Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003187g0030 Nicotiana tabacum HOM05D006562 ORTHO05D008230 0.0e+00 1158.7 580 100.0
Nitab4.5_0001892g0110 Nicotiana tabacum HOM05D006562 ORTHO05D008230 7.9e-311 1069.7 596 91.3
Solyc02g083600.4 Solanum lycopersicum HOM05D006562 ORTHO05D008230 3.1e-275 951.4 598 80.8
Peaxi162Scf00328g00616 Petunia axillaris HOM05D006562 ORTHO05D008230 6.6e-265 917.1 621 77.3
Sopen02g028380 Solanum pennellii HOM05D006562 ORTHO05D008230 1.6e-263 912.5 598 78.3
CAN.G1274.29 Capsicum annuum HOM05D006562 ORTHO05D008230 1.3e-233 813.1 526 77.0
PGSC0003DMG400003647 Solanum tuberosum HOM05D006562 ORTHO05D008230 1.3e-233 813.1 500 81.0
Lj2A480G48 Lonicera japonica HOM05D006562 ORTHO05D008230 9.6e-200 700.7 601 61.1
Dinv33663 Davidia involucrata HOM05D006562 ORTHO05D008230 5.5e-195 684.9 612 60.0
vmacro22151 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 2.6e-189 666.0 611 57.8
vmacro22192 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 2.6e-189 666.0 611 57.9
CSS0025685 Camellia sinensis var. sinensis HOM05D006562 ORTHO05D008230 5.1e-185 651.7 595 58.2
Actinidia22955 Actinidia chinensis HOM05D006562 ORTHO05D008230 1.5e-184 650.2 611 55.6
Cc07_g11050 Coffea canephora HOM05D006562 ORTHO05D008230 2.2e-183 646.4 615 57.2
GSVIVG01018736001 Vitis vinifera HOM05D006562 ORTHO05D008230 3.8e-180 635.6 615 56.4
HanXRQChr15g0483891 Helianthus annuus HOM05D006562 ORTHO05D008230 2.5e-179 632.9 593 55.0
Cfa007000 Carpinus fangiana HOM05D006562 ORTHO05D008230 6.1e-178 628.2 610 54.3
Oeu048479.1 Olea europaea HOM05D006562 ORTHO05D008230 6.1e-178 628.2 615 54.8
CiPaw.07G060900 Carya illinoinensis HOM05D006562 ORTHO05D008230 8.8e-177 624.4 614 52.9
MD15G1242700 Malus domestica HOM05D006562 ORTHO05D008230 4.5e-173 612.1 604 53.1
TAR376G1060 Trochodendron aralioides HOM05D006562 ORTHO05D008230 5.0e-172 608.6 623 53.6
Migut.L00910 Erythranthe guttata HOM05D006562 ORTHO05D008230 6.5e-172 608.2 610 54.6
QL06p051072 Quercus lobata HOM05D006562 ORTHO05D008230 1.9e-171 606.7 619 53.8
SGA_v2.0_scaffold229G43296 Striga asiatica HOM05D006562 ORTHO05D008230 3.2e-171 605.9 673 50.2
Haze_03732 Corylus avellana HOM05D006562 ORTHO05D008230 5.5e-171 605.1 646 50.6
Sc16g0001970 Simmondsia chinensis HOM05D006562 ORTHO05D008230 4.7e-170 602.1 606 54.1
Atru.chr3.853 Acer truncatum HOM05D006562 ORTHO05D008230 6.1e-170 601.7 645 52.1
Lsat_1_v5_gn_3_72080 Lactuca sativa HOM05D006562 ORTHO05D008230 2.6e-168 596.3 606 53.1
SalBow5G1234 Salvia bowleyana HOM05D006562 ORTHO05D008230 4.1e-166 589.0 625 51.0
DCAR_014038 Daucus carota HOM05D006562 ORTHO05D008230 1.6e-165 587.0 514 57.8
CANSAT25G3480 Cannabis sativa HOM05D006562 ORTHO05D008230 1.5e-163 580.5 605 53.7
Thecc.01G014800 Theobroma cacao HOM05D006562 ORTHO05D008230 7.2e-163 578.2 607 51.6
RcHm_v2.0_Chr2g0099051 Rosa chinensis HOM05D006562 ORTHO05D008230 6.1e-162 575.1 615 51.4
Potri.005G111000 Populus trichocarpa HOM05D006562 ORTHO05D008230 2.6e-160 569.7 612 50.8
TWI53G1373 Tripterygium wilfordii HOM05D006562 ORTHO05D008230 1.3e-159 567.4 618 52.8
Lj4g0007150 Lotus japonicus HOM05D006562 ORTHO05D008230 2.8e-159 566.2 618 50.2
Manes.01G148500 Manihot esculenta HOM05D006562 ORTHO05D008230 1.4e-158 563.9 617 49.8
FvH4_1g11470 Fragaria vesca HOM05D006562 ORTHO05D008230 1.8e-158 563.5 603 50.7
FAN28G2818 Fragaria x ananassa HOM05D006562 ORTHO05D008230 1.8e-158 563.5 609 50.2
COL.COLO4_22460 Corchorus olitorius HOM05D006562 ORTHO05D008230 2.4e-158 563.1 605 50.4
Gohir.A10G098700 Gossypium hirsutum HOM05D006562 ORTHO05D008230 7.0e-158 561.6 602 51.0
FAN19G2077 Fragaria x ananassa HOM05D006562 ORTHO05D008230 2.0e-157 560.1 619 49.6
TPR.G19508 Trifolium pratense HOM05D006562 ORTHO05D008230 1.0e-156 557.8 618 49.5
Psat4g101960 Pisum sativum HOM05D006562 ORTHO05D008230 3.8e-156 555.8 612 49.0
Cpa.g.sc6.285 Carica papaya HOM05D006562 ORTHO05D008230 8.5e-156 554.7 632 49.1
FAN23G1005 Fragaria x ananassa HOM05D006562 ORTHO05D008230 1.9e-155 553.5 612 49.7
AUR62003339 Chenopodium quinoa HOM05D006562 ORTHO05D008230 2.5e-155 553.1 568 51.4
Gohir.D10G089300 Gossypium hirsutum HOM05D006562 ORTHO05D008230 3.2e-155 552.7 611 50.1
Medtr8g075250 Medicago truncatula HOM05D006562 ORTHO05D008230 9.4e-155 551.2 610 49.3
Gorai.011G098200 Gossypium raimondii HOM05D006562 ORTHO05D008230 2.7e-154 549.7 611 49.9
Sabra05G0091000 Salix brachista HOM05D006562 ORTHO05D008230 8.0e-154 548.1 624 48.4
Ca_03628_v3 Cicer arietinum L. HOM05D006562 ORTHO05D008230 1.8e-153 547.0 632 47.5
MBI05_g23389_MAGBIO Magnolia biondii HOM05D006562 ORTHO05D008230 8.8e-153 544.7 656 51.2
CsaV3_6G047340 Cucumis sativus L. HOM05D006562 ORTHO05D008230 3.7e-151 539.3 611 49.8
VMungo0251G0646 Vigna mungo HOM05D006562 ORTHO05D008230 2.4e-150 536.6 617 48.9
Glyma.16G124500 Glycine max HOM05D006562 ORTHO05D008230 3.1e-150 536.2 606 48.3
Sed0025600 Sechium edule HOM05D006562 ORTHO05D008230 7.0e-150 535.0 590 50.0
Eucgr.I02333 Eucalyptus grandis HOM05D006562 ORTHO05D008230 4.5e-149 532.3 603 49.9
MSTRG.15581 Avicennia marina HOM05D006562 ORTHO05D008230 7.7e-149 531.6 471 59.7
Phvul.003G265000 Phaseolus vulgaris HOM05D006562 ORTHO05D008230 1.3e-148 530.8 557 51.2
AUR62029498 Chenopodium quinoa HOM05D006562 ORTHO05D008230 5.0e-148 528.9 518 53.1
arahy.Tifrunner.gnm1.ann1.X2JQ1G Arachis hypogaea HOM05D006562 ORTHO05D008230 1.5e-147 527.3 611 49.4
arahy.Tifrunner.gnm1.ann1.6MN492 Arachis hypogaea HOM05D006562 ORTHO05D008230 1.9e-147 526.9 610 49.3
Ciclev10025220m.g Citrus clementina HOM05D006562 ORTHO05D008230 1.9e-147 526.9 612 48.9
EL10Ac6g15524 Beta vulgaris HOM05D006562 ORTHO05D008230 2.8e-146 523.1 669 44.4
Prupe.7G171500 Prunus persica HOM05D006562 ORTHO05D008230 2.8e-146 523.1 516 54.8
Rhsim10G0209300 Rhododendron simsii HOM05D006562 ORTHO05D008230 3.0e-145 519.6 625 48.2
ClCG01G020460 Citrullus lanatus HOM05D006562 ORTHO05D008230 1.7e-143 513.8 611 48.4
Aqoxy5G01815 Aquilegia oxysepala HOM05D006562 ORTHO05D008230 2.8e-143 513.1 589 48.4
Thhalv10003881m.g Eutrema salsugineum HOM05D006562 ORTHO05D008230 4.1e-142 509.2 595 48.9
Lalb_Chr16g0391391 Lupinus albus HOM05D006562 ORTHO05D008230 5.4e-142 508.8 613 46.3
unitig_37.g12438 Utricularia gibba HOM05D006562 ORTHO05D008230 9.2e-142 508.1 605 49.3
Duzib187G1447 Durio zibethinus HOM05D006562 ORTHO05D008230 2.3e-140 503.4 614 48.4
Ah.03g149120 Amaranthus hybridus HOM05D006562 ORTHO05D008230 3.9e-140 502.7 623 45.7
AL8G45460 Arabidopsis lyrata HOM05D006562 ORTHO05D008230 4.3e-139 499.2 601 48.6
Sp2g30560 Schrenkiella parvula HOM05D006562 ORTHO05D008230 1.6e-138 497.3 612 47.5
Carub.0008s2836 Capsella rubella HOM05D006562 ORTHO05D008230 8.0e-138 495.0 606 46.9
PGR119G1624 Punica granatum HOM05D006562 ORTHO05D008230 8.0e-138 495.0 605 46.4
Hund16502 Selenicereus undatus HOM05D006562 ORTHO05D008230 1.4e-137 494.2 422 57.6
AT5G66130 Arabidopsis thaliana HOM05D006562 ORTHO05D008230 2.0e-136 490.3 603 46.4
MELO3C007925.2 Cucumis melo HOM05D006562 ORTHO05D008230 5.8e-136 488.8 665 44.4
CARHR281620 Cardamine hirsuta HOM05D006562 ORTHO05D008230 6.0e-133 478.8 602 46.2
ECA246G3730 Erigeron canadensis HOM05D006562 ORTHO05D008230 8.0e-130 468.4 606 47.7
PSO700G0294 Papaver somniferum HOM05D006562 ORTHO05D008230 2.3e-129 466.8 627 45.0
Aa31LG1G14620 Aethionema arabicum HOM05D006562 ORTHO05D008230 8.9e-129 464.9 506 49.6
BraA09t36658Z Brassica rapa HOM05D006562 ORTHO05D008230 8.9e-129 464.9 599 44.9
PSO170G3776 Papaver somniferum HOM05D006562 ORTHO05D008230 1.2e-128 464.5 628 45.9
BcaC04g23114 Brassica carinata HOM05D006562 ORTHO05D008230 2.0e-128 463.8 547 47.5
C09p12020 Brassica napus HOM05D006562 ORTHO05D008230 1.1e-126 458.0 539 47.3
BcaB04g20123 Brassica carinata HOM05D006562 ORTHO05D008230 1.4e-126 457.6 605 45.0
BolC9t54092H Brassica oleracea HOM05D006562 ORTHO05D008230 3.5e-125 453.0 555 46.3
A09p10140 Brassica napus HOM05D006562 ORTHO05D008230 4.6e-125 452.6 512 49.6
Os03g0242100 Oryza sativa ssp. japonica HOM05D006562 ORTHO05D008230 1.3e-124 451.1 596 44.1
ATR0712G114 Amborella trichopoda HOM05D006562 ORTHO05D008230 3.6e-122 443.0 493 49.1
Zm00001eb398900 Zea mays HOM05D006562 ORTHO05D008230 2.3e-121 440.3 471 49.7
HPP92_022171 Vanilla planifolia HOM05D006562 ORTHO05D008230 1.4e-118 431.0 631 43.4
SHI08537 Sapria himalayana HOM05D006562 ORTHO05D008230 4.9e-111 406.0 399 53.1
HPP92_022170 Vanilla planifolia HOM05D006562 ORTHO05D008230 1.2e-88 331.6 448 44.9
SMO329G0081 Selaginella moellendorffii HOM05D006562 ORTHO05D008230 7.4e-83 312.4 483 37.7
Mapoly0004s0213 Marchantia polymorpha HOM05D006562 ORTHO05D008230 7.6e-80 302.4 590 34.7
Pp3c8_14180 Physcomitrium patens HOM05D006562 ORTHO05D008230 7.6e-80 302.4 467 38.8
CDE02G3565 Ceratophyllum demersum HOM05D006562 ORTHO05D008230 1.2e-77 295.0 516 35.9
Dinv33664 Davidia involucrata HOM05D006562 ORTHO05D008230 2.1e-69 267.7 292 51.7
Hma1.2p1_0315F.1_g122300 Hydrangea macrophylla HOM05D006562 ORTHO05D008230 3.0e-60 237.3 187 65.8
SEGI_24182 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 2.4e-57 227.6 317 40.7
FAN26G2549 Fragaria x ananassa HOM05D006562 ORTHO05D008230 1.0e-52 212.2 199 54.8
MCO01G428 Micromonas commoda HOM05D006562 ORTHO05D008230 1.2e-37 162.2 510 28.6
PRCOL_00000425 Prasinoderma coloniale HOM05D006562 ORTHO05D008230 1.2e-27 129.0 459 28.5
Cre03.g196600 Chlamydomonas reinhardtii HOM05D006562 ORTHO05D008230 1.8e-25 121.7 574 22.8
Lsat_1_v5_gn_5_17820 Lactuca sativa HOM05D002511 ORTHO05D019442 2.4e-25 121.3 122 50.0
CBR_g51010 Chara braunii HOM05D006562 ORTHO05D008230 9.2e-25 119.4 367 28.9
Sopen10g019740 Solanum pennellii HOM05D006562 ORTHO05D008230 5.0e-23 113.6 68 79.4
CAN.G1274.30 Capsicum annuum HOM05D006562 ORTHO05D008230 1.0e-20 105.9 72 83.3
SEGI_14672 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 6.2e-13 80.1 119 39.5
Actinidia17422 Actinidia chinensis HOM05D006562 ORTHO05D008230 9.8e-11 72.8 193 31.6
Lsat_1_v5_gn_5_12680 Lactuca sativa HOM05D004664 ORTHO05D005526 9.2e-09 66.2 70 52.9
Hund31353 Selenicereus undatus HOM05D006562 ORTHO05D008230 1.0e-07 62.8 125 36.0
Hund31354 Selenicereus undatus HOM05D006562 ORTHO05D008230 1.0e-07 62.8 125 36.0
Dinv40115 Davidia involucrata HOM05D006562 ORTHO05D008230 2.3e-07 61.6 72 54.2
Hund31048 Selenicereus undatus HOM05D006562 ORTHO05D008230 3.9e-07 60.8 123 35.8
Hund31049 Selenicereus undatus HOM05D006562 ORTHO05D008230 3.9e-07 60.8 123 35.8
MCO13G571 Micromonas commoda HOM05D001470 ORTHO05D006756 1.5e-06 58.9 244 23.4
Sc11g0002670 Simmondsia chinensis HOM05D004977 ORTHO05D006454 3.3e-06 57.8 386 22.0


User provided reference genes

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