Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003165g0010 Nicotiana tabacum HOM05D009059 ORTHO05D011207 2.5e-53 211.8 106 100.0
Nitab4.5_0001626g0020 Nicotiana tabacum HOM05D009059 ORTHO05D011207 3.8e-46 188.0 106 87.7
Nitab4.5_0001626g0010 Nicotiana tabacum HOM05D009059 ORTHO05D011207 1.5e-45 186.0 106 86.8
Nitab4.5_0005404g0010 Nicotiana tabacum HOM05D009059 ORTHO05D011207 3.2e-45 184.9 106 86.8
Nitab4.5_0005347g0010 Nicotiana tabacum HOM05D009059 ORTHO05D011207 5.5e-45 184.1 106 86.8
Nitab4.5_0003765g0030 Nicotiana tabacum HOM05D009059 ORTHO05D011207 1.7e-41 172.6 107 81.3
Nitab4.5_0001882g0010 Nicotiana tabacum HOM05D009059 ORTHO05D011207 6.3e-41 170.6 106 78.3
Nitab4.5_0001882g0020 Nicotiana tabacum HOM05D009059 ORTHO05D011207 2.4e-32 142.1 85 80.0
Solyc07g006380.3 Solanum lycopersicum HOM05D009059 ORTHO05D011207 5.8e-26 120.9 104 63.5
Sopen07g002470 Solanum pennellii HOM05D009059 ORTHO05D011207 1.7e-25 119.4 104 64.4
CAN.G584.62 Capsicum annuum HOM05D009059 ORTHO05D011207 2.4e-24 115.5 105 57.1
Sopen11g012530 Solanum pennellii HOM05D009059 ORTHO05D011207 2.0e-23 112.5 106 59.4
Solyc11g028070.2 Solanum lycopersicum HOM05D009059 ORTHO05D011207 2.7e-23 112.1 106 58.5
Peaxi162Scf00297g00815 Petunia axillaris HOM05D009059 ORTHO05D011207 1.3e-22 109.8 106 52.8
Solyc11g028040.2 Solanum lycopersicum HOM05D009059 ORTHO05D011207 1.3e-22 109.8 106 58.5
CAN.G584.63 Capsicum annuum HOM05D009059 ORTHO05D011207 8.6e-22 107.1 98 56.1
Peaxi162Scf00297g00816 Petunia axillaris HOM05D009059 ORTHO05D011207 2.5e-21 105.5 103 53.4
Peaxi162Scf00005g00041 Petunia axillaris HOM05D009059 ORTHO05D011207 2.8e-20 102.1 106 50.0
Solyc07g150108.1 Solanum lycopersicum HOM05D009059 ORTHO05D011207 1.1e-19 100.1 77 63.6
Peaxi162Scf00005g00035 Petunia axillaris HOM05D009059 ORTHO05D011207 5.8e-18 94.4 106 46.2
Solyc07g016095.1 Solanum lycopersicum HOM05D009059 ORTHO05D011207 7.5e-18 94.0 77 58.4
Nitab4.5_0005347g0040 Nicotiana tabacum HOM05D001775 ORTHO05D006205 2.9e-17 92.0 83 61.4
CAN.G1610.5 Capsicum annuum HOM05D009059 ORTHO05D011207 4.9e-17 91.3 104 53.8
CAN.G534.6 Capsicum annuum HOM05D009059 ORTHO05D011207 1.4e-16 89.7 106 52.8
CAN.G584.65 Capsicum annuum HOM05D009059 ORTHO05D011207 1.4e-16 89.7 104 53.8
CAN.G584.64 Capsicum annuum HOM05D009059 ORTHO05D011207 1.9e-16 89.4 105 52.4
CAN.G584.67 Capsicum annuum HOM05D009059 ORTHO05D011207 2.4e-16 89.0 104 53.8
CAN.G1084.27 Capsicum annuum HOM05D009059 ORTHO05D011207 3.2e-16 88.6 104 53.8
CAN.G1084.24 Capsicum annuum HOM05D009059 ORTHO05D011207 3.3e-13 78.6 107 45.8
CAN.G5797.1 Capsicum annuum HOM05D009059 ORTHO05D011207 3.1e-11 72.0 57 56.1
Solyc07g016120.3 Solanum lycopersicum HOM05D009059 ORTHO05D011207 3.1e-11 72.0 59 59.3
Sopen07g005870 Solanum pennellii HOM05D000082 ORTHO05D000038 5.8e-10 67.8 55 63.6
CAN.G3387.1 Capsicum annuum HOM05D009059 ORTHO05D011207 2.9e-09 65.5 83 48.2
CAN.G1610.6 Capsicum annuum HOM05D009059 ORTHO05D011207 3.8e-09 65.1 76 48.7
CAN.G1084.28 Capsicum annuum HOM05D009059 ORTHO05D011207 4.9e-09 64.7 77 46.8
Nitab4.5_0000374g0060 Nicotiana tabacum HOM05D001231 ORTHO05D001012 5.4e-08 61.2 77 41.6
SalBow6G2289 Salvia bowleyana HOM05D001231 ORTHO05D001012 7.1e-08 60.8 71 43.7
CAN.G976.2 Capsicum annuum HOM05D001231 ORTHO05D001012 1.2e-07 60.1 77 41.6
CAN.G458.12 Capsicum annuum HOM05D001231 ORTHO05D001012 2.7e-07 58.9 58 43.1
Solyc07g016113.1 Solanum lycopersicum HOM05D009059 ORTHO05D011207 4.6e-07 58.2 103 37.9
Migut.E00740 Erythranthe guttata HOM05D001231 ORTHO05D001012 6.0e-07 57.8 62 37.1
PGSC0003DMG400029484 Solanum tuberosum HOM05D001231 ORTHO05D001012 6.0e-07 57.8 60 41.7
Nitab4.5_0009181g0010 Nicotiana tabacum HOM05D001231 ORTHO05D001012 1.0e-06 57.0 77 40.3
VMungo1309G2262 Vigna mungo HOM05D001231 ORTHO05D001012 1.7e-06 56.2 67 40.3
PGSC0003DMG400015129 Solanum tuberosum HOM05D001231 ORTHO05D001012 2.3e-06 55.8 75 41.3
Medtr3g032570 Medicago truncatula HOM05D001231 ORTHO05D001012 3.0e-06 55.5 79 38.0
Hund02690 Selenicereus undatus HOM05D001231 ORTHO05D001012 3.0e-06 55.5 68 42.6
Thhalv10005229m.g Eutrema salsugineum HOM05D001231 ORTHO05D001012 3.9e-06 55.1 74 39.2
PGSC0003DMG400015132 Solanum tuberosum HOM05D001231 ORTHO05D001012 3.9e-06 55.1 63 41.3
Os04g0189400 Oryza sativa ssp. japonica HOM05D001231 ORTHO05D001012 5.1e-06 54.7 46 47.8
Solyc07g007750.3 Solanum lycopersicum HOM05D001231 ORTHO05D001012 5.1e-06 54.7 75 41.3
Phvul.003G282500 Phaseolus vulgaris HOM05D001231 ORTHO05D001012 6.6e-06 54.3 75 38.7
CARHR144790 Cardamine hirsuta HOM05D001231 ORTHO05D001012 8.6e-06 53.9 76 39.5
Thhalv10023787m.g Eutrema salsugineum HOM05D001231 ORTHO05D001012 8.6e-06 53.9 67 41.8
Glyma.08G268000 Glycine max HOM05D001231 ORTHO05D001012 8.6e-06 53.9 75 37.3
Lj4g0025743 Lotus japonicus HOM05D001231 ORTHO05D001012 8.6e-06 53.9 75 40.0
Medtr8g075980 Medicago truncatula HOM05D001231 ORTHO05D001012 8.6e-06 53.9 69 34.8
Nn3g18726 Nelumbo nucifera HOM05D001231 ORTHO05D001012 8.6e-06 53.9 76 40.8
Solyc07g007755.1 Solanum lycopersicum HOM05D001231 ORTHO05D001012 8.6e-06 53.9 77 41.6


User provided reference genes

Program Settings