Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003178g0080 Nicotiana tabacum HOM05D007043 ORTHO05D008951 5.5e-99 364.4 196 100.0
Peaxi162Scf00360g00918 Petunia axillaris HOM05D007043 ORTHO05D008951 4.1e-86 321.6 198 84.3
CAN.G1183.21 Capsicum annuum HOM05D007043 ORTHO05D008951 1.6e-82 309.7 207 79.7
Solyc04g072039.1 Solanum lycopersicum HOM05D007043 ORTHO05D008951 6.1e-82 307.8 203 79.3
Sopen04g028120 Solanum pennellii HOM05D007043 ORTHO05D008951 4.0e-81 305.1 203 79.3
Nitab4.5_0003443g0050 Nicotiana tabacum HOM05D007043 ORTHO05D008951 3.7e-79 298.5 157 95.5
PGSC0003DMG400025055 Solanum tuberosum HOM05D007043 ORTHO05D008951 6.4e-79 297.7 205 76.6
Cc10_g06450 Coffea canephora HOM05D007043 ORTHO05D008951 4.3e-75 285.0 199 74.9
TAR625G0503 Trochodendron aralioides HOM05D007043 ORTHO05D008951 1.6e-74 283.1 192 73.4
Migut.N02945 Erythranthe guttata HOM05D007043 ORTHO05D008951 5.2e-73 278.1 193 73.1
Potri.005G198400 Populus trichocarpa HOM05D007043 ORTHO05D008951 5.2e-73 278.1 193 72.0
Aqoxy5G02008 Aquilegia oxysepala HOM05D007043 ORTHO05D008951 8.9e-73 277.3 192 71.4
SalBow6G0078 Salvia bowleyana HOM05D007043 ORTHO05D008951 3.4e-72 275.4 193 72.0
unitig_52.g17176 Utricularia gibba HOM05D007043 ORTHO05D008951 3.4e-72 275.4 190 71.6
ClCG08G007230 Citrullus lanatus HOM05D007043 ORTHO05D008951 9.8e-72 273.9 192 71.9
Hma1.2p1_0678F.1_g202140 Hydrangea macrophylla HOM05D007043 ORTHO05D008951 1.3e-71 273.5 195 72.3
PSO170G2334 Papaver somniferum HOM05D007043 ORTHO05D008951 2.9e-71 272.3 196 69.4
Glyma.20G171100 Glycine max HOM05D007043 ORTHO05D008951 6.4e-71 271.2 192 71.4
VMungo0720G3009 Vigna mungo HOM05D007043 ORTHO05D008951 1.1e-70 270.4 196 67.9
CsaV3_6G004900 Cucumis sativus L. HOM05D007043 ORTHO05D008951 3.2e-70 268.9 192 70.3
MELO3C019966.2 Cucumis melo HOM05D007043 ORTHO05D008951 9.2e-70 267.3 192 69.8
CSS0028309 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 1.2e-69 266.9 195 72.8
CiPaw.15G011600 Carya illinoinensis HOM05D007043 ORTHO05D008951 1.2e-69 266.9 193 70.5
Glyma.10G220400 Glycine max HOM05D007043 ORTHO05D008951 1.2e-69 266.9 192 69.8
Gohir.A06G112300 Gossypium hirsutum HOM05D007043 ORTHO05D008951 1.6e-69 266.5 196 66.3
PSO210G5925 Papaver somniferum HOM05D007043 ORTHO05D008951 2.1e-69 266.2 196 67.9
CSS0014664 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 3.5e-69 265.4 195 72.3
Ciclev10002599m.g Citrus clementina HOM05D007043 ORTHO05D008951 4.6e-69 265.0 193 69.9
Atru.chr13.1985 Acer truncatum HOM05D007043 ORTHO05D008951 6.0e-69 264.6 197 69.0
Phvul.007G084700 Phaseolus vulgaris HOM05D007043 ORTHO05D008951 6.0e-69 264.6 192 66.7
QL02p036540 Quercus lobata HOM05D007043 ORTHO05D008951 6.0e-69 264.6 202 67.3
Cfa018265 Carpinus fangiana HOM05D007043 ORTHO05D008951 7.8e-69 264.2 198 68.7
QL02p037061 Quercus lobata HOM05D007043 ORTHO05D008951 7.8e-69 264.2 201 67.7
AUR62034911 Chenopodium quinoa HOM05D007043 ORTHO05D008951 1.0e-68 263.8 192 68.8
Sed0011039 Sechium edule HOM05D007043 ORTHO05D008951 1.0e-68 263.8 191 68.1
GSVIVG01013701001 Vitis vinifera HOM05D007043 ORTHO05D008951 1.3e-68 263.5 192 68.2
Psat6g189600 Pisum sativum HOM05D007043 ORTHO05D008951 1.7e-68 263.1 192 68.8
TWI60G1299 Tripterygium wilfordii HOM05D007043 ORTHO05D008951 2.3e-68 262.7 194 68.6
Medtr1g097460 Medicago truncatula HOM05D007043 ORTHO05D008951 3.0e-68 262.3 192 68.2
Haze_17823 Corylus avellana HOM05D007043 ORTHO05D008951 3.9e-68 261.9 193 69.4
arahy.Tifrunner.gnm1.ann1.T4LNKK Arachis hypogaea HOM05D007043 ORTHO05D008951 5.0e-68 261.5 192 68.8
BraA07t31355Z Brassica rapa HOM05D007043 ORTHO05D008951 8.6e-68 260.8 192 67.7
Eucgr.F02676 Eucalyptus grandis HOM05D007043 ORTHO05D008951 1.1e-67 260.4 196 66.8
FAN15G1248 Fragaria x ananassa HOM05D007043 ORTHO05D008951 1.5e-67 260.0 191 67.0
FAN20G1550 Fragaria x ananassa HOM05D007043 ORTHO05D008951 1.5e-67 260.0 191 67.0
Prupe.8G043500 Prunus persica HOM05D007043 ORTHO05D008951 1.5e-67 260.0 193 65.8
arahy.Tifrunner.gnm1.ann1.7K1R9Z Arachis hypogaea HOM05D007043 ORTHO05D008951 1.9e-67 259.6 192 68.8
FAN24G2827 Fragaria x ananassa HOM05D007043 ORTHO05D008951 1.9e-67 259.6 191 67.0
RcHm_v2.0_Chr6g0273931 Rosa chinensis HOM05D007043 ORTHO05D008951 1.9e-67 259.6 191 67.5
vmacro21135 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.9e-67 259.6 197 70.1
vmacro22650 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.9e-67 259.6 197 70.1
ATR1120G076 Amborella trichopoda HOM05D007043 ORTHO05D008951 2.5e-67 259.2 192 66.1
SGA_v2.0_scaffold364G49970 Striga asiatica HOM05D007043 ORTHO05D008951 2.5e-67 259.2 186 71.0
Thecc.08G163200 Theobroma cacao HOM05D007043 ORTHO05D008951 2.5e-67 259.2 193 68.4
Duzib093G0431 Durio zibethinus HOM05D007043 ORTHO05D008951 4.3e-67 258.5 193 68.4
CDE05G0687 Ceratophyllum demersum HOM05D007043 ORTHO05D008951 5.6e-67 258.1 192 65.1
Lj5g0012506 Lotus japonicus HOM05D007043 ORTHO05D008951 5.6e-67 258.1 192 67.7
Cpa.g.sc26.119 Carica papaya HOM05D007043 ORTHO05D008951 7.3e-67 257.7 193 66.3
vmacro21134 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 9.5e-67 257.3 215 66.0
Gohir.D06G116500 Gossypium hirsutum HOM05D007043 ORTHO05D008951 1.2e-66 256.9 196 63.8
Gorai.010G134300 Gossypium raimondii HOM05D007043 ORTHO05D008951 1.2e-66 256.9 196 63.8
Carub.0002s1851 Capsella rubella HOM05D007043 ORTHO05D008951 1.6e-66 256.5 190 66.8
ECA232G2240 Erigeron canadensis HOM05D007043 ORTHO05D008951 3.6e-66 255.4 192 63.5
Aa31LG4G8890 Aethionema arabicum HOM05D007043 ORTHO05D008951 4.7e-66 255.0 193 66.3
AL2G31320 Arabidopsis lyrata HOM05D007043 ORTHO05D008951 4.7e-66 255.0 189 67.2
A07p37900 Brassica napus HOM05D007043 ORTHO05D008951 4.7e-66 255.0 191 66.5
BolC6t39632H Brassica oleracea HOM05D007043 ORTHO05D008951 4.7e-66 255.0 196 64.8
HPP92_024076 Vanilla planifolia HOM05D007043 ORTHO05D008951 4.7e-66 255.0 191 67.5
BcaC08g46601 Brassica carinata HOM05D007043 ORTHO05D008951 6.2e-66 254.6 191 66.5
C06p45800 Brassica napus HOM05D007043 ORTHO05D008951 6.2e-66 254.6 191 66.5
Thhalv10019190m.g Eutrema salsugineum HOM05D007043 ORTHO05D008951 1.4e-65 253.4 189 67.7
AUR62026618 Chenopodium quinoa HOM05D007043 ORTHO05D008951 2.3e-65 252.7 190 68.4
Lalb_Chr02g0141621 Lupinus albus HOM05D007043 ORTHO05D008951 3.1e-65 252.3 190 66.8
MD10G1037900 Malus domestica HOM05D007043 ORTHO05D008951 3.1e-65 252.3 195 64.6
Hund26674 Selenicereus undatus HOM05D007043 ORTHO05D008951 4.0e-65 251.9 190 65.8
Ah.05g168310 Amaranthus hybridus HOM05D007043 ORTHO05D008951 5.2e-65 251.5 194 67.5
MD05G1035600 Malus domestica HOM05D007043 ORTHO05D008951 6.8e-65 251.1 195 65.1
HanXRQChr11g0320161 Helianthus annuus HOM05D007043 ORTHO05D008951 8.9e-65 250.8 198 64.6
AT1G71750 Arabidopsis thaliana HOM05D007043 ORTHO05D008951 1.5e-64 250.0 195 64.1
CARHR291040 Cardamine hirsuta HOM05D007043 ORTHO05D008951 1.5e-64 250.0 191 65.4
vmacro22651 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.5e-64 250.0 207 67.6
TAR625G0569 Trochodendron aralioides HOM05D007043 ORTHO05D008951 2.0e-64 249.6 192 66.1
THA.LOC104800095 Tarenaya hassleriana HOM05D007043 ORTHO05D008951 2.6e-64 249.2 189 65.6
Os05g0182201 Oryza sativa ssp. japonica HOM05D007043 ORTHO05D008951 2.2e-63 246.1 186 63.4
DCAR_016685 Daucus carota HOM05D007043 ORTHO05D008951 4.9e-63 245.0 190 61.6
SHI09106 Sapria himalayana HOM05D007043 ORTHO05D008951 1.1e-62 243.8 190 64.7
Ca_10649_v3 Cicer arietinum L. HOM05D007043 ORTHO05D008951 4.1e-62 241.9 187 66.3
Actinidia15616 Actinidia chinensis HOM05D007043 ORTHO05D008951 9.2e-62 240.7 154 77.3
EL10Ac8g19385 Beta vulgaris HOM05D007043 ORTHO05D008951 1.6e-61 240.0 195 64.6
MBI04_g42205_MAGBIO Magnolia biondii HOM05D007043 ORTHO05D008951 1.5e-59 233.4 258 50.4
Lj7C386G15 Lonicera japonica HOM05D007043 ORTHO05D004353 1.1e-57 227.3 155 74.8
Nn5g28865 Nelumbo nucifera HOM05D007043 ORTHO05D008951 2.4e-57 226.1 154 71.4
Lsat_1_v5_gn_9_42421 Lactuca sativa HOM05D007043 ORTHO05D008951 1.5e-56 223.4 194 62.9
PGR042G2421 Punica granatum HOM05D007043 ORTHO05D008951 2.6e-56 222.6 153 69.3
Dinv41024 Davidia involucrata HOM05D007043 ORTHO05D008951 5.8e-56 221.5 140 79.3
FvH4_2g12860 Fragaria vesca HOM05D007043 ORTHO05D008951 6.4e-55 218.0 155 67.7
Manes.18G095900 Manihot esculenta HOM05D007043 ORTHO05D008951 3.2e-54 215.7 155 70.3
CANSAT25G3234 Cannabis sativa HOM05D007043 ORTHO05D008951 8.7e-52 207.6 155 66.5
Sc26g0002900 Simmondsia chinensis HOM05D007043 ORTHO05D008951 1.9e-51 206.5 156 67.9
Mapoly0053s0101 Marchantia polymorpha HOM05D007043 ORTHO05D008951 5.6e-51 204.9 188 56.9
Zm00001eb282940 Zea mays HOM05D007043 ORTHO05D008951 8.1e-50 201.1 149 65.1
SMO011G0020 Selaginella moellendorffii HOM05D007043 ORTHO05D008951 4.0e-49 198.7 191 53.4
AagrBONN_evm.TU.Sc2ySwM_228.3072 Anthoceros agrestis HOM05D007043 ORTHO05D008951 2.4e-46 189.5 189 51.3
TPR.G17053 Trifolium pratense HOM05D007043 ORTHO05D008951 2.1e-45 186.4 192 54.2
Pp3c20_5410 Physcomitrium patens HOM05D007043 ORTHO05D008951 7.1e-38 161.4 143 57.3
Actinidia17764 Actinidia chinensis HOM05D007043 ORTHO05D008951 1.6e-37 160.2 130 65.4
CBR_g38956 Chara braunii HOM05D007043 ORTHO05D008951 9.6e-35 151.0 196 44.9
Cre08.g358900 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 8.1e-34 147.9 192 44.3
Cre17.g708100 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 1.5e-32 143.7 199 42.2
SGA_v2.0_scaffold364G49968 Striga asiatica HOM05D007043 ORTHO05D008951 1.1e-27 127.5 187 42.2
MCO13G296 Micromonas commoda HOM05D007043 ORTHO05D008951 2.5e-27 126.3 189 41.8
PRCOL_00003632 Prasinoderma coloniale HOM05D007043 ORTHO05D008951 4.0e-25 119.0 188 37.8
TPR.G793 Trifolium pratense HOM05D007043 ORTHO05D008951 3.4e-24 115.9 78 73.1
Sabra05G0151000 Salix brachista HOM05D000032 ORTHO05D004353 8.7e-20 101.3 57 77.2
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 9.4e-06 54.7 53 56.6


User provided reference genes

Program Settings