Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003161g0010 Nicotiana tabacum HOM05D005714 ORTHO05D006812 5.1e-169 597.8 335 100.0
Nitab4.5_0000612g0140 Nicotiana tabacum HOM05D005714 ORTHO05D006812 1.1e-163 580.1 335 93.7
Peaxi162Scf00479g00037 Petunia axillaris HOM05D005714 ORTHO05D006812 2.6e-149 532.3 336 86.3
PGSC0003DMG400018763 Solanum tuberosum HOM05D005714 ORTHO05D006812 2.5e-144 515.8 336 81.8
CAN.G551.30 Capsicum annuum HOM05D005714 ORTHO05D006812 3.3e-128 462.2 336 78.0
Lj7A8G44 Lonicera japonica HOM05D005714 ORTHO05D006812 3.6e-114 415.6 342 69.3
Dinv33913 Davidia involucrata HOM05D005714 ORTHO05D006812 4.7e-114 415.2 345 68.4
Oeu032870.1 Olea europaea HOM05D005714 ORTHO05D006812 1.4e-110 403.7 345 66.1
Actinidia36301 Actinidia chinensis HOM05D005714 ORTHO05D006812 1.8e-110 403.3 338 67.5
CiPaw.03G006400 Carya illinoinensis HOM05D005714 ORTHO05D006812 3.2e-107 392.5 346 65.3
Cc07_g04960 Coffea canephora HOM05D005714 ORTHO05D006812 5.5e-107 391.7 343 66.8
Cfa007977 Carpinus fangiana HOM05D001801 ORTHO05D001739 6.1e-106 388.3 346 65.3
CSS0016024 Camellia sinensis var. sinensis HOM05D005714 ORTHO05D006812 8.0e-106 387.9 345 65.8
CSS0020756 Camellia sinensis var. sinensis HOM05D005714 ORTHO05D006812 1.8e-105 386.7 345 65.8
COL.COLO4_03920 Corchorus olitorius HOM05D005714 ORTHO05D006812 8.8e-105 384.4 340 64.7
FvH4_6g45610 Fragaria vesca HOM05D005714 ORTHO05D006812 4.4e-104 382.1 341 64.5
Thecc.04G144400 Theobroma cacao HOM05D005714 ORTHO05D006812 7.5e-104 381.3 344 63.7
RcHm_v2.0_Chr2g0163761 Rosa chinensis HOM05D005714 ORTHO05D006812 1.3e-103 380.6 341 63.6
Prupe.3G242300 Prunus persica HOM05D005714 ORTHO05D006812 6.3e-103 378.3 341 64.5
MSTRG.2945 Avicennia marina HOM05D005714 ORTHO05D006812 8.3e-103 377.9 343 63.6
MD09G1081200 Malus domestica HOM05D005714 ORTHO05D006812 3.1e-102 375.9 341 65.1
Rhsim10G0064900 Rhododendron simsii HOM05D005714 ORTHO05D006812 9.1e-102 374.4 356 63.2
Gorai.007G187100 Gossypium raimondii HOM05D005714 ORTHO05D006812 2.9e-100 369.4 345 63.8
Gohir.D11G174600 Gossypium hirsutum HOM05D005714 ORTHO05D006812 5.0e-100 368.6 345 63.8
Migut.H00540 Erythranthe guttata HOM05D005714 ORTHO05D006812 6.5e-100 368.2 346 61.0
Cpa.g.sc179.47 Carica papaya HOM05D005714 ORTHO05D006812 1.6e-98 363.6 345 62.9
Manes.02G065100 Manihot esculenta HOM05D005714 ORTHO05D006812 4.7e-98 362.1 340 63.5
GSVIVG01036468001 Vitis vinifera HOM05D005714 ORTHO05D006812 8.0e-98 361.3 340 62.1
Duzib138G1804 Durio zibethinus HOM05D005714 ORTHO05D006812 1.0e-97 360.9 340 61.5
MD17G1072600 Malus domestica HOM05D005714 ORTHO05D006812 1.4e-97 360.5 341 62.8
Atru.BG.225.p Acer truncatum HOM05D005714 ORTHO05D006812 2.3e-97 359.8 341 61.6
SGA_v2.0_scaffold204G41660 Striga asiatica HOM05D005714 ORTHO05D006812 2.3e-97 359.8 344 60.8
CANSAT64G2721 Cannabis sativa HOM05D005714 ORTHO05D006812 3.0e-97 359.4 344 59.0
THA.LOC104802994 Tarenaya hassleriana HOM05D005714 ORTHO05D006812 4.0e-97 359.0 344 62.2
ECA232G3066 Erigeron canadensis HOM05D005714 ORTHO05D006812 2.0e-96 356.7 337 60.5
SalBow1G2935 Salvia bowleyana HOM05D005714 ORTHO05D006812 2.0e-96 356.7 347 62.0
SalBow1G3421 Salvia bowleyana HOM05D005714 ORTHO05D006812 4.4e-96 355.5 347 61.7
Eucgr.J01456 Eucalyptus grandis HOM05D005714 ORTHO05D006812 9.8e-96 354.4 345 58.3
Potri.017G110300 Populus trichocarpa HOM05D005714 ORTHO05D006812 9.8e-96 354.4 341 61.0
MBI15_g36941_MAGBIO Magnolia biondii HOM05D005714 ORTHO05D006812 6.3e-95 351.7 341 58.9
PGR042G2576 Punica granatum HOM05D005714 ORTHO05D006812 2.4e-94 349.7 343 59.8
Sabra17G0092200 Salix brachista HOM05D005714 ORTHO05D006812 5.4e-94 348.6 341 60.1
Nn3g17645 Nelumbo nucifera HOM05D005714 ORTHO05D006812 9.2e-94 347.8 350 58.9
Sed0016830 Sechium edule HOM05D005714 ORTHO05D006812 1.7e-92 343.6 343 59.2
HanXRQChr15g0490211 Helianthus annuus HOM05D005714 ORTHO05D006812 5.0e-92 342.0 339 59.0
PSO063G3590 Papaver somniferum HOM05D005714 ORTHO05D006812 5.0e-92 342.0 344 59.9
MELO3C023776.2 Cucumis melo HOM05D005714 ORTHO05D006812 6.6e-92 341.7 349 57.6
QL02p053457 Quercus lobata HOM05D005714 ORTHO05D006812 3.3e-91 339.3 346 60.4
Aqoxy3G03832 Aquilegia oxysepala HOM05D005714 ORTHO05D006812 4.3e-91 339.0 349 59.3
CARHR197420 Cardamine hirsuta HOM05D005714 ORTHO05D006812 5.6e-91 338.6 344 59.0
CSS0044543 Camellia sinensis var. sinensis HOM05D005714 ORTHO05D006812 7.3e-91 338.2 344 59.3
CSS0047938 Camellia sinensis var. sinensis HOM05D005714 ORTHO05D006812 7.3e-91 338.2 344 59.3
Sp6g28230 Schrenkiella parvula HOM05D005714 ORTHO05D006812 7.3e-91 338.2 346 59.8
AT5G15880 Arabidopsis thaliana HOM05D005714 ORTHO05D006812 1.2e-90 337.4 344 58.7
Carub.0006s1407 Capsella rubella HOM05D005714 ORTHO05D006812 2.1e-90 336.7 344 58.7
CsaV3_3G020470 Cucumis sativus L. HOM05D005714 ORTHO05D006812 2.1e-90 336.7 344 58.1
Aa31LG11G13710 Aethionema arabicum HOM05D005714 ORTHO05D006812 8.0e-90 334.7 344 59.0
Potri.004G105400 Populus trichocarpa HOM05D005714 ORTHO05D006812 8.0e-90 334.7 341 59.5
Thhalv10015850m.g Eutrema salsugineum HOM05D005714 ORTHO05D006812 1.4e-89 334.0 346 58.4
EL10Ac2g04627 Beta vulgaris HOM05D005714 ORTHO05D006812 1.8e-89 333.6 342 57.6
C03p08510 Brassica napus HOM05D005714 ORTHO05D006812 1.8e-89 333.6 340 58.5
BolC3t13356H Brassica oleracea HOM05D005714 ORTHO05D006812 3.0e-89 332.8 340 58.2
Medtr6g016870 Medicago truncatula HOM05D005714 ORTHO05D006812 3.0e-89 332.8 346 56.1
BraA03t10072Z Brassica rapa HOM05D005714 ORTHO05D006812 1.5e-88 330.5 345 57.4
ClCG05G011990 Citrullus lanatus HOM05D005714 ORTHO05D006812 3.4e-88 329.3 359 55.7
BcaB08g36870 Brassica carinata HOM05D005714 ORTHO05D006812 5.7e-88 328.6 344 58.7
vmacro05584 Vaccinium macrocarpon HOM05D005714 ORTHO05D006812 5.7e-88 328.6 398 54.0
Lalb_Chr21g0317991 Lupinus albus HOM05D005714 ORTHO05D006812 9.8e-88 327.8 345 56.5
A03p07460 Brassica napus HOM05D005714 ORTHO05D006812 1.3e-87 327.4 345 56.8
Sc10g0001430 Simmondsia chinensis HOM05D005714 ORTHO05D006812 1.7e-87 327.0 341 57.8
BraA03t10075Z Brassica rapa HOM05D005714 ORTHO05D006812 3.7e-87 325.9 345 57.1
FAN09G3422 Fragaria x ananassa HOM05D005714 ORTHO05D006812 8.3e-87 324.7 341 58.1
AL6G26770 Arabidopsis lyrata HOM05D005714 ORTHO05D006812 2.4e-86 323.2 344 57.8
AL6G26782 Arabidopsis lyrata HOM05D005714 ORTHO05D006812 2.4e-86 323.2 344 57.8
Ca_20731_v3 Cicer arietinum L. HOM05D005714 ORTHO05D006812 2.4e-86 323.2 346 55.8
PSO782G2399 Papaver somniferum HOM05D005714 ORTHO05D006812 2.4e-86 323.2 338 58.3
BraA10t44382Z Brassica rapa HOM05D005714 ORTHO05D006812 2.0e-85 320.1 343 57.4
C03p08640 Brassica napus HOM05D005714 ORTHO05D006812 4.6e-85 318.9 343 57.1
BolC3t13366H Brassica oleracea HOM05D005714 ORTHO05D006812 4.6e-85 318.9 343 57.1
Phvul.004G049100 Phaseolus vulgaris HOM05D005714 ORTHO05D006812 4.6e-85 318.9 339 57.2
TWI74G1644 Tripterygium wilfordii HOM05D005714 ORTHO05D006812 5.9e-85 318.5 349 57.6
Lsat_1_v5_gn_4_175801 Lactuca sativa HOM05D005714 ORTHO05D006812 2.3e-84 316.6 345 56.8
Ah.10g037360 Amaranthus hybridus HOM05D005714 ORTHO05D006812 1.5e-83 313.9 343 54.5
TPR.G9671 Trifolium pratense HOM05D005714 ORTHO05D006812 4.3e-83 312.4 347 53.6
Sabra04G0076700 Salix brachista HOM05D005714 ORTHO05D006812 4.0e-81 305.8 411 46.0
Hund16108 Selenicereus undatus HOM05D005714 ORTHO05D006812 6.8e-81 305.1 354 54.0
BolC9t58957H Brassica oleracea HOM05D005714 ORTHO05D006812 1.5e-80 303.9 347 55.6
arahy.Tifrunner.gnm1.ann1.AEQW57 Arachis hypogaea HOM05D005714 ORTHO05D006812 7.5e-80 301.6 341 54.0
Lj2g0024465 Lotus japonicus HOM05D005714 ORTHO05D006812 2.4e-78 296.6 335 57.6
Solyc03g046260.2 Solanum lycopersicum HOM05D005714 ORTHO05D006812 3.2e-78 296.2 227 73.1
BcaB01g05015 Brassica carinata HOM05D005714 ORTHO05D006812 3.5e-77 292.7 339 54.9
Ciclev10012317m.g Citrus clementina HOM05D005714 ORTHO05D006812 4.6e-77 292.4 299 58.9
HPP92_027404 Vanilla planifolia HOM05D005714 ORTHO05D006812 8.6e-76 288.1 342 52.0
arahy.Tifrunner.gnm1.ann1.R8VTVZ Arachis hypogaea HOM05D005714 ORTHO05D006812 3.3e-75 286.2 363 50.4
CDE02G2817 Ceratophyllum demersum HOM05D005714 ORTHO05D006812 6.2e-74 282.0 372 49.2
Gohir.A11G168300 Gossypium hirsutum HOM05D005714 ORTHO05D006812 7.5e-72 275.0 252 64.3
Os09g0108400 Oryza sativa ssp. japonica HOM05D005714 ORTHO05D006812 6.4e-71 271.9 338 50.3
Actinidia18116 Actinidia chinensis HOM05D005714 ORTHO05D006812 6.0e-69 265.4 343 51.9
unitig_899.g15126 Utricularia gibba HOM05D005714 ORTHO05D006812 3.1e-65 253.1 341 47.5
Zm00001eb208920 Zea mays HOM05D005714 ORTHO05D006812 1.7e-60 237.3 330 51.5
Psat1g062640 Pisum sativum HOM05D005714 ORTHO05D006812 6.9e-57 225.3 234 56.8
VMungo0464G1377 Vigna mungo HOM05D005714 ORTHO05D006812 2.8e-50 203.4 229 55.5
FAN05G0119 Fragaria x ananassa HOM05D005714 ORTHO05D006812 1.4e-49 201.1 201 59.2
Cfa007975 Carpinus fangiana HOM05D005714 ORTHO05D006812 3.1e-49 199.9 332 42.8
RcHm_v2.0_Chr2g0163701 Rosa chinensis HOM05D005714 ORTHO05D006812 1.2e-48 198.0 140 74.3
TAR622G1272 Trochodendron aralioides HOM05D005714 ORTHO05D006812 5.8e-48 195.7 197 57.9
Glyma.19G041200 Glycine max HOM05D005714 ORTHO05D006812 5.1e-44 182.6 158 64.6
Sopen03g009720 Solanum pennellii HOM05D005714 ORTHO05D006812 1.4e-41 174.5 96 89.6
AagrBONN_evm.TU.Sc2ySwM_344.4539 Anthoceros agrestis HOM05D005714 ORTHO05D006812 1.3e-39 167.9 299 37.8
Pp3c1_6350 Physcomitrium patens HOM05D005714 ORTHO05D006812 1.6e-37 161.0 372 36.6
ATR0752G125 Amborella trichopoda HOM05D005714 ORTHO05D006812 4.6e-37 159.5 134 68.7
SMO139G0044 Selaginella moellendorffii HOM05D005714 ORTHO05D006812 5.8e-32 142.5 286 40.2
AUR62014554 Chenopodium quinoa HOM05D005714 ORTHO05D006812 7.6e-32 142.1 232 45.3
C09p61160 Brassica napus HOM05D005714 ORTHO05D006812 2.9e-31 140.2 117 67.5
AUR62008947 Chenopodium quinoa HOM05D005714 ORTHO05D006812 8.4e-31 138.7 234 44.0
MD17G1072400 Malus domestica HOM05D005714 ORTHO05D006812 7.9e-29 132.1 203 47.8
A10p17320 Brassica napus HOM05D000327 ORTHO05D006812 4.8e-26 122.9 220 42.7
ATR0752G036 Amborella trichopoda HOM05D005714 ORTHO05D006812 1.8e-25 120.9 187 43.3
Mapoly0066s0019 Marchantia polymorpha HOM05D005714 ORTHO05D006812 5.3e-25 119.4 359 31.2
SMO145G0024 Selaginella moellendorffii HOM05D005714 ORTHO05D006812 4.6e-21 106.3 291 34.7
Medtr3g067495 Medicago truncatula HOM05D005714 ORTHO05D006812 7.9e-21 105.5 94 59.6
RcHm_v2.0_Chr2g0163721 Rosa chinensis HOM05D005714 ORTHO05D006812 7.9e-21 105.5 71 74.6
BcaC04g18926 Brassica carinata HOM05D005714 ORTHO05D006812 4.1e-17 93.2 313 30.7
RcHm_v2.0_Chr2g0163711 Rosa chinensis HOM05D005714 ORTHO05D006812 2.0e-16 90.9 79 64.6
C09p61150 Brassica napus HOM05D005714 ORTHO05D006812 2.2e-15 87.4 94 53.2
Sopen03g009730 Solanum pennellii HOM05D005714 ORTHO05D006812 5.0e-15 86.3 84 59.5
SEGI_16525 Sequoiadendron giganteum HOM05D005714 ORTHO05D006812 9.4e-14 82.0 97 46.4
SEGI_18448 Sequoiadendron giganteum HOM05D005714 ORTHO05D006812 5.7e-11 72.8 174 33.9
SGA_v2.0_scaffold254G45250 Striga asiatica HOM05D005714 ORTHO05D051379 5.7e-11 72.8 46 82.6
RcHm_v2.0_Chr2g0163621 Rosa chinensis HOM05D005714 ORTHO05D006812 1.3e-10 71.6 76 55.3
BcaB07g33635 Brassica carinata HOM05D005714 ORTHO05D006812 4.1e-09 66.6 116 41.4


User provided reference genes

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