Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003186g0010 Nicotiana tabacum HOM05D006940 ORTHO05D008626 4.6e-67 257.7 123 100.0
Nitab4.5_0000038g0040 Nicotiana tabacum HOM05D006940 ORTHO05D008626 5.1e-50 201.1 105 93.3
Solyc08g066610.3 Solanum lycopersicum HOM05D006940 ORTHO05D008626 1.4e-36 156.4 99 76.8
Sopen08g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 5.5e-36 154.5 101 76.2
Sopen09g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 2.7e-35 152.1 98 75.5
PGSC0003DMG400007740 Solanum tuberosum HOM05D006940 ORTHO05D008626 1.1e-33 146.7 99 72.7
Dinv28817 Davidia involucrata HOM05D006940 ORTHO05D008626 1.1e-31 140.2 105 64.8
CSS0001884 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 4.5e-30 134.8 113 60.2
TWI36G1176 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 2.2e-29 132.5 110 60.0
Atru.chr6.1604 Acer truncatum HOM05D006940 ORTHO05D008626 2.9e-29 132.1 114 60.5
Duzib133G0939 Durio zibethinus HOM05D006940 ORTHO05D008626 4.9e-29 131.3 108 62.0
Thecc.01G212400 Theobroma cacao HOM05D006940 ORTHO05D008626 3.2e-28 128.6 110 60.9
Psat0s1437g0080 Pisum sativum HOM05D006940 ORTHO05D008626 4.2e-28 128.3 99 63.6
Gorai.001G228900 Gossypium raimondii HOM05D006940 ORTHO05D008626 5.5e-28 127.9 109 61.5
Lalb_Chr21g0315011 Lupinus albus HOM05D006940 ORTHO05D008626 5.5e-28 127.9 107 55.1
Cpa.g.sc8.85 Carica papaya HOM05D006940 ORTHO05D008626 7.1e-28 127.5 103 64.1
Migut.D02467 Erythranthe guttata HOM05D006940 ORTHO05D008626 9.3e-28 127.1 96 63.5
Glyma.18G152800 Glycine max HOM05D006940 ORTHO05D008626 9.3e-28 127.1 100 62.0
Gohir.D07G166700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 9.3e-28 127.1 100 62.0
Oeu064661.1 Olea europaea HOM05D006940 ORTHO05D008626 1.2e-27 126.7 99 63.6
Gohir.A07G197033 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.6e-27 126.3 109 60.6
Gohir.D07G203400 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.6e-27 126.3 109 60.6
CSS0043498 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 2.1e-27 125.9 103 56.3
Manes.13G053500 Manihot esculenta HOM05D006940 ORTHO05D008626 2.1e-27 125.9 87 66.7
Gohir.A07G159700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 2.7e-27 125.6 108 59.3
Gorai.N003800 Gossypium raimondii HOM05D006940 ORTHO05D008626 2.7e-27 125.6 100 62.0
Hma1.2p1_0781F.1_g216880 Hydrangea macrophylla HOM05D006940 ORTHO05D008626 2.7e-27 125.6 57 91.2
Medtr7g052120 Medicago truncatula HOM05D006940 ORTHO05D008626 2.7e-27 125.6 101 58.4
Duzib138G0498 Durio zibethinus HOM05D006940 ORTHO05D008626 3.5e-27 125.2 106 59.4
Glyma.08G345100 Glycine max HOM05D006940 ORTHO05D008626 3.5e-27 125.2 110 58.2
Duzib211G0506 Durio zibethinus HOM05D006940 ORTHO05D008626 4.6e-27 124.8 111 57.7
Phvul.008G137700 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 4.6e-27 124.8 111 57.7
arahy.Tifrunner.gnm1.ann1.ZA5GY6 Arachis hypogaea HOM05D006940 ORTHO05D008626 6.0e-27 124.4 110 60.9
Gohir.A11G141800 Gossypium hirsutum HOM05D006940 ORTHO05D008626 6.0e-27 124.4 112 58.0
Prupe.8G192000 Prunus persica HOM05D006940 ORTHO05D008626 7.9e-27 124.0 109 57.8
Rhsim13G0052100 Rhododendron simsii HOM05D006940 ORTHO05D008626 7.9e-27 124.0 104 58.7
MD10G1153200 Malus domestica HOM05D006940 ORTHO05D008626 1.0e-26 123.6 102 57.8
MSTRG.20995 Avicennia marina HOM05D006940 ORTHO05D008626 1.3e-26 123.2 131 49.6
PSO017G0530 Papaver somniferum HOM05D006940 ORTHO05D008626 1.3e-26 123.2 110 53.6
QL09p045850 Quercus lobata HOM05D006940 ORTHO05D008626 1.3e-26 123.2 111 57.7
Lj1g0019270 Lotus japonicus HOM05D006940 ORTHO05D008626 2.3e-26 122.5 101 59.4
TAR365G0827 Trochodendron aralioides HOM05D006940 ORTHO05D008626 2.3e-26 122.5 105 53.3
CiPaw.14G043100 Carya illinoinensis HOM05D006940 ORTHO05D008626 3.0e-26 122.1 104 55.8
Potri.002G249901 Populus trichocarpa HOM05D006940 ORTHO05D008626 3.0e-26 122.1 111 59.5
TPR.G26809 Trifolium pratense HOM05D006940 ORTHO05D008626 3.0e-26 122.1 117 51.3
DCAR_012690 Daucus carota HOM05D000328 ORTHO05D008626 3.9e-26 121.7 58 82.8
RcHm_v2.0_Chr6g0283181 Rosa chinensis HOM05D006940 ORTHO05D008626 3.9e-26 121.7 113 59.3
vmacro02811 Vaccinium macrocarpon HOM05D006940 ORTHO05D008626 3.9e-26 121.7 58 84.5
Ciclev10033128m.g Citrus clementina HOM05D006940 ORTHO05D008626 5.1e-26 121.3 112 59.8
Lalb_Chr03g0041181 Lupinus albus HOM05D006940 ORTHO05D008626 5.1e-26 121.3 106 54.7
MELO3C021111.2 Cucumis melo HOM05D006940 ORTHO05D008626 6.7e-26 120.9 106 62.3
MD05G1163400 Malus domestica HOM05D006940 ORTHO05D008626 6.7e-26 120.9 108 56.5
TPR.G2024 Trifolium pratense HOM05D006940 ORTHO05D008626 6.7e-26 120.9 89 60.7
Gorai.007G158800 Gossypium raimondii HOM05D006940 ORTHO05D008626 8.7e-26 120.6 112 57.1
PGR044G1150 Punica granatum HOM05D006940 ORTHO05D008626 8.7e-26 120.6 100 61.0
TWI75G1309 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 8.7e-26 120.6 128 51.6
PSO675G0779 Papaver somniferum HOM05D006940 ORTHO05D008626 1.5e-25 119.8 114 50.9
Haze_03308 Corylus avellana HOM05D006940 ORTHO05D008626 1.9e-25 119.4 73 72.6
Gohir.D11G148100 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.9e-25 119.4 112 56.2
FvH4_2g17950 Fragaria vesca HOM05D006940 ORTHO05D008626 2.5e-25 119.0 114 59.6
FAN15G1530 Fragaria x ananassa HOM05D006940 ORTHO05D008626 2.5e-25 119.0 114 59.6
FAN24G1170 Fragaria x ananassa HOM05D006940 ORTHO05D008626 5.7e-25 117.9 114 57.9
FAN27G2163 Fragaria x ananassa HOM05D006940 ORTHO05D008626 5.7e-25 117.9 114 58.8
SalBow6G3514 Salvia bowleyana HOM05D006940 ORTHO05D008626 9.7e-25 117.1 101 61.4
CiPaw.13G054100 Carya illinoinensis HOM05D006940 ORTHO05D008626 1.3e-24 116.7 111 54.1
Manes.12G052500 Manihot esculenta HOM05D006940 ORTHO05D008626 1.3e-24 116.7 110 55.5
VMungo0331G0069 Vigna mungo HOM05D006940 ORTHO05D008626 1.6e-24 116.3 104 57.7
Sabra02G0190300 Salix brachista HOM05D006940 ORTHO05D008626 2.2e-24 115.9 104 57.7
Nn1g08072 Nelumbo nucifera HOM05D006940 ORTHO05D008626 2.8e-24 115.5 105 51.4
Sed0027137 Sechium edule HOM05D006940 ORTHO05D008626 2.8e-24 115.5 82 67.1
Nn7g37664 Nelumbo nucifera HOM05D006940 ORTHO05D008626 3.7e-24 115.2 59 79.7
MBI07_g41210_MAGBIO Magnolia biondii HOM05D006940 ORTHO05D008626 6.3e-24 114.4 58 79.3
MSTRG.18810 Avicennia marina HOM05D006940 ORTHO05D008626 8.2e-24 114.0 115 53.9
Sed0013755 Sechium edule HOM05D006940 ORTHO05D008626 8.2e-24 114.0 98 55.1
arahy.Tifrunner.gnm1.ann1.7YS827 Arachis hypogaea HOM05D006940 ORTHO05D008626 1.1e-23 113.6 105 59.0
CsaV3_7G026610 Cucumis sativus L. HOM05D006940 ORTHO05D008626 1.4e-23 113.2 59 79.7
Phvul.010G031000 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 1.4e-23 113.2 105 52.4
Psat0s4060g0200 Pisum sativum HOM05D006940 ORTHO05D008626 1.4e-23 113.2 110 51.8
SalBow7G1139 Salvia bowleyana HOM05D006940 ORTHO05D008626 1.4e-23 113.2 52 90.4
Eucgr.K02098 Eucalyptus grandis HOM05D006940 ORTHO05D008626 1.8e-23 112.8 113 55.8
Thhalv10026516m.g Eutrema salsugineum HOM05D006940 ORTHO05D008626 1.8e-23 112.8 52 90.4
COL.COLO4_06154 Corchorus olitorius HOM05D006940 ORTHO05D008626 4.1e-23 111.7 54 85.2
BcaB04g17733 Brassica carinata HOM05D006940 ORTHO05D008626 1.2e-22 110.2 51 90.2
A08p07220 Brassica napus HOM05D006940 ORTHO05D008626 1.2e-22 110.2 51 90.2
C08p08940 Brassica napus HOM05D006940 ORTHO05D008626 1.2e-22 110.2 51 90.2
BolC8t47738H Brassica oleracea HOM05D006940 ORTHO05D008626 1.2e-22 110.2 51 90.2
BraA08t32735Z Brassica rapa HOM05D006940 ORTHO05D008626 1.2e-22 110.2 51 90.2
CANSAT01G0416 Cannabis sativa HOM05D006940 ORTHO05D008626 1.2e-22 110.2 111 52.3
CANSAT01G0831 Cannabis sativa HOM05D006940 ORTHO05D008626 1.2e-22 110.2 111 52.3
CANSAT01G1056 Cannabis sativa HOM05D006940 ORTHO05D008626 1.2e-22 110.2 111 52.3
Sp7g09835 Schrenkiella parvula HOM05D006940 ORTHO05D008626 1.2e-22 110.2 51 90.2
Aa31sc38G90 Aethionema arabicum HOM05D006940 ORTHO05D008626 1.5e-22 109.8 97 58.8
AL9U11560 Arabidopsis lyrata HOM05D006940 ORTHO05D008626 2.0e-22 109.4 91 58.2
Carub.0007s2980 Capsella rubella HOM05D006940 ORTHO05D008626 2.6e-22 109.0 96 57.3
CARHR218280 Cardamine hirsuta HOM05D006940 ORTHO05D008626 2.6e-22 109.0 52 86.5
AT4G12970 Arabidopsis thaliana HOM05D006940 ORTHO05D008626 3.4e-22 108.6 50 90.0
MSTRG.12756 Avicennia marina HOM05D006940 ORTHO05D008626 7.6e-22 107.5 97 55.7
THA.LOC104818992 Tarenaya hassleriana HOM05D006940 ORTHO05D008626 1.3e-21 106.7 100 51.0
TAR636G0441 Trochodendron aralioides HOM05D006940 ORTHO05D008626 1.7e-21 106.3 57 73.7
Lsat_1_v5_gn_9_16040 Lactuca sativa HOM05D006940 ORTHO05D008626 2.9e-21 105.5 80 60.0
EL10Ac5g11605 Beta vulgaris HOM05D006940 ORTHO05D008626 6.5e-21 104.4 51 78.4
Lsat_1_v5_gn_8_97920 Lactuca sativa HOM05D006940 ORTHO05D008626 6.5e-21 104.4 52 80.8
HanXRQChr08g0231211 Helianthus annuus HOM05D006940 ORTHO05D008626 1.1e-20 103.6 50 84.0
Zm00001eb364920 Zea mays HOM05D006940 ORTHO05D008626 1.9e-20 102.8 55 72.7
Sc01g0005680 Simmondsia chinensis HOM05D006940 ORTHO05D008626 2.5e-20 102.4 51 82.4
Zm00001eb143570 Zea mays HOM05D006940 ORTHO05D008626 2.5e-20 102.4 53 75.5
Os01g0914400 Oryza sativa ssp. japonica HOM05D006940 ORTHO05D008626 3.2e-20 102.1 58 70.7
GSVIVG01031691001 Vitis vinifera HOM05D006940 ORTHO05D008626 5.5e-20 101.3 47 83.0
ATR0609G114 Amborella trichopoda HOM05D006940 ORTHO05D008626 2.7e-19 99.0 56 73.2
PGSC0003DMG400020111 Solanum tuberosum HOM05D006940 ORTHO05D008626 3.6e-19 98.6 99 58.6
HanXRQChr16g0507861 Helianthus annuus HOM05D006940 ORTHO05D008626 2.3e-18 95.9 50 78.0
AUR62042875 Chenopodium quinoa HOM05D006940 ORTHO05D008626 1.7e-16 89.7 96 46.9
SEGI_36325 Sequoiadendron giganteum HOM05D006940 ORTHO05D008626 1.7e-16 89.7 46 76.1
HPP92_011792 Vanilla planifolia HOM05D006940 ORTHO05D008626 3.7e-16 88.6 49 69.4
Zm00001eb174960 Zea mays HOM05D006940 ORTHO05D008626 9.1e-15 84.0 49 63.3
SMO351G0191 Selaginella moellendorffii HOM05D006940 ORTHO05D008626 3.4e-14 82.0 55 58.2


User provided reference genes

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