Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003163g0070 Nicotiana tabacum HOM05D000846 ORTHO05D284135 1.8e-57 225.7 118 100.0
Nitab4.5_0003163g0020 Nicotiana tabacum HOM05D000846 ORTHO05D008111 8.1e-13 77.4 57 68.4
Nitab4.5_0003163g0010 Nicotiana tabacum HOM05D000846 ORTHO05D001340 6.9e-12 74.3 39 89.7
Nitab4.5_0012584g0010 Nicotiana tabacum HOM05D000846 ORTHO05D001340 2.6e-11 72.4 36 94.4
Nitab4.5_0003099g0010 Nicotiana tabacum HOM05D000846 ORTHO05D001340 9.3e-09 63.9 54 59.3
Nitab4.5_0000551g0220 Nicotiana tabacum HOM05D000846 ORTHO05D001340 2.3e-07 59.3 39 74.4
Peaxi162Scf00791g00023 Petunia axillaris HOM05D000846 ORTHO05D001340 3.0e-07 58.9 57 52.6
Peaxi162Scf00021g02619 Petunia axillaris HOM05D000846 ORTHO05D001340 3.9e-07 58.5 39 71.8
EL10Ac4g10381 Beta vulgaris HOM05D000846 ORTHO05D001340 6.7e-07 57.8 43 62.8
CAN.G245.7 Capsicum annuum HOM05D000846 ORTHO05D001340 6.7e-07 57.8 38 73.7
Solyc01g044360.4 Solanum lycopersicum HOM05D000846 ORTHO05D001340 6.7e-07 57.8 38 73.7
Sopen01g018340 Solanum pennellii HOM05D000846 ORTHO05D001340 6.7e-07 57.8 38 73.7
PGSC0003DMG400015862 Solanum tuberosum HOM05D000846 ORTHO05D001340 6.7e-07 57.8 38 73.7
Nitab4.5_0000645g0070 Nicotiana tabacum HOM05D000846 ORTHO05D001340 8.7e-07 57.4 50 58.0
Peaxi162Scf01890g00028 Petunia axillaris HOM05D000846 ORTHO05D001340 1.1e-06 57.0 46 60.9
Peaxi162Scf00064g00024 Petunia axillaris HOM05D000846 ORTHO05D001340 1.5e-06 56.6 38 63.2
Cfa009569 Carpinus fangiana HOM05D000846 ORTHO05D001340 2.5e-06 55.8 38 71.1
Haze_22949 Corylus avellana HOM05D000846 ORTHO05D001340 2.5e-06 55.8 38 71.1
MD11G1005800 Malus domestica HOM05D000846 ORTHO05D001340 2.5e-06 55.8 38 71.1
Nitab4.5_0002411g0030 Nicotiana tabacum HOM05D000846 ORTHO05D001340 2.5e-06 55.8 38 71.1
Prupe.6G004500 Prunus persica HOM05D000846 ORTHO05D001340 2.5e-06 55.8 38 71.1
PGR119G0816 Punica granatum HOM05D000846 ORTHO05D001340 2.5e-06 55.8 38 71.1
Duzib177G0002 Durio zibethinus HOM05D000846 ORTHO05D001340 3.3e-06 55.5 38 68.4
vmacro04234 Vaccinium macrocarpon HOM05D000846 ORTHO05D001340 3.3e-06 55.5 38 68.4
VMungo0251G2214 Vigna mungo HOM05D000846 ORTHO05D001340 3.3e-06 55.5 38 65.8
Oeu047829.1 Olea europaea HOM05D000846 ORTHO05D001340 4.3e-06 55.1 38 68.4
Peaxi162Scf01002g00214 Petunia axillaris HOM05D000846 ORTHO05D001340 4.3e-06 55.1 38 65.8
Sc13g0002580 Simmondsia chinensis HOM05D000846 ORTHO05D001340 4.3e-06 55.1 43 60.5
Aqoxy1G00464 Aquilegia oxysepala HOM05D000846 ORTHO05D001340 5.6e-06 54.7 38 68.4
EL10Ac3g06839 Beta vulgaris HOM05D000846 ORTHO05D001340 5.6e-06 54.7 38 68.4
Cfa017660 Carpinus fangiana HOM05D000846 ORTHO05D001340 5.6e-06 54.7 38 68.4
Haze_20488 Corylus avellana HOM05D000846 ORTHO05D001340 5.6e-06 54.7 38 68.4
Dinv13463 Davidia involucrata HOM05D000846 ORTHO05D001340 5.6e-06 54.7 38 68.4
MD03G1004600 Malus domestica HOM05D000846 ORTHO05D001340 5.6e-06 54.7 38 68.4
Nn2g15844 Nelumbo nucifera HOM05D000846 ORTHO05D001340 5.6e-06 54.7 38 68.4
Peaxi162Scf00115g00051 Petunia axillaris HOM05D000846 ORTHO05D001340 5.6e-06 54.7 39 64.1
QL01p008767 Quercus lobata HOM05D000846 ORTHO05D001340 5.6e-06 54.7 38 68.4
Hund19223 Selenicereus undatus HOM05D000846 ORTHO05D001340 5.6e-06 54.7 38 68.4
arahy.Tifrunner.gnm1.ann1.8E14VW Arachis hypogaea HOM05D000846 ORTHO05D001340 7.4e-06 54.3 38 68.4
arahy.Tifrunner.gnm1.ann1.RBH7VQ Arachis hypogaea HOM05D000846 ORTHO05D001340 7.4e-06 54.3 38 68.4
AUR62015278 Chenopodium quinoa HOM05D000846 ORTHO05D001340 7.4e-06 54.3 38 65.8
AUR62019169 Chenopodium quinoa HOM05D000846 ORTHO05D001340 7.4e-06 54.3 38 65.8
AUR62032726 Chenopodium quinoa HOM05D000846 ORTHO05D001340 7.4e-06 54.3 38 65.8
AUR62040910 Chenopodium quinoa HOM05D000846 ORTHO05D001340 7.4e-06 54.3 38 65.8
MELO3C008811.2 Cucumis melo HOM05D000846 ORTHO05D001340 7.4e-06 54.3 38 65.8
CsaV3_4G012200 Cucumis sativus L. HOM05D000846 ORTHO05D001340 7.4e-06 54.3 38 65.8
Hma1.2p1_0062F.1_g034260 Hydrangea macrophylla HOM05D000846 ORTHO05D001340 7.4e-06 54.3 38 65.8
Lj4g0011106 Lotus japonicus HOM05D000846 ORTHO05D001340 7.4e-06 54.3 38 68.4
MD03G1004700 Malus domestica HOM05D000846 ORTHO05D001340 7.4e-06 54.3 38 68.4
Phvul.002G237200 Phaseolus vulgaris HOM05D000846 ORTHO05D001340 7.4e-06 54.3 38 65.8
Rhsim13G0232100 Rhododendron simsii HOM05D000846 ORTHO05D001340 7.4e-06 54.3 38 68.4
Sed0016818 Sechium edule HOM05D000846 ORTHO05D001340 7.4e-06 54.3 38 63.2
TAR369G0915 Trochodendron aralioides HOM05D000846 ORTHO05D001340 7.4e-06 54.3 38 68.4
TAR633G1516 Trochodendron aralioides HOM05D000846 ORTHO05D001340 7.4e-06 54.3 38 68.4
FvH4_1g28300 Fragaria vesca HOM05D000846 ORTHO05D001340 9.6e-06 53.9 38 65.8
FAN19G1021 Fragaria x ananassa HOM05D000846 ORTHO05D001340 9.6e-06 53.9 38 65.8
Nn7g35879 Nelumbo nucifera HOM05D000846 ORTHO05D001340 9.6e-06 53.9 38 65.8
Peaxi162Scf00738g00214 Petunia axillaris HOM05D000846 ORTHO05D001340 9.6e-06 53.9 38 68.4
RcHm_v2.0_Chr3g0496831 Rosa chinensis HOM05D000846 ORTHO05D001340 9.6e-06 53.9 38 65.8
Sed0017696 Sechium edule HOM05D000846 ORTHO05D001340 9.6e-06 53.9 38 65.8
SGA_v2.0_scaffold6G03295 Striga asiatica HOM05D000846 ORTHO05D001340 9.6e-06 53.9 38 63.2
TAR623G1742 Trochodendron aralioides HOM05D000846 ORTHO05D001340 9.6e-06 53.9 38 68.4
GSVIVG01025460001 Vitis vinifera HOM05D000846 ORTHO05D001340 9.6e-06 53.9 38 68.4


User provided reference genes

Program Settings