Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003161g0040 Nicotiana tabacum HOM05D004071 ORTHO05D004501 2.9e-91 338.6 176 100.0
Nitab4.5_0000612g0160 Nicotiana tabacum HOM05D004071 ORTHO05D004501 1.1e-87 326.6 173 97.7
CAN.G153.14 Capsicum annuum HOM05D004071 ORTHO05D004501 5.2e-64 248.1 130 91.5
Nitab4.5_0004420g0040 Nicotiana tabacum HOM05D004071 ORTHO05D004501 2.0e-63 246.1 130 91.5
PGSC0003DMG400018768 Solanum tuberosum HOM05D004071 ORTHO05D004501 9.8e-63 243.8 130 89.2
Peaxi162Scf01056g00238 Petunia axillaris HOM05D004071 ORTHO05D004501 3.7e-62 241.9 130 91.5
Lsat_1_v5_gn_4_175840 Lactuca sativa HOM05D004071 ORTHO05D004501 6.3e-62 241.1 130 85.4
CSS0021599 Camellia sinensis var. sinensis HOM05D004071 ORTHO05D004501 1.1e-61 240.4 130 86.9
PGSC0003DMG400010091 Solanum tuberosum HOM05D004071 ORTHO05D004501 1.8e-61 239.6 130 89.2
Dinv34868 Davidia involucrata HOM05D004071 ORTHO05D004501 5.4e-61 238.0 130 85.4
Solyc03g045090.3 Solanum lycopersicum HOM05D004071 ORTHO05D004501 5.4e-61 238.0 130 89.2
Sopen03g009550 Solanum pennellii HOM05D004071 ORTHO05D004501 1.6e-60 236.5 130 88.5
Actinidia36304 Actinidia chinensis HOM05D004071 ORTHO05D004501 3.5e-60 235.3 130 83.8
GSVIVG01036463001 Vitis vinifera HOM05D004071 ORTHO05D004501 3.5e-60 235.3 130 84.6
Rhsim10G0064500 Rhododendron simsii HOM05D004071 ORTHO05D004501 4.5e-60 235.0 129 86.0
Hma1.2p1_0550F.1_g177140 Hydrangea macrophylla HOM05D004071 ORTHO05D004501 7.8e-60 234.2 130 81.5
Ciclev10012116m.g Citrus clementina HOM05D004071 ORTHO05D004501 1.0e-59 233.8 130 84.6
Gorai.001G203600 Gossypium raimondii HOM05D004071 ORTHO05D004501 1.0e-59 233.8 130 83.1
Oeu049330.1 Olea europaea HOM05D004071 ORTHO05D004501 1.0e-59 233.8 130 81.5
SGA_v2.0_scaffold204G41658 Striga asiatica HOM05D004071 ORTHO05D004501 1.3e-59 233.4 130 83.1
Thecc.04G143800 Theobroma cacao HOM05D004071 ORTHO05D004501 1.3e-59 233.4 130 83.8
Cc07_g04980 Coffea canephora HOM05D004071 ORTHO05D004501 2.3e-59 232.6 130 84.6
Potri.004G104900 Populus trichocarpa HOM05D004071 ORTHO05D004501 2.3e-59 232.6 131 80.9
Cpa.g.sc179.42 Carica papaya HOM05D004071 ORTHO05D004501 2.9e-59 232.3 130 82.3
Migut.K00863 Erythranthe guttata HOM05D004071 ORTHO05D004501 2.9e-59 232.3 130 84.6
Duzib268G0320 Durio zibethinus HOM05D004071 ORTHO05D004501 5.0e-59 231.5 130 82.3
Gohir.D07G183200 Gossypium hirsutum HOM05D004071 ORTHO05D004501 5.0e-59 231.5 130 82.3
Cfa007968 Carpinus fangiana HOM05D004071 ORTHO05D004501 6.6e-59 231.1 130 83.1
COL.COLO4_04619 Corchorus olitorius HOM05D004071 ORTHO05D004501 6.6e-59 231.1 130 82.3
Gohir.A07G176100 Gossypium hirsutum HOM05D004071 ORTHO05D004501 8.6e-59 230.7 130 81.5
MSTRG.23829 Avicennia marina HOM05D004071 ORTHO05D004501 1.1e-58 230.3 130 86.2
THA.LOC104827150 Tarenaya hassleriana HOM05D004071 ORTHO05D004501 1.1e-58 230.3 130 80.0
Atru.chr10.1868 Acer truncatum HOM05D004071 ORTHO05D004501 1.5e-58 229.9 130 81.5
Carub.0003s0151 Capsella rubella HOM05D004071 ORTHO05D004501 1.5e-58 229.9 130 80.0
ECA232G0981 Erigeron canadensis HOM05D004071 ORTHO05D004501 1.5e-58 229.9 134 82.1
HanXRQChr09g0263441 Helianthus annuus HOM05D004071 ORTHO05D004501 1.9e-58 229.6 134 77.6
CiPaw.04G003700 Carya illinoinensis HOM05D004071 ORTHO05D004501 3.3e-58 228.8 130 82.3
Hma1.2p1_0136F.1_g061955 Hydrangea macrophylla HOM05D004071 ORTHO05D004501 3.3e-58 228.8 130 80.8
Lalb_Chr17g0336551 Lupinus albus HOM05D004071 ORTHO05D004501 3.3e-58 228.8 130 81.5
Potri.017G110600 Populus trichocarpa HOM05D004071 ORTHO05D004501 3.3e-58 228.8 130 80.0
Aa31LG5G12930 Aethionema arabicum HOM05D004071 ORTHO05D004501 4.3e-58 228.4 130 79.2
CANSAT64G0921 Cannabis sativa HOM05D004071 ORTHO05D004501 4.3e-58 228.4 130 81.5
Ah.16g102220 Amaranthus hybridus HOM05D004071 ORTHO05D004501 5.6e-58 228.0 130 80.8
MELO3C022067.2 Cucumis melo HOM05D004071 ORTHO05D004501 5.6e-58 228.0 130 80.0
CsaV3_5G039030 Cucumis sativus L. HOM05D004071 ORTHO05D004501 5.6e-58 228.0 130 80.0
Duzib133G0960 Durio zibethinus HOM05D004071 ORTHO05D004501 7.3e-58 227.6 130 82.3
Thhalv10021061m.g Eutrema salsugineum HOM05D004071 ORTHO05D004501 7.3e-58 227.6 130 78.5
CARHR076390 Cardamine hirsuta HOM05D004071 ORTHO05D004501 1.2e-57 226.9 130 79.2
Gohir.A08G037600 Gossypium hirsutum HOM05D004071 ORTHO05D004501 1.2e-57 226.9 130 80.8
AUR62008952 Chenopodium quinoa HOM05D004071 ORTHO05D004501 1.6e-57 226.5 130 80.0
AT3G02420 Arabidopsis thaliana HOM05D004071 ORTHO05D004501 2.1e-57 226.1 130 78.5
Hund13742 Selenicereus undatus HOM05D004071 ORTHO05D004501 2.1e-57 226.1 130 81.5
Lsat_1_v5_gn_2_86560 Lactuca sativa HOM05D004071 ORTHO05D004501 2.8e-57 225.7 129 78.3
Oeu025120.1 Olea europaea HOM05D004071 ORTHO05D004501 2.8e-57 225.7 129 77.5
Sed0017773 Sechium edule HOM05D004071 ORTHO05D004501 2.8e-57 225.7 130 79.2
vmacro05581 Vaccinium macrocarpon HOM05D004071 ORTHO05D004501 2.8e-57 225.7 158 72.2
CSS0015718 Camellia sinensis var. sinensis HOM05D004071 ORTHO05D004501 3.6e-57 225.3 130 81.5
Gorai.004G047400 Gossypium raimondii HOM05D004071 ORTHO05D004501 3.6e-57 225.3 130 80.0
Nn4g23653 Nelumbo nucifera HOM05D004071 ORTHO05D004501 6.1e-57 224.6 128 82.0
SalBow1G4702 Salvia bowleyana HOM05D004071 ORTHO05D004501 6.1e-57 224.6 130 79.2
SalBow1G4945 Salvia bowleyana HOM05D004071 ORTHO05D004501 6.1e-57 224.6 130 79.2
TWI74G0934 Tripterygium wilfordii HOM05D004071 ORTHO05D004501 6.1e-57 224.6 130 81.5
EL10Ac2g04623 Beta vulgaris HOM05D004071 ORTHO05D004501 8.0e-57 224.2 130 79.2
Migut.H00537 Erythranthe guttata HOM05D004071 ORTHO05D004501 8.0e-57 224.2 130 79.2
Rhsim08G0080100 Rhododendron simsii HOM05D004071 ORTHO05D004501 8.0e-57 224.2 130 82.3
BcaB04g21412 Brassica carinata HOM05D004071 ORTHO05D004501 1.0e-56 223.8 130 76.9
BcaC09g47699 Brassica carinata HOM05D004071 ORTHO05D004501 1.0e-56 223.8 130 76.9
CiPaw.03G006000 Carya illinoinensis HOM05D004071 ORTHO05D004501 1.4e-56 223.4 130 80.0
BcaC05g30354 Brassica carinata HOM05D004071 ORTHO05D004501 2.3e-56 222.6 130 76.2
PSO063G1546 Papaver somniferum HOM05D004071 ORTHO05D004501 2.3e-56 222.6 130 78.5
PSO782G5396 Papaver somniferum HOM05D004071 ORTHO05D004501 2.3e-56 222.6 130 79.2
Dinv33918 Davidia involucrata HOM05D004071 ORTHO05D004501 4.0e-56 221.9 130 83.1
MD09G1082200 Malus domestica HOM05D004071 ORTHO05D004501 4.0e-56 221.9 130 77.7
Manes.02G065500 Manihot esculenta HOM05D004071 ORTHO05D004501 4.0e-56 221.9 130 80.8
Psat1g062200 Pisum sativum HOM05D004071 ORTHO05D004501 4.0e-56 221.9 130 78.5
Sp3g01460 Schrenkiella parvula HOM05D004071 ORTHO05D004501 4.0e-56 221.9 129 76.7
MD17G1072900 Malus domestica HOM05D004071 ORTHO05D004501 5.2e-56 221.5 130 78.5
Gorai.001G082400 Gossypium raimondii HOM05D004071 ORTHO05D004501 6.8e-56 221.1 130 78.5
TAR629G1013 Trochodendron aralioides HOM05D004071 ORTHO05D004501 8.9e-56 220.7 130 79.2
Actinidia26308 Actinidia chinensis HOM05D004071 ORTHO05D004501 1.2e-55 220.3 130 80.8
Gohir.D07G078000 Gossypium hirsutum HOM05D004071 ORTHO05D004501 1.5e-55 219.9 130 77.7
Lj4A130T17 Lonicera japonica HOM05D004071 ORTHO05D004501 1.5e-55 219.9 130 80.0
Oeu032872.2 Olea europaea HOM05D004071 ORTHO05D004501 1.5e-55 219.9 130 80.0
RcHm_v2.0_Chr2g0163461 Rosa chinensis HOM05D004071 ORTHO05D004501 2.0e-55 219.5 130 79.2
TPR.G28780 Trifolium pratense HOM05D004071 ORTHO05D004501 2.0e-55 219.5 130 78.5
TPR.G9685 Trifolium pratense HOM05D004071 ORTHO05D004501 2.0e-55 219.5 130 78.5
Gohir.A07G073300 Gossypium hirsutum HOM05D004071 ORTHO05D004501 2.6e-55 219.2 130 76.2
Gohir.D08G047900 Gossypium hirsutum HOM05D004071 ORTHO05D004501 2.6e-55 219.2 130 77.7
PGR042G1023 Punica granatum HOM05D004071 ORTHO05D004501 2.6e-55 219.2 130 78.5
Medtr6g016780 Medicago truncatula HOM05D004071 ORTHO05D004501 3.4e-55 218.8 130 77.7
unitig_62.g23397 Utricularia gibba HOM05D004071 ORTHO05D004501 3.4e-55 218.8 130 76.2
Prupe.3G241500 Prunus persica HOM05D004071 ORTHO05D004501 4.4e-55 218.4 130 77.7
Ca_14084_v3 Cicer arietinum L. HOM05D004071 ORTHO05D004501 5.7e-55 218.0 130 76.9
ClCG11G005270 Citrullus lanatus HOM05D004071 ORTHO05D004501 7.5e-55 217.6 130 76.9
Glyma.13G047900 Glycine max HOM05D004071 ORTHO05D004501 9.8e-55 217.2 129 77.5
FAN05G3345 Fragaria x ananassa HOM05D004071 ORTHO05D004501 1.7e-54 216.5 130 76.2
BraA05t23141Z Brassica rapa HOM05D004071 ORTHO05D004501 2.9e-54 215.7 130 75.4
Os05g0589000 Oryza sativa ssp. japonica HOM05D004071 ORTHO05D004501 3.7e-54 215.3 131 74.8
Phvul.004G073300 Phaseolus vulgaris HOM05D004071 ORTHO05D004501 3.7e-54 215.3 130 76.2
VMungo0464G1781 Vigna mungo HOM05D004071 ORTHO05D004501 3.7e-54 215.3 130 76.2
arahy.Tifrunner.gnm1.ann1.SG5ZZ4 Arachis hypogaea HOM05D004071 ORTHO05D004501 4.9e-54 214.9 131 75.6
Nn3g17651 Nelumbo nucifera HOM05D004071 ORTHO05D004501 4.9e-54 214.9 130 77.7
CDE08G1388 Ceratophyllum demersum HOM05D004071 ORTHO05D004501 6.4e-54 214.5 136 72.1
FAN02G1076 Fragaria x ananassa HOM05D000085 ORTHO05D004501 6.4e-54 214.5 129 76.0
TAR622G0876 Trochodendron aralioides HOM05D004071 ORTHO05D004501 6.4e-54 214.5 127 79.5
arahy.Tifrunner.gnm1.ann1.UUQR92 Arachis hypogaea HOM05D004071 ORTHO05D004501 8.3e-54 214.2 131 75.6
MBI16_g36053_MAGBIO Magnolia biondii HOM05D004071 ORTHO05D004501 1.1e-53 213.8 130 79.2
FvH4_6g45520 Fragaria vesca HOM05D004071 ORTHO05D004501 1.4e-53 213.4 130 75.4
Zm00001eb297500 Zea mays HOM05D004071 ORTHO05D004501 1.4e-53 213.4 131 72.5
FAN14G5468 Fragaria x ananassa HOM05D000085 ORTHO05D004501 1.8e-53 213.0 129 75.2
vmacro18101 Vaccinium macrocarpon HOM05D004071 ORTHO05D004501 1.8e-53 213.0 130 78.5
Os01g0604700 Oryza sativa ssp. japonica HOM05D004071 ORTHO05D004501 3.2e-53 212.2 131 74.0
SGA_v2.0_scaffold150G36618 Striga asiatica HOM05D002617 ORTHO05D009035 3.2e-53 212.2 129 76.7
Lj2g0019369 Lotus japonicus HOM05D004071 ORTHO05D004501 5.4e-53 211.5 130 76.2
TWI77G0983 Tripterygium wilfordii HOM05D004071 ORTHO05D004501 5.4e-53 211.5 130 76.9
FAN09G0395 Fragaria x ananassa HOM05D000085 ORTHO05D004501 9.2e-53 210.7 130 74.6
arahy.Tifrunner.gnm1.ann1.85GVTZ Arachis hypogaea HOM05D004071 ORTHO05D004501 2.0e-52 209.5 130 75.4
DCAR_007521 Daucus carota HOM05D000912 ORTHO05D004501 2.0e-52 209.5 127 74.0
HanXRQChr07g0200191 Helianthus annuus HOM05D004071 ORTHO05D004501 1.0e-51 207.2 129 73.6
CDE06G1497 Ceratophyllum demersum HOM05D004071 ORTHO05D004501 1.3e-51 206.8 136 69.1
AUR62014550 Chenopodium quinoa HOM05D004071 ORTHO05D004501 2.3e-51 206.1 144 70.1
Aqoxy3G00414 Aquilegia oxysepala HOM05D004071 ORTHO05D004501 1.1e-50 203.8 130 72.3
Zm00001eb161490 Zea mays HOM05D004071 ORTHO05D004501 1.5e-50 203.4 131 71.0
PSO017G6828 Papaver somniferum HOM05D004071 ORTHO05D004501 4.3e-50 201.8 130 71.5
Sabra04G0076900 Salix brachista HOM05D004071 ORTHO05D004501 5.6e-50 201.4 179 58.1
PSO478G0222 Papaver somniferum HOM05D004071 ORTHO05D004501 1.2e-49 200.3 130 71.5
HPP92_011599 Vanilla planifolia HOM05D004071 ORTHO05D004501 2.8e-49 199.1 130 70.8
HPP92_003788 Vanilla planifolia HOM05D004071 ORTHO05D004501 2.3e-48 196.1 136 65.4
Nitab4.5_0009272g0060 Nicotiana tabacum HOM05D004071 ORTHO05D004501 3.1e-48 195.7 102 91.2
unitig_32.g10761 Utricularia gibba HOM05D004071 ORTHO05D004501 3.1e-48 195.7 130 70.8
Sed0022702 Sechium edule HOM05D004071 ORTHO05D004501 9.8e-47 190.7 111 79.3
Sed0014814 Sechium edule HOM05D004071 ORTHO05D004501 8.3e-46 187.6 130 65.4
ClCG05G012000 Citrullus lanatus HOM05D004071 ORTHO05D004501 1.4e-45 186.8 130 65.4
Os01g0641700 Oryza sativa ssp. japonica HOM05D004071 ORTHO05D004501 1.9e-45 186.4 131 65.6
SEGI_38032 Sequoiadendron giganteum HOM05D004071 ORTHO05D004501 2.7e-44 182.6 126 65.1
Zm00001eb158750 Zea mays HOM05D004071 ORTHO05D004501 1.0e-43 180.6 131 61.8
QL02p053385 Quercus lobata HOM05D004071 ORTHO05D004501 3.3e-42 175.6 102 79.4
Hund16109 Selenicereus undatus HOM05D004071 ORTHO05D004501 1.5e-39 166.8 102 72.5
DCAR_010977 Daucus carota HOM05D004071 ORTHO05D004501 2.6e-39 166.0 182 51.6
CDE05G2628 Ceratophyllum demersum HOM05D004071 ORTHO05D004501 6.4e-38 161.4 131 58.0
SHI25579 Sapria himalayana HOM05D004071 ORTHO05D004501 2.4e-37 159.5 99 72.7
SMO164G0101 Selaginella moellendorffii HOM05D004071 ORTHO05D004501 6.6e-35 151.4 128 56.2
Peaxi162Scf00479g00310 Petunia axillaris HOM05D004071 ORTHO05D004501 1.5e-34 150.2 79 93.7
AagrBONN_evm.TU.Sc2ySwM_117.1813 Anthoceros agrestis HOM05D004071 ORTHO05D004501 4.3e-34 148.7 127 51.2
Gohir.A13G091200 Gossypium hirsutum HOM05D004071 ORTHO05D004501 4.3e-34 148.7 116 67.2
Mapoly0013s0171 Marchantia polymorpha HOM05D004071 ORTHO05D004501 2.8e-33 146.0 129 48.1
AL3G11710 Arabidopsis lyrata HOM05D004071 ORTHO05D004501 3.4e-31 139.0 84 78.6
Pp3c7_9290 Physcomitrium patens HOM05D004071 ORTHO05D004501 1.7e-30 136.7 127 48.0
BolC5t35082H Brassica oleracea HOM05D004071 ORTHO05D007018 6.4e-30 134.8 80 78.8
Gohir.A03G111050 Gossypium hirsutum HOM05D004071 ORTHO05D004501 2.7e-28 129.4 80 76.2
PGR004G2426 Punica granatum HOM05D004071 ORTHO05D004501 7.8e-28 127.9 76 84.2
TAR371G1199 Trochodendron aralioides HOM05D004071 ORTHO05D004501 1.3e-27 127.1 86 72.1
Glyma.19G043700 Glycine max HOM05D004071 ORTHO05D004501 1.9e-26 123.2 77 77.9
Solyc02g089780.3 Solanum lycopersicum HOM05D004071 ORTHO05D004501 1.4e-24 117.1 63 84.1
Lj7A9T84 Lonicera japonica HOM05D004071 ORTHO05D004501 9.9e-23 110.9 66 86.4
A05p45210 Brassica napus HOM05D002308 ORTHO05D007018 3.2e-21 105.9 73 69.9
C09p75710 Brassica napus HOM05D002308 ORTHO05D002535 3.2e-21 105.9 73 69.9
ATR0730G004 Amborella trichopoda HOM05D004071 ORTHO05D004501 5.1e-19 98.6 66 68.2
Gohir.A10G225466 Gossypium hirsutum HOM05D004071 ORTHO05D004501 1.3e-17 94.0 54 83.3
unitig_52.g17623 Utricularia gibba HOM05D004071 ORTHO05D004501 2.3e-11 73.2 41 80.5
CBR_g39496 Chara braunii HOM05D004071 ORTHO05D004501 6.9e-08 61.6 63 38.1
BcaC02g08620 Brassica carinata HOM05D004071 ORTHO05D004501 1.2e-07 60.8 45 64.4
Cre02.g099650 Chlamydomonas reinhardtii HOM05D004071 ORTHO05D004501 2.6e-07 59.7 123 27.6


User provided reference genes

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