Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003178g0070 Nicotiana tabacum HOM05D006901 ORTHO05D008582 5.7e-81 304.3 165 100.0
Nitab4.5_0003443g0040 Nicotiana tabacum HOM05D006901 ORTHO05D008582 9.4e-76 287.0 165 93.3
Solyc04g072038.1 Solanum lycopersicum HOM05D006901 ORTHO05D008582 2.2e-64 249.2 164 83.5
Sopen04g028100 Solanum pennellii HOM05D006901 ORTHO05D008582 1.2e-62 243.4 158 84.2
PGSC0003DMG400025056 Solanum tuberosum HOM05D006901 ORTHO05D008582 6.6e-61 237.7 158 81.6
Peaxi162Scf00360g00917 Petunia axillaris HOM05D006901 ORTHO05D008582 2.3e-58 229.2 155 80.0
CAN.G1183.19 Capsicum annuum HOM05D006901 ORTHO05D008582 3.9e-53 211.8 166 74.7
Dinv02470 Davidia involucrata HOM05D006901 ORTHO05D008582 2.0e-49 199.5 165 67.9
CSS0011226 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 2.7e-46 189.1 164 65.2
CSS0025966 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 2.7e-46 189.1 164 65.2
Hma1.2p1_0678F.1_g202120 Hydrangea macrophylla HOM05D006901 ORTHO05D008582 1.0e-45 187.2 165 65.5
Actinidia17766 Actinidia chinensis HOM05D006901 ORTHO05D008582 1.5e-44 183.3 164 65.2
Cc10_g06470 Coffea canephora HOM05D006901 ORTHO05D008582 2.5e-44 182.6 165 64.8
Actinidia15615 Actinidia chinensis HOM05D006901 ORTHO05D008582 9.9e-41 170.6 144 68.1
SalBow7G3034 Salvia bowleyana HOM05D006901 ORTHO05D008582 6.4e-40 167.9 158 63.3
MSTRG.22112 Avicennia marina HOM05D006901 ORTHO05D008582 1.4e-39 166.8 164 61.6
Rhsim06G0092600 Rhododendron simsii HOM05D006901 ORTHO05D008582 7.1e-39 164.5 169 61.5
Duzib041G0277 Durio zibethinus HOM05D006901 ORTHO05D008582 2.1e-38 162.9 175 58.9
CANSAT25G0969 Cannabis sativa HOM05D006901 ORTHO05D008582 4.6e-38 161.8 181 56.4
Lsat_1_v5_gn_1_5120 Lactuca sativa HOM05D006901 ORTHO05D008582 2.3e-37 159.5 159 62.3
Haze_17820 Corylus avellana HOM05D006901 ORTHO05D008582 3.9e-37 158.7 181 55.2
CiPaw.16G007900 Carya illinoinensis HOM05D006901 ORTHO05D008582 5.1e-37 158.3 175 57.7
HanXRQChr02g0041271 Helianthus annuus HOM05D006901 ORTHO05D008582 2.5e-36 156.0 160 60.6
MD10G1037700 Malus domestica HOM05D006901 ORTHO05D008582 4.3e-36 155.2 173 56.1
QL02p036605 Quercus lobata HOM05D006901 ORTHO05D008582 9.6e-36 154.1 169 60.4
Duzib116G0108 Durio zibethinus HOM05D006901 ORTHO05D008582 2.8e-35 152.5 175 55.4
QL02p037117 Quercus lobata HOM05D006901 ORTHO05D008582 2.8e-35 152.5 169 59.8
SalBow8G2041 Salvia bowleyana HOM05D006901 ORTHO05D008582 3.6e-35 152.1 139 64.0
Gohir.D06G116100 Gossypium hirsutum HOM05D006901 ORTHO05D008582 1.1e-34 150.6 172 55.8
Gorai.010G133900 Gossypium raimondii HOM05D006901 ORTHO05D008582 1.1e-34 150.6 172 55.8
TAR376G0851 Trochodendron aralioides HOM05D006901 ORTHO05D008582 1.4e-34 150.2 178 52.8
Thecc.08G162300 Theobroma cacao HOM05D006901 ORTHO05D008582 1.8e-34 149.8 170 57.6
GSVIVG01013704001 Vitis vinifera HOM05D006901 ORTHO05D008582 1.8e-34 149.8 171 54.4
Oeu017620.1 Olea europaea HOM05D006901 ORTHO05D008582 5.2e-34 148.3 148 58.1
ECA247G1717 Erigeron canadensis HOM05D006901 ORTHO05D008582 3.4e-33 145.6 102 77.5
Prupe.8G043100 Prunus persica HOM05D006901 ORTHO05D008582 7.6e-33 144.4 177 55.9
Potri.002G063100 Populus trichocarpa HOM05D006901 ORTHO05D008582 1.3e-32 143.7 182 51.1
EL10Ac1g01620 Beta vulgaris HOM05D006901 ORTHO05D008582 1.7e-32 143.3 172 53.5
Sc02g0003760 Simmondsia chinensis HOM05D006901 ORTHO05D008582 1.7e-32 143.3 171 58.5
MD05G1035400 Malus domestica HOM05D006901 ORTHO05D008582 2.2e-32 142.9 174 53.4
Manes.18G095700 Manihot esculenta HOM05D006901 ORTHO05D008582 6.4e-32 141.4 182 50.5
Nn5g28858 Nelumbo nucifera HOM05D006901 ORTHO05D008582 6.4e-32 141.4 178 52.2
Ah.16g108540 Amaranthus hybridus HOM05D006901 ORTHO05D008582 8.4e-32 141.0 163 54.6
Duzib093G0981 Durio zibethinus HOM05D006901 ORTHO05D008582 1.9e-31 139.8 170 55.9
Potri.005G198100 Populus trichocarpa HOM05D006901 ORTHO05D008582 1.9e-31 139.8 182 51.1
unitig_32.g11111 Utricularia gibba HOM05D006901 ORTHO05D008582 2.4e-31 139.4 158 57.0
Sabra05G0150900 Salix brachista HOM05D006901 ORTHO05D008582 3.2e-31 139.0 179 49.7
Gohir.A06G111900 Gossypium hirsutum HOM05D006901 ORTHO05D008582 4.2e-31 138.7 156 56.4
Lalb_Chr21g0305611 Lupinus albus HOM05D006901 ORTHO05D008582 5.4e-31 138.3 165 52.7
Nn6g32189 Nelumbo nucifera HOM05D006901 ORTHO05D008582 5.4e-31 138.3 178 50.6
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 5.4e-31 138.3 184 50.5
Ciclev10002626m.g Citrus clementina HOM05D006901 ORTHO05D008582 9.3e-31 137.5 185 53.5
Atru.chr13.1989 Acer truncatum HOM05D006901 ORTHO05D008582 1.2e-30 137.1 162 59.3
SGA_v2.0_scaffold82G26198 Striga asiatica HOM05D006901 ORTHO05D008582 2.1e-30 136.3 161 56.5
Cpa.g.sc26.114 Carica papaya HOM05D006901 ORTHO05D008582 2.7e-30 136.0 183 50.8
EL10Ac1g01617 Beta vulgaris HOM05D006901 ORTHO05D008582 3.5e-30 135.6 162 54.3
TPR.G792 Trifolium pratense HOM05D006901 ORTHO05D008582 4.6e-30 135.2 165 55.2
EL10Ac4g07716 Beta vulgaris HOM05D006901 ORTHO05D008582 6.0e-30 134.8 162 54.3
arahy.Tifrunner.gnm1.ann1.96Y3Q8 Arachis hypogaea HOM05D006901 ORTHO05D008582 7.8e-30 134.4 169 54.4
FvH4_2g12890 Fragaria vesca HOM05D006901 ORTHO05D008582 7.8e-30 134.4 158 57.6
FAN24G1802 Fragaria x ananassa HOM05D006901 ORTHO05D008582 7.8e-30 134.4 158 57.6
PSO675G2506 Papaver somniferum HOM05D006901 ORTHO05D008582 7.8e-30 134.4 162 54.3
RcHm_v2.0_Chr6g0273991 Rosa chinensis HOM05D006901 ORTHO05D008582 1.0e-29 134.0 160 55.0
arahy.Tifrunner.gnm1.ann1.YZ7MCJ Arachis hypogaea HOM05D006901 ORTHO05D008582 1.3e-29 133.7 164 55.5
Medtr1g097570 Medicago truncatula HOM05D006901 ORTHO05D008582 1.7e-29 133.3 168 53.0
PGR102G0180 Punica granatum HOM05D006901 ORTHO05D008582 1.7e-29 133.3 183 51.9
PSO541G2877 Papaver somniferum HOM05D006901 ORTHO05D008582 2.3e-29 132.9 162 54.3
PGR042G3646 Punica granatum HOM05D006901 ORTHO05D008582 2.3e-29 132.9 178 51.7
Lj7E386T0 Lonicera japonica HOM05D006901 ORTHO05D008582 3.0e-29 132.5 91 80.2
MELO3C019969.2 Cucumis melo HOM05D006901 ORTHO05D008582 8.7e-29 131.0 112 67.0
FAN15G3138 Fragaria x ananassa HOM05D006901 ORTHO05D008582 8.7e-29 131.0 158 57.0
FAN20G0005 Fragaria x ananassa HOM05D006901 ORTHO05D008582 8.7e-29 131.0 158 57.0
CSS0012150 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.1e-28 130.6 158 51.3
Lj5g0019877 Lotus japonicus HOM05D006901 ORTHO05D008582 3.3e-28 129.0 165 48.5
Ca_10653_v3 Cicer arietinum L. HOM05D006901 ORTHO05D008582 5.6e-28 128.3 165 50.9
CsaV3_6G004930 Cucumis sativus L. HOM05D006901 ORTHO05D008582 5.6e-28 128.3 167 52.7
Glyma.20G171000 Glycine max HOM05D006901 ORTHO05D008582 5.6e-28 128.3 165 51.5
Psat6g189960 Pisum sativum HOM05D006901 ORTHO05D008582 7.3e-28 127.9 168 50.6
FAN27G3188 Fragaria x ananassa HOM05D006901 ORTHO05D008582 9.6e-28 127.5 159 55.3
TWI60G0595 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 1.3e-27 127.1 123 60.2
Aa31LG4G8920 Aethionema arabicum HOM05D006901 ORTHO05D008582 3.6e-27 125.6 119 63.0
TWI34G1320 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 6.2e-27 124.8 87 77.0
ClCG08G007260 Citrullus lanatus HOM05D006901 ORTHO05D008582 8.1e-27 124.4 148 54.1
Glyma.10G220600 Glycine max HOM05D006901 ORTHO05D008582 8.1e-27 124.4 165 50.9
AL2G31300 Arabidopsis lyrata HOM05D006901 ORTHO05D008582 1.1e-26 124.0 172 49.4
AT1G71730 Arabidopsis thaliana HOM05D006901 ORTHO05D008582 2.4e-26 122.9 111 64.0
CARHR291060 Cardamine hirsuta HOM05D006901 ORTHO05D008582 2.4e-26 122.9 86 73.3
Sp5g26760 Schrenkiella parvula HOM05D006901 ORTHO05D008582 4.0e-26 122.1 142 52.1
Carub.0002s1849 Capsella rubella HOM05D006901 ORTHO05D008582 5.3e-26 121.7 112 61.6
Thhalv10019220m.g Eutrema salsugineum HOM05D006901 ORTHO05D008582 9.0e-26 120.9 86 74.4
BcaC08g46599 Brassica carinata HOM05D006901 ORTHO05D008582 1.5e-25 120.2 168 49.4
C06p45780 Brassica napus HOM05D006901 ORTHO05D008582 1.5e-25 120.2 168 49.4
BolC6t39630H Brassica oleracea HOM05D006901 ORTHO05D008582 1.5e-25 120.2 168 49.4
Eucgr.F02679 Eucalyptus grandis HOM05D006901 ORTHO05D008582 1.5e-25 120.2 84 76.2
Phvul.007G084500 Phaseolus vulgaris HOM05D006901 ORTHO05D008582 1.5e-25 120.2 165 51.5
THA.LOC104810483 Tarenaya hassleriana HOM05D006901 ORTHO05D008582 4.5e-25 118.6 167 50.9
VMungo0720G0575 Vigna mungo HOM05D006901 ORTHO05D008582 4.5e-25 118.6 150 53.3
ATR1120G022 Amborella trichopoda HOM05D006901 ORTHO05D008582 7.6e-25 117.9 93 66.7
A07p37880 Brassica napus HOM05D006901 ORTHO05D008582 1.3e-24 117.1 163 47.9
BraA07t31353Z Brassica rapa HOM05D006901 ORTHO05D008582 1.3e-24 117.1 163 47.9
AagrBONN_evm.TU.Sc2ySwM_228.5132 Anthoceros agrestis HOM05D006901 ORTHO05D008582 8.4e-24 114.4 114 61.4
Lj5g0009364 Lotus japonicus HOM05D006901 ORTHO05D008582 8.4e-24 114.4 165 46.7
Sed0007149 Sechium edule HOM05D006901 ORTHO05D008582 1.1e-23 114.0 86 73.3
HPP92_002808 Vanilla planifolia HOM05D006901 ORTHO05D008582 1.1e-23 114.0 87 69.0
HPP92_002865 Vanilla planifolia HOM05D006901 ORTHO05D008582 1.1e-23 114.0 87 69.0
SEGI_14424 Sequoiadendron giganteum HOM05D006901 ORTHO05D008582 4.2e-23 112.1 88 69.3
CSS0007119 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.3e-21 107.1 114 55.3
SMO351G0406 Selaginella moellendorffii HOM05D006901 ORTHO05D008582 2.3e-21 106.3 83 71.1
Pp3c17_20520 Physcomitrium patens HOM05D006901 ORTHO05D008582 5.6e-20 101.7 80 67.5
DCAR_001194 Daucus carota HOM05D006901 ORTHO05D008582 4.8e-19 98.6 64 81.2
Os05g0182000 Oryza sativa ssp. japonica HOM05D006901 ORTHO05D008582 9.0e-18 94.4 83 62.7
Zm00001eb346910 Zea mays HOM05D006901 ORTHO05D008582 5.8e-17 91.7 160 42.5
MCO05G280 Micromonas commoda HOM05D006901 ORTHO05D008582 4.9e-16 88.6 84 54.8
CSS0023453 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 8.4e-16 87.8 92 55.4
CBR_g54341 Chara braunii HOM05D006901 ORTHO05D008582 8.4e-16 87.8 104 49.0
Cre03.g176500 Chlamydomonas reinhardtii HOM05D006901 ORTHO05D008582 6.7e-13 78.2 114 44.7
Ah.08g214420 Amaranthus hybridus HOM05D006901 ORTHO05D008582 9.0e-10 67.8 65 61.5


User provided reference genes

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