119.0 145 43.4
TWI34G0809 Tripterygium wilfordii HOM05D007454 ORTHO05D009382 3.9e-25 118.6 149 43.6
Cfa013203 Carpinus fangiana HOM05D007454 ORTHO05D009382 5.1e-25 118.2 145 47.6
Gohir.A11G304800 Gossypium hirsutum HOM05D007454 ORTHO05D009382 5.1e-25 118.2 149 41.6
Oeu032495.1 Olea europaea HOM05D007454 ORTHO05D009382 8.7e-25 117.5 146 41.8
Haze_21608 Corylus avellana HOM05D007454 ORTHO05D009382 1.1e-24 117.1 150 48.0
Dinv11595 Davidia involucrata HOM05D007454 ORTHO05D009382 1.9e-24 116.3 106 54.7
DCAR_001472 Daucus carota HOM05D007454 ORTHO05D009382 1.3e-23 113.6 147 43.5
Nn2g11862 Nelumbo nucifera HOM05D007454 ORTHO05D009382 8.2e-23 110.9 161 42.9
Prupe.1G471000 Prunus persica HOM05D007454 ORTHO05D009382 1.1e-22 110.5 154 48.1
Lsat_1_v5_gn_1_45380 Lactuca sativa HOM05D007454 ORTHO05D009382 3.1e-22 109.0 150 42.0
Duzib150G0674 Durio zibethinus HOM05D007454 ORTHO05D009382 4.0e-22 108.6 113 48.7
Cpa.g.sc603.1 Carica papaya HOM05D007454 ORTHO05D009382 6.9e-22 107.8 130 43.8
MD08G1140700 Malus domestica HOM05D007454 ORTHO05D009382 2.0e-21 106.3 145 42.8
Ciclev10009811m.g Citrus clementina HOM05D007454 ORTHO05D009382 4.5e-21 105.1 155 43.2
HanXRQChr01g0030031 Helianthus annuus HOM05D007454 ORTHO05D009382 1.7e-20 103.2 152 40.1
Sed0012550 Sechium edule HOM05D007454 ORTHO05D009382 4.9e-20 101.7 143 38.5
Glyma.06G072000 Glycine max HOM05D007454 ORTHO05D009382 8.4e-20 100.9 148 42.6
CiPaw.07G219000 Carya illinoinensis HOM05D007454 ORTHO05D009382 5.5e-19 98.2 159 39.0
Phvul.009G096400 Phaseolus vulgaris HOM05D007454 ORTHO05D009382 9.3e-19 97.4 136 41.9
ECA248G0251 Erigeron canadensis HOM05D007454 ORTHO05D009382 1.6e-18 96.7 149 38.9
Lalb_Chr23g0268861 Lupinus albus HOM05D007454 ORTHO05D009382 3.5e-18 95.5 160 38.8
Glyma.04G070000 Glycine max HOM05D007454 ORTHO05D009382 6.0e-18 94.7 140 42.1
EL10Ac2g02557 Beta vulgaris HOM05D007454 ORTHO05D009382 1.0e-17 94.0 160 38.1
ClCG05G017140 Citrullus lanatus HOM05D007454 ORTHO05D009382 1.3e-17 93.6 143 42.0
unitig_748.g8205 Utricularia gibba HOM05D007454 ORTHO05D009382 1.3e-17 93.6 132 38.6
Aqoxy7G01923 Aquilegia oxysepala HOM05D007454 ORTHO05D009382 2.3e-17 92.8 144 41.0
VMungo1309G0733 Vigna mungo HOM05D007454 ORTHO05D009382 3.0e-17 92.4 113 46.0
arahy.Tifrunner.gnm1.ann1.X4UCF1 Arachis hypogaea HOM05D007454 ORTHO05D009382 5.1e-17 91.7 144 38.2
Lj1g0018180 Lotus japonicus HOM05D007454 ORTHO05D009382 6.7e-17 91.3 162 36.4
arahy.Tifrunner.gnm1.ann1.AC8RV3 Arachis hypogaea HOM05D007454 ORTHO05D009382 4.3e-16 88.6 146 37.0
ClCG08G012990 Citrullus lanatus HOM05D007454 ORTHO05D009382 4.3e-16 88.6 148 35.8
Eucgr.C01807 Eucalyptus grandis HOM05D007454 ORTHO05D009382 5.7e-16 88.2 161 41.0
CsaV3_3G046620 Cucumis sativus L. HOM05D007454 ORTHO05D009382 1.6e-15 86.7 123 38.2
Sed0003243 Sechium edule HOM05D007454 ORTHO05D009382 2.2e-15 86.3 158 36.7
MELO3C003676.2 Cucumis melo HOM05D007454 ORTHO05D009382 4.8e-15 85.1 146 34.9
Hund25693 Selenicereus undatus HOM05D007454 ORTHO05D009382 6.3e-15 84.7 162 43.2
THA.LOC104803822 Tarenaya hassleriana HOM05D007454 ORTHO05D009382 1.4e-14 83.6 154 38.3
CsaV3_2G031720 Cucumis sativus L. HOM05D007454 ORTHO05D009382 1.8e-14 83.2 141 34.0
SalBow4G3079 Salvia bowleyana HOM05D007454 ORTHO05D009382 3.1e-14 82.4 78 55.1
Sc09g0008740 Simmondsia chinensis HOM05D007454 ORTHO05D009382 3.1e-14 82.4 154 36.4
Ca_15708_v3 Cicer arietinum L. HOM05D007454 ORTHO05D009382 4.1e-14 82.0 147 40.1
Thhalv10000347m.g Eutrema salsugineum HOM05D007454 ORTHO05D009382 5.3e-14 81.6 155 37.4
AL4G17110 Arabidopsis lyrata HOM05D007454 ORTHO05D009382 6.9e-14 81.3 153 36.6
Carub.0004s0541 Capsella rubella HOM05D007454 ORTHO05D009382 1.2e-13 80.5 152 37.5
CARHR115660 Cardamine hirsuta HOM05D007454 ORTHO05D009382 1.2e-13 80.5 155 35.5
Sp4g05200 Schrenkiella parvula HOM05D007454 ORTHO05D009382 1.2e-13 80.5 153 37.3
MELO3C011223.2 Cucumis melo HOM05D007454 ORTHO05D009382 1.5e-13 80.1 109 40.4
Medtr3g107890 Medicago truncatula HOM05D007454 ORTHO05D009382 1.5e-13 80.1 162 36.4
AT2G25625 Arabidopsis thaliana HOM05D007454 ORTHO05D009382 2.0e-13 79.7 153 35.9
PSO170G5517 Papaver somniferum HOM05D007454 ORTHO05D009382 2.0e-13 79.7 160 39.4
PSO017G6963 Papaver somniferum HOM05D007454 ORTHO05D009382 1.0e-12 77.4 130 42.3
TPR.G27330 Trifolium pratense HOM05D007454 ORTHO05D009382 1.7e-12 76.6 172 33.1
BraA04t17571Z Brassica rapa HOM05D007454 ORTHO05D009382 3.8e-12 75.5 156 39.1
Sed0011711 Sechium edule HOM05D007454 ORTHO05D009382 3.8e-12 75.5 135 36.3
A04p19830 Brassica napus HOM05D007454 ORTHO05D009382 8.5e-12 74.3 156 38.5
CDE07G1568 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 8.5e-12 74.3 126 36.5
BcaB06g28081 Brassica carinata HOM05D007454 ORTHO05D009382 1.1e-11 73.9 154 37.7
BcaC02g08336 Brassica carinata HOM05D007454 ORTHO05D009382 2.5e-11 72.8 154 35.7
C04p55570 Brassica napus HOM05D007454 ORTHO05D009382 2.5e-11 72.8 154 35.7
BolC4t27081H Brassica oleracea HOM05D007454 ORTHO05D009382 2.5e-11 72.8 154 35.7
TPR.G34694 Trifolium pratense HOM05D007454 ORTHO05D009382 7.2e-11 71.2 149 33.6
CDE06G2386 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 2.1e-10 69.7 120 36.7
Zm00001eb296620 Zea mays HOM05D007454 ORTHO05D009382 2.7e-10 69.3 116 33.6
Psat5g027000 Pisum sativum HOM05D007454 ORTHO05D009382 1.0e-09 67.4 67 52.2
MBI01_g03566_MAGBIO Magnolia biondii HOM05D007454 ORTHO05D009382 1.1e-08 63.9 131 34.4
Os05g0575000 Oryza sativa ssp. japonica HOM05D007454 ORTHO05D009382 9.7e-08 60.8 36 63.9
CDE06G2168 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 2.4e-06 56.2 40 55.0
Aa31LG1G8530 Aethionema arabicum HOM05D007454 ORTHO05D009382 3.1e-06 55.8 154 28.6
CANSAT11G0218 Cannabis sativa HOM05D007454 ORTHO05D009382 4.1e-06 55.5 166 30.1


User provided reference genes

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