Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003180g0040 Nicotiana tabacum HOM05D007485 ORTHO05D009437 1.0e-85 320.1 165 100.0
Nitab4.5_0001740g0030 Nicotiana tabacum HOM05D007485 ORTHO05D009437 5.4e-39 164.9 136 68.4
CAN.G322.118 Capsicum annuum HOM05D007485 ORTHO05D009437 7.6e-25 117.9 136 54.4
Solyc06g007990.4 Solanum lycopersicum HOM05D007485 ORTHO05D009437 5.3e-18 95.1 136 48.5
Sopen06g002830 Solanum pennellii HOM05D007485 ORTHO05D009437 1.5e-17 93.6 136 49.3
Peaxi162Scf00499g00019 Petunia axillaris HOM05D007485 ORTHO05D009437 1.7e-16 90.1 141 46.8
CSS0034782 Camellia sinensis var. sinensis HOM05D007485 ORTHO05D009437 1.4e-15 87.0 141 42.6
vmacro02738 Vaccinium macrocarpon HOM05D007485 ORTHO05D009437 6.0e-14 81.6 156 43.6
Atru.chr5.1880 Acer truncatum HOM05D007485 ORTHO05D009437 2.3e-13 79.7 146 41.8
MSTRG.18375 Avicennia marina HOM05D007485 ORTHO05D009437 6.7e-13 78.2 120 39.2
MD05G1180900 Malus domestica HOM05D007485 ORTHO05D009437 1.5e-12 77.0 146 35.6
Prupe.8G207500 Prunus persica HOM05D007485 ORTHO05D009437 1.5e-12 77.0 141 37.6
MD10G1169600 Malus domestica HOM05D007485 ORTHO05D009437 2.5e-12 76.3 146 37.7
CiPaw.03G152400 Carya illinoinensis HOM05D007485 ORTHO05D009437 4.3e-12 75.5 139 38.8
Rhsim13G0042600 Rhododendron simsii HOM05D007485 ORTHO05D009437 7.4e-12 74.7 145 40.0
QL09p044412 Quercus lobata HOM05D007485 ORTHO05D009437 1.3e-11 73.9 136 36.0
Haze_24766 Corylus avellana HOM05D007485 ORTHO05D009437 1.6e-11 73.6 136 37.5
RcHm_v2.0_Chr6g0285341 Rosa chinensis HOM05D007485 ORTHO05D009437 3.7e-11 72.4 137 42.3
Migut.D00513 Erythranthe guttata HOM05D007485 ORTHO05D009437 8.1e-11 71.2 120 39.2
Thecc.01G230100 Theobroma cacao HOM05D007485 ORTHO05D009437 1.1e-10 70.9 136 39.0
Cc01_g17350 Coffea canephora HOM05D007485 ORTHO05D009437 2.4e-10 69.7 148 35.8
SalBow6G3754 Salvia bowleyana HOM05D007485 ORTHO05D009437 2.4e-10 69.7 137 39.4
Gorai.001G234600 Gossypium raimondii HOM05D007485 ORTHO05D009437 1.2e-09 67.4 141 34.0
COL.COLO4_36853 Corchorus olitorius HOM05D007485 ORTHO05D009437 1.5e-09 67.0 136 37.5
Cfa002536 Carpinus fangiana HOM05D001836 ORTHO05D001519 2.0e-09 66.6 136 35.3
Gohir.A07G201700 Gossypium hirsutum HOM05D007485 ORTHO05D009437 2.0e-09 66.6 136 34.6
Gohir.D07G208000 Gossypium hirsutum HOM05D007485 ORTHO05D009437 2.0e-09 66.6 141 33.3
TWI59G0176 Tripterygium wilfordii HOM05D007485 ORTHO05D009437 2.0e-09 66.6 141 37.6
SGA_v2.0_scaffold1G00709 Striga asiatica HOM05D007485 ORTHO05D009437 5.8e-09 65.1 113 35.4
Psat0s3317g0040 Pisum sativum HOM05D007485 ORTHO05D009437 2.2e-08 63.2 127 40.2
Lj1g0002217 Lotus japonicus HOM05D007485 ORTHO05D009437 2.9e-08 62.8 139 36.7
Lalb_Chr19g0125461 Lupinus albus HOM05D007485 ORTHO05D009437 4.9e-08 62.0 136 39.0
Actinidia37576 Actinidia chinensis HOM05D007485 ORTHO05D009437 8.4e-08 61.2 139 42.4
Medtr7g059255 Medicago truncatula HOM05D007485 ORTHO05D009437 8.4e-08 61.2 99 45.5
Duzib133G1001 Durio zibethinus HOM05D007485 ORTHO05D009437 1.1e-07 60.8 136 33.1
FvH4_2g19580 Fragaria vesca HOM05D007485 ORTHO05D009437 1.1e-07 60.8 136 38.2
FAN24G1628 Fragaria x ananassa HOM05D007485 ORTHO05D009437 1.1e-07 60.8 136 38.2
Glyma.18G175800 Glycine max HOM05D007485 ORTHO05D009437 1.4e-07 60.5 100 42.0
Sed0027911 Sechium edule HOM05D007485 ORTHO05D009437 1.4e-07 60.5 124 33.1
VMungo1383G3371 Vigna mungo HOM05D007485 ORTHO05D009437 1.4e-07 60.5 100 44.0
CANSAT01G1289 Cannabis sativa HOM05D007485 ORTHO05D009437 1.9e-07 60.1 121 36.4
Potri.002G251800 Populus trichocarpa HOM05D007485 ORTHO05D009437 2.5e-07 59.7 99 40.4
PGR083G2217 Punica granatum HOM05D007485 ORTHO05D009437 5.5e-07 58.5 144 36.8
Phvul.008G122300 Phaseolus vulgaris HOM05D007485 ORTHO05D009437 7.1e-07 58.2 100 43.0
Manes.12G043200 Manihot esculenta HOM05D007485 ORTHO05D009437 9.3e-07 57.8 137 37.2
arahy.Tifrunner.gnm1.ann1.9XF3L6 Arachis hypogaea HOM05D007485 ORTHO05D009437 1.2e-06 57.4 146 32.2
arahy.Tifrunner.gnm1.ann1.W4TMFE Arachis hypogaea HOM05D007485 ORTHO05D009437 1.2e-06 57.4 157 32.5
Ciclev10022604m.g Citrus clementina HOM05D007485 ORTHO05D009437 2.1e-06 56.6 102 38.2
ClCG07G001710 Citrullus lanatus HOM05D007485 ORTHO05D009437 2.7e-06 56.2 133 36.1
CsaV3_3G028690 Cucumis sativus L. HOM05D007485 ORTHO05D009437 2.7e-06 56.2 142 35.9
Sp7g10710 Schrenkiella parvula HOM05D007485 ORTHO05D009437 2.7e-06 56.2 139 30.9
AT4G13220 Arabidopsis thaliana HOM05D007485 ORTHO05D009437 4.6e-06 55.5 112 34.8
Glyma.08G357300 Glycine max HOM05D007485 ORTHO05D009437 4.6e-06 55.5 136 35.3
MELO3C012792.2 Cucumis melo HOM05D007485 ORTHO05D009437 6.0e-06 55.1 142 36.6
FAN27G2610 Fragaria x ananassa HOM05D007485 ORTHO05D009437 6.0e-06 55.1 146 34.9


User provided reference genes

Program Settings