Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003182g0080 Nicotiana tabacum HOM05D008306 ORTHO05D004636 2.8e-67 258.5 127 100.0
Nitab4.5_0000685g0060 Nicotiana tabacum HOM05D008306 ORTHO05D004636 1.6e-19 99.8 70 68.6
Peaxi162Scf00170g00710 Petunia axillaris HOM05D005774 ORTHO05D006516 1.7e-16 89.7 100 41.0
Peaxi162Scf00422g00049 Petunia axillaris HOM05D005774 ORTHO05D006516 2.2e-16 89.4 109 41.3
Peaxi162Scf00100g00073 Petunia axillaris HOM05D008381 ORTHO05D004636 1.4e-15 86.7 105 41.0
Nitab4.5_0008516g0020 Nicotiana tabacum HOM05D008306 ORTHO05D004636 5.5e-15 84.7 110 38.2
Peaxi162Scf00577g00023 Petunia axillaris HOM05D008381 ORTHO05D004636 3.0e-13 79.0 86 40.7
Peaxi162Scf00464g00024 Petunia axillaris HOM05D008381 ORTHO05D004636 3.9e-13 78.6 74 50.0
Nitab4.5_0000197g0070 Nicotiana tabacum HOM05D008306 ORTHO05D004636 1.9e-12 76.3 86 41.9
Nitab4.5_0001055g0020 Nicotiana tabacum HOM05D008381 ORTHO05D004636 3.3e-12 75.5 117 37.6
Nitab4.5_0001319g0060 Nicotiana tabacum HOM05D011052 ORTHO05D004636 4.3e-12 75.1 121 35.5
Nitab4.5_0007164g0040 Nicotiana tabacum HOM05D014268 ORTHO05D014203 7.4e-12 74.3 85 43.5
Nitab4.5_0003252g0020 Nicotiana tabacum HOM05D008306 ORTHO05D004636 9.7e-12 73.9 88 43.2
Nitab4.5_0007929g0010 Nicotiana tabacum HOM05D008381 ORTHO05D004636 9.7e-12 73.9 87 42.5
Nitab4.5_0001119g0130 Nicotiana tabacum HOM05D008381 ORTHO05D004636 2.2e-11 72.8 104 34.6
Nitab4.5_0000433g0180 Nicotiana tabacum HOM05D008381 ORTHO05D004636 6.3e-11 71.2 108 37.0
Nitab4.5_0026829g0010 Nicotiana tabacum HOM05D008306 ORTHO05D004636 6.3e-11 71.2 73 46.6
Nitab4.5_0002972g0040 Nicotiana tabacum HOM05D012456 ORTHO05D004636 1.8e-10 69.7 122 35.2
Peaxi162Scf00019g01511 Petunia axillaris HOM05D008381 ORTHO05D004636 1.8e-10 69.7 98 35.7
Nitab4.5_0001627g0020 Nicotiana tabacum HOM05D011052 ORTHO05D004636 2.4e-10 69.3 104 36.5
Nitab4.5_0003210g0020 Nicotiana tabacum HOM05D008306 ORTHO05D004636 3.1e-10 68.9 117 30.8
Nitab4.5_0004988g0020 Nicotiana tabacum HOM05D008306 ORTHO05D004636 4.1e-10 68.6 109 33.0
Nitab4.5_0002946g0020 Nicotiana tabacum HOM05D011052 ORTHO05D004636 5.3e-10 68.2 93 39.8
Nitab4.5_0001115g0120 Nicotiana tabacum HOM05D012456 ORTHO05D000022 9.1e-10 67.4 122 36.1
Nitab4.5_0004734g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000022 9.1e-10 67.4 83 43.4
Peaxi162Scf00022g00105 Petunia axillaris HOM05D005774 ORTHO05D004636 9.1e-10 67.4 68 42.6
Nitab4.5_0002189g0010 Nicotiana tabacum HOM05D000067 ORTHO05D004636 1.2e-09 67.0 80 42.5
Nitab4.5_0004508g0020 Nicotiana tabacum HOM05D008306 ORTHO05D004636 1.5e-09 66.6 82 42.7
Nitab4.5_0001151g0080 Nicotiana tabacum HOM05D008381 ORTHO05D004636 3.4e-09 65.5 96 35.4
Nitab4.5_0005760g0010 Nicotiana tabacum HOM05D000003 ORTHO05D004636 5.9e-09 64.7 89 39.3
PGSC0003DMG400029540 Solanum tuberosum HOM05D008306 ORTHO05D004636 5.9e-09 64.7 110 36.4
EL10Ac6g13741 Beta vulgaris HOM05D008685 ORTHO05D000022 7.7e-09 64.3 92 34.8
CSS0047653 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 7.7e-09 64.3 94 35.1
Nitab4.5_0000411g0070 Nicotiana tabacum HOM05D000003 ORTHO05D004636 7.7e-09 64.3 81 42.0
Nitab4.5_0003763g0070 Nicotiana tabacum HOM05D008381 ORTHO05D004636 7.7e-09 64.3 98 34.7
Peaxi162Scf00842g00432 Petunia axillaris HOM05D005774 ORTHO05D006516 7.7e-09 64.3 68 44.1
CAN.G819.9 Capsicum annuum HOM05D011052 ORTHO05D004636 1.0e-08 63.9 95 40.0
Nitab4.5_0002177g0030 Nicotiana tabacum HOM05D008306 ORTHO05D004636 1.7e-08 63.2 76 42.1
Solyc05g039970.1 Solanum lycopersicum HOM05D008381 ORTHO05D004636 2.2e-08 62.8 93 35.5
Actinidia24692 Actinidia chinensis HOM05D000155 ORTHO05D000022 2.9e-08 62.4 83 36.1
Actinidia31833 Actinidia chinensis HOM05D000155 ORTHO05D000022 2.9e-08 62.4 91 31.9
CSS0009143 Camellia sinensis var. sinensis HOM05D000155 ORTHO05D000022 2.9e-08 62.4 83 39.8
COL.COLO4_07368 Corchorus olitorius HOM05D000003 ORTHO05D000022 2.9e-08 62.4 92 35.9
Nitab4.5_0000801g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.9e-08 62.4 78 39.7
Prupe.4G223300 Prunus persica HOM05D000279 ORTHO05D000022 2.9e-08 62.4 87 37.9
RcHm_v2.0_Chr5g0074971 Rosa chinensis HOM05D000003 ORTHO05D000022 2.9e-08 62.4 98 36.7
SHI25431 Sapria himalayana HOM05D000024 ORTHO05D000022 2.9e-08 62.4 116 31.9
EL10As2g23251 Beta vulgaris HOM05D007742 ORTHO05D004072 5.0e-08 61.6 112 33.9
CAN.G681.24 Capsicum annuum HOM05D000016 ORTHO05D000109 5.0e-08 61.6 69 44.9
COL.COLO4_12315 Corchorus olitorius HOM05D000003 ORTHO05D000022 5.0e-08 61.6 88 33.0
FvH4_3g23482 Fragaria vesca HOM05D000279 ORTHO05D000022 6.5e-08 61.2 88 37.5
Peaxi162Scf00750g00049 Petunia axillaris HOM05D005774 ORTHO05D006516 6.5e-08 61.2 76 36.8
PGSC0003DMG400033083 Solanum tuberosum HOM05D000003 ORTHO05D000022 6.5e-08 61.2 81 40.7
COL.COLO4_15333 Corchorus olitorius HOM05D064659 ORTHO05D000022 8.5e-08 60.8 85 36.5
Nitab4.5_0001319g0020 Nicotiana tabacum HOM05D008381 ORTHO05D004636 8.5e-08 60.8 88 39.8
Prupe.3G063400 Prunus persica HOM05D000003 ORTHO05D000167 8.5e-08 60.8 85 41.2
EL10Ac2g03336 Beta vulgaris HOM05D014031 ORTHO05D000022 1.1e-07 60.5 79 39.2
COL.COLO4_27635 Corchorus olitorius HOM05D000003 ORTHO05D000022 1.1e-07 60.5 88 34.1
Nitab4.5_0010938g0010 Nicotiana tabacum HOM05D010747 ORTHO05D004636 1.1e-07 60.5 58 46.6
SHI17669 Sapria himalayana HOM05D004990 ORTHO05D000022 1.1e-07 60.5 105 34.3
MD11G1210000 Malus domestica HOM05D000279 ORTHO05D000498 1.4e-07 60.1 92 37.0
Actinidia31778 Actinidia chinensis HOM05D000155 ORTHO05D000022 1.9e-07 59.7 92 32.6
CSS0026168 Camellia sinensis var. sinensis HOM05D000155 ORTHO05D000022 1.9e-07 59.7 107 29.0
CAN.G459.19 Capsicum annuum HOM05D000010 ORTHO05D000063 1.9e-07 59.7 109 30.3
AUR62020106 Chenopodium quinoa HOM05D008685 ORTHO05D000022 1.9e-07 59.7 80 41.2
MBI16_g11026_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.9e-07 59.7 91 33.0
MBI16_g11674_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.9e-07 59.7 91 34.1
Nitab4.5_0005874g0020 Nicotiana tabacum HOM05D008381 ORTHO05D004636 1.9e-07 59.7 61 42.6
Sopen01g005170 Solanum pennellii HOM05D000155 ORTHO05D000022 1.9e-07 59.7 93 34.4
Sopen02g028750 Solanum pennellii HOM05D000155 ORTHO05D000022 1.9e-07 59.7 93 34.4
EL10Ac2g04336 Beta vulgaris HOM05D008685 ORTHO05D000022 2.5e-07 59.3 87 36.8
QL03p010769 Quercus lobata HOM05D000155 ORTHO05D000022 2.5e-07 59.3 116 27.6
CAN.G1088.1 Capsicum annuum HOM05D000024 ORTHO05D000006 3.2e-07 58.9 104 29.8
Nitab4.5_0000297g0200 Nicotiana tabacum HOM05D008381 ORTHO05D004636 3.2e-07 58.9 70 38.6
RcHm_v2.0_Chr2g0128961 Rosa chinensis HOM05D000003 ORTHO05D000022 3.2e-07 58.9 93 38.7
SHI49575 Sapria himalayana HOM05D000024 ORTHO05D000022 4.2e-07 58.5 99 30.3
RcHm_v2.0_Chr5g0041361 Rosa chinensis HOM05D000279 ORTHO05D000022 5.5e-07 58.2 88 37.5
SHI19424 Sapria himalayana HOM05D004990 ORTHO05D000022 5.5e-07 58.2 88 36.4
SHI45359 Sapria himalayana HOM05D004990 ORTHO05D000022 5.5e-07 58.2 87 34.5
Aqoxy6G02148 Aquilegia oxysepala HOM05D000155 ORTHO05D000022 7.2e-07 57.8 83 34.9
EL10Ac2g03536 Beta vulgaris HOM05D014031 ORTHO05D000022 7.2e-07 57.8 79 35.4
AUR62013403 Chenopodium quinoa HOM05D008685 ORTHO05D000022 9.4e-07 57.4 90 38.9
AUR62034246 Chenopodium quinoa HOM05D019958 ORTHO05D000022 9.4e-07 57.4 109 31.2
Nitab4.5_0006816g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000022 9.4e-07 57.4 78 42.3
SHI45735 Sapria himalayana HOM05D000024 ORTHO05D000022 9.4e-07 57.4 87 34.5
PGSC0003DMG400014015 Solanum tuberosum HOM05D008381 ORTHO05D004636 9.4e-07 57.4 65 40.0
Nitab4.5_0004123g0040 Nicotiana tabacum HOM05D008306 ORTHO05D004636 1.6e-06 56.6 101 31.7
Os06g0683500 Oryza sativa ssp. japonica HOM05D000155 ORTHO05D000022 1.6e-06 56.6 85 35.3
Peaxi162Scf00039g00811 Petunia axillaris HOM05D005774 ORTHO05D006516 2.1e-06 56.2 79 34.2
Prupe.1G291700 Prunus persica HOM05D000061 ORTHO05D000050 2.1e-06 56.2 91 34.1
QL01p018268 Quercus lobata HOM05D000155 ORTHO05D000022 2.1e-06 56.2 88 34.1
SHI19694 Sapria himalayana HOM05D000024 ORTHO05D000006 2.1e-06 56.2 86 32.6
VMungo0647G1401 Vigna mungo HOM05D000155 ORTHO05D000022 2.1e-06 56.2 116 27.6
ATR0626G376 Amborella trichopoda HOM05D004588 ORTHO05D005365 2.7e-06 55.8 87 31.0
CiPaw.04G137600 Carya illinoinensis HOM05D000155 ORTHO05D000022 2.7e-06 55.8 85 36.5
COL.COLO4_13287 Corchorus olitorius HOM05D000003 ORTHO05D000126 2.7e-06 55.8 83 37.3
COL.COLO4_35386 Corchorus olitorius HOM05D008133 ORTHO05D009449 2.7e-06 55.8 87 29.9
FvH4_3g23491 Fragaria vesca HOM05D000279 ORTHO05D000957 2.7e-06 55.8 87 37.9
Nitab4.5_0006847g0010 Nicotiana tabacum HOM05D008381 ORTHO05D004636 2.7e-06 55.8 72 44.4
PSO566G0030 Papaver somniferum HOM05D000155 ORTHO05D000022 2.7e-06 55.8 87 35.6
Sabra17G0024800 Salix brachista HOM05D000003 ORTHO05D000022 2.7e-06 55.8 90 34.4
SHI06312 Sapria himalayana HOM05D000024 ORTHO05D000007 2.7e-06 55.8 111 32.4
CANSAT78G2307 Cannabis sativa HOM05D000003 ORTHO05D000167 3.6e-06 55.5 97 34.0
Rhsim13G0169200 Rhododendron simsii HOM05D000155 ORTHO05D000022 3.6e-06 55.5 87 29.9
SHI28582 Sapria himalayana HOM05D000024 ORTHO05D000022 3.6e-06 55.5 91 34.1
Sopen07g021380 Solanum pennellii HOM05D000155 ORTHO05D000034 3.6e-06 55.5 88 31.8
VMungo0647G2109 Vigna mungo HOM05D000155 ORTHO05D000022 3.6e-06 55.5 85 28.2
FvH4_3g33091 Fragaria vesca HOM05D000003 ORTHO05D000022 4.7e-06 55.1 87 32.2
Nitab4.5_0004031g0010 Nicotiana tabacum HOM05D008381 ORTHO05D004636 4.7e-06 55.1 85 41.2
Nitab4.5_0006077g0040 Nicotiana tabacum HOM05D008306 ORTHO05D004636 4.7e-06 55.1 49 51.0
QL04p008062 Quercus lobata HOM05D000009 ORTHO05D000008 4.7e-06 55.1 88 30.7
CiPaw.03G110900 Carya illinoinensis HOM05D000155 ORTHO05D000022 6.1e-06 54.7 115 31.3
COL.COLO4_06385 Corchorus olitorius HOM05D000395 ORTHO05D009449 6.1e-06 54.7 79 35.4
COL.COLO4_17181 Corchorus olitorius HOM05D008183 ORTHO05D007254 6.1e-06 54.7 89 30.3
LjContig00141g0020455 Lotus japonicus HOM05D000003 ORTHO05D000022 6.1e-06 54.7 94 34.0
Nitab4.5_0000296g0070 Nicotiana tabacum HOM05D008306 ORTHO05D004636 6.1e-06 54.7 56 44.6
Nitab4.5_0002854g0080 Nicotiana tabacum HOM05D001426 ORTHO05D001389 6.1e-06 54.7 90 35.6
Nitab4.5_0004274g0020 Nicotiana tabacum HOM05D009389 ORTHO05D004636 6.1e-06 54.7 58 48.3
RcHm_v2.0_Chr5g0041481 Rosa chinensis HOM05D000279 ORTHO05D000498 6.1e-06 54.7 93 36.6
SHI15769 Sapria himalayana HOM05D004990 ORTHO05D000022 6.1e-06 54.7 86 32.6
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 6.1e-06 54.7 89 33.7
FvH4_3g29171 Fragaria vesca HOM05D009383 ORTHO05D011656 7.9e-06 54.3 88 33.0
FAN25G0424 Fragaria x ananassa HOM05D008833 ORTHO05D010662 7.9e-06 54.3 79 36.7
MBI18_g23708_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.9e-06 54.3 90 30.0
Nitab4.5_0001962g0120 Nicotiana tabacum HOM05D000003 ORTHO05D000022 7.9e-06 54.3 94 34.0
RcHm_v2.0_Chr3g0486471 Rosa chinensis HOM05D000003 ORTHO05D000022 7.9e-06 54.3 103 35.0
Sabra17G0024900 Salix brachista HOM05D000003 ORTHO05D000022 7.9e-06 54.3 90 33.3


User provided reference genes

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