Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003194g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009561 2.7e-41 171.8 101 100.0
Nitab4.5_0001023g0170 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.8e-32 142.5 101 75.2
Nitab4.5_0007351g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.3e-31 137.9 100 73.0
Nitab4.5_0003892g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009561 5.7e-31 137.5 101 72.3
Nitab4.5_0002845g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009561 7.4e-31 137.1 98 75.5
Nitab4.5_0002581g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.6e-30 136.0 98 73.5
Nitab4.5_0005665g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.2e-30 135.6 98 73.5
Nitab4.5_0004504g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009561 3.7e-30 134.8 98 73.5
Nitab4.5_0021453g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.2e-26 121.3 99 68.7
Nitab4.5_0001107g0130 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.8e-22 107.8 63 87.3
Nitab4.5_0001461g0090 Nicotiana tabacum HOM05D004064 ORTHO05D009561 4.8e-22 107.8 78 70.5
Nitab4.5_0003166g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.2e-19 99.0 69 73.9
Nitab4.5_0009324g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009561 2.9e-19 98.6 90 63.3
Nitab4.5_0001499g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.7e-14 82.8 92 55.4
Nitab4.5_0002311g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.8e-14 82.0 79 58.2
PGSC0003DMG400014991 Solanum tuberosum HOM05D004064 ORTHO05D009561 3.7e-14 81.6 102 48.0
Nitab4.5_0008390g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009561 2.4e-13 79.0 77 57.1
Sopen04g022370 Solanum pennellii HOM05D000017 ORTHO05D011910 3.1e-13 78.6 92 45.7
PGSC0003DMG400046188 Solanum tuberosum HOM05D004064 ORTHO05D011910 4.1e-13 78.2 88 47.7
Sopen02g014660 Solanum pennellii HOM05D000017 ORTHO05D011910 5.3e-13 77.8 92 45.7
Sopen04g015180 Solanum pennellii HOM05D000004 ORTHO05D011910 5.3e-13 77.8 92 45.7
Sopen05g004820 Solanum pennellii HOM05D000072 ORTHO05D011910 5.3e-13 77.8 92 45.7
Sopen08g008550 Solanum pennellii HOM05D004064 ORTHO05D011910 5.3e-13 77.8 92 45.7
Sopen02g009320 Solanum pennellii HOM05D000017 ORTHO05D011910 1.2e-12 76.6 92 44.6
Nitab4.5_0000021g0530 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.6e-12 76.3 64 76.6
Sopen08g005960 Solanum pennellii HOM05D004064 ORTHO05D011910 1.6e-12 76.3 88 46.6
PGSC0003DMG400039926 Solanum tuberosum HOM05D004064 ORTHO05D011910 2.0e-12 75.9 87 47.1
PGSC0003DMG400031418 Solanum tuberosum HOM05D004064 ORTHO05D009561 3.5e-12 75.1 91 47.3
Sopen11g024710 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-12 74.3 88 46.6
Solyc07g042497.1 Solanum lycopersicum HOM05D004064 ORTHO05D011910 1.0e-11 73.6 92 44.6
Sopen05g002620 Solanum pennellii HOM05D000017 ORTHO05D011910 1.3e-11 73.2 92 44.6
Sopen05g016400 Solanum pennellii HOM05D000017 ORTHO05D011910 1.7e-11 72.8 92 43.5
Nitab4.5_0001547g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009561 2.2e-11 72.4 91 49.5
PGSC0003DMG400017950 Solanum tuberosum HOM05D004064 ORTHO05D009561 2.9e-11 72.0 101 43.6
PGSC0003DMG400025344 Solanum tuberosum HOM05D004064 ORTHO05D009561 3.8e-11 71.6 81 50.6
Sopen03g017620 Solanum pennellii HOM05D004064 ORTHO05D009561 1.5e-10 69.7 102 42.2
Sopen09g011110 Solanum pennellii HOM05D000017 ORTHO05D011910 1.5e-10 69.7 88 43.2
Sopen02g010180 Solanum pennellii HOM05D000017 ORTHO05D009909 1.9e-10 69.3 88 45.5
Sopen01g020720 Solanum pennellii HOM05D004064 ORTHO05D011910 4.2e-10 68.2 98 43.9
Sopen02g010790 Solanum pennellii HOM05D000017 ORTHO05D009561 5.5e-10 67.8 98 40.8
CAN.G83.8 Capsicum annuum HOM05D004064 ORTHO05D009561 9.4e-10 67.0 102 41.2
Sopen01g010980 Solanum pennellii HOM05D000017 ORTHO05D009561 1.2e-09 66.6 85 41.2
Sopen10g005830 Solanum pennellii HOM05D000017 ORTHO05D011910 1.2e-09 66.6 89 41.6
CAN.G391.3 Capsicum annuum HOM05D004064 ORTHO05D009561 1.6e-09 66.2 99 44.4
Nitab4.5_0000555g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.6e-09 66.2 52 67.3
Sopen01g018580 Solanum pennellii HOM05D004064 ORTHO05D009561 1.6e-09 66.2 98 39.8
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 1.6e-09 66.2 100 38.0
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-09 66.2 100 38.0
Sopen09g011090 Solanum pennellii HOM05D000017 ORTHO05D009561 1.6e-09 66.2 100 38.0
Sopen10g017570 Solanum pennellii HOM05D000017 ORTHO05D009561 1.6e-09 66.2 100 38.0
Sopen11g012650 Solanum pennellii HOM05D000017 ORTHO05D009561 1.6e-09 66.2 100 38.0
Sopen11g026090 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-09 66.2 100 38.0
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-09 66.2 100 38.0
Nitab4.5_0003496g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.7e-09 65.5 66 56.1
CAN.G1279.4 Capsicum annuum HOM05D004064 ORTHO05D009561 3.6e-09 65.1 102 41.2
Sopen01g016940 Solanum pennellii HOM05D004064 ORTHO05D009909 3.6e-09 65.1 90 42.2
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 8.0e-09 63.9 99 36.4
Peaxi162Scf00375g00430 Petunia axillaris HOM05D004064 ORTHO05D009561 1.0e-08 63.5 102 37.3
Sopen09g015990 Solanum pennellii HOM05D000017 ORTHO05D000013 1.8e-08 62.8 101 38.6
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 1.8e-08 62.8 102 37.3
PGSC0003DMG400004103 Solanum tuberosum HOM05D004064 ORTHO05D009561 1.8e-08 62.8 100 39.0
PGSC0003DMG400043277 Solanum tuberosum HOM05D004064 ORTHO05D009909 3.0e-08 62.0 67 47.8
Peaxi162Scf00031g02423 Petunia axillaris HOM05D000017 ORTHO05D009561 5.2e-08 61.2 100 38.0
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 5.2e-08 61.2 101 37.6
Sopen10g010720 Solanum pennellii HOM05D000017 ORTHO05D009561 5.2e-08 61.2 100 37.0
PGSC0003DMG400026053 Solanum tuberosum HOM05D004064 ORTHO05D009561 5.2e-08 61.2 85 41.2
Sopen11g010850 Solanum pennellii HOM05D000017 ORTHO05D009561 6.7e-08 60.8 99 40.4
PGSC0003DMG400034895 Solanum tuberosum HOM05D004064 ORTHO05D009561 6.7e-08 60.8 80 43.8
Nitab4.5_0008516g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009909 8.8e-08 60.5 69 56.5
Peaxi162Scf00007g00831 Petunia axillaris HOM05D006921 ORTHO05D009185 8.8e-08 60.5 84 36.9
Sopen10g011860 Solanum pennellii HOM05D004064 ORTHO05D009561 8.8e-08 60.5 101 37.6
Nitab4.5_0005436g0040 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.1e-07 60.1 84 42.9
Sopen12g028900 Solanum pennellii HOM05D037232 ORTHO05D009561 1.1e-07 60.1 96 38.5
Sopen03g028030 Solanum pennellii HOM05D000017 ORTHO05D009561 1.5e-07 59.7 100 34.0
Nitab4.5_0000535g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.0e-07 59.3 34 85.3
Peaxi162Scf00010g00072 Petunia axillaris HOM05D006921 ORTHO05D009185 2.0e-07 59.3 84 36.9
Peaxi162Scf00566g00021 Petunia axillaris HOM05D004064 ORTHO05D009561 2.0e-07 59.3 102 34.3
CAN.G630.48 Capsicum annuum HOM05D004064 ORTHO05D009561 3.3e-07 58.5 85 44.7
Nitab4.5_0001977g0080 Nicotiana tabacum HOM05D006921 ORTHO05D009185 3.3e-07 58.5 84 38.1
Nitab4.5_0005436g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 3.3e-07 58.5 84 38.1
PGSC0003DMG400004104 Solanum tuberosum HOM05D004064 ORTHO05D009561 4.4e-07 58.2 98 37.8
PGSC0003DMG400012698 Solanum tuberosum HOM05D004064 ORTHO05D009909 4.4e-07 58.2 74 45.9
Solyc10g054675.1 Solanum lycopersicum HOM05D004064 ORTHO05D011910 5.7e-07 57.8 79 40.5
Sopen03g014420 Solanum pennellii HOM05D004064 ORTHO05D011910 5.7e-07 57.8 72 44.4
PGSC0003DMG400035350 Solanum tuberosum HOM05D004064 ORTHO05D011910 5.7e-07 57.8 73 43.8
CAN.G362.17 Capsicum annuum HOM05D004064 ORTHO05D009561 7.5e-07 57.4 87 36.8
CAN.G53.40 Capsicum annuum HOM05D004064 ORTHO05D009561 7.5e-07 57.4 71 42.3
Peaxi162Scf00553g00217 Petunia axillaris HOM05D004064 ORTHO05D009561 7.5e-07 57.4 80 36.2
Nitab4.5_0001041g0110 Nicotiana tabacum HOM05D006921 ORTHO05D009185 9.7e-07 57.0 84 40.5
Sopen12g025840 Solanum pennellii HOM05D000014 ORTHO05D011910 9.7e-07 57.0 62 48.4
Nitab4.5_0005016g0010 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.7e-06 56.2 83 38.6
Peaxi162Scf00004g00458 Petunia axillaris HOM05D004064 ORTHO05D009561 1.7e-06 56.2 88 38.6
Peaxi162Scf00033g00082 Petunia axillaris HOM05D004064 ORTHO05D009561 1.7e-06 56.2 88 38.6
Sopen05g016460 Solanum pennellii HOM05D000004 ORTHO05D009561 2.8e-06 55.5 77 40.3
Nitab4.5_0004576g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 6.3e-06 54.3 83 41.0
Peaxi162Scf01238g00022 Petunia axillaris HOM05D004064 ORTHO05D009561 6.3e-06 54.3 87 35.6
Sopen01g011730 Solanum pennellii HOM05D004064 ORTHO05D009561 6.3e-06 54.3 99 37.4
Sopen05g014940 Solanum pennellii HOM05D004064 ORTHO05D009909 6.3e-06 54.3 61 45.9
Nitab4.5_0001507g0090 Nicotiana tabacum HOM05D004064 ORTHO05D009561 8.2e-06 53.9 85 43.5
Nitab4.5_0004688g0070 Nicotiana tabacum HOM05D006921 ORTHO05D009185 8.2e-06 53.9 80 41.2
Solyc12g035525.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 8.2e-06 53.9 84 40.5
PGSC0003DMG400038860 Solanum tuberosum HOM05D004064 ORTHO05D011910 8.2e-06 53.9 73 42.5


User provided reference genes

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