Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003160g0040 Nicotiana tabacum HOM05D009415 ORTHO05D283833 6.8e-72 273.9 135 100.0
Nitab4.5_0000300g0050 Nicotiana tabacum HOM05D009415 ORTHO05D016356 2.6e-63 245.4 134 88.8
Nitab4.5_0002137g0100 Nicotiana tabacum HOM05D009415 ORTHO05D284878 4.4e-63 244.6 134 90.3
Nitab4.5_0000362g0120 Nicotiana tabacum HOM05D009415 ORTHO05D285732 6.9e-24 114.4 123 48.8
Nitab4.5_0001534g0060 Nicotiana tabacum HOM05D016109 ORTHO05D010293 3.8e-22 108.6 126 48.4
Nitab4.5_0003760g0010 Nicotiana tabacum HOM05D026919 ORTHO05D283457 1.9e-21 106.3 117 50.4
Nitab4.5_0000929g0110 Nicotiana tabacum HOM05D009415 ORTHO05D016356 1.2e-20 103.6 145 42.1
Nitab4.5_0009529g0020 Nicotiana tabacum HOM05D016109 ORTHO05D010293 1.6e-20 103.2 126 46.8
Nitab4.5_0001929g0020 Nicotiana tabacum HOM05D009415 ORTHO05D002780 6.0e-20 101.3 105 50.5
Nitab4.5_0000535g0180 Nicotiana tabacum HOM05D009415 ORTHO05D016356 1.0e-19 100.5 134 42.5
Nitab4.5_0000339g0160 Nicotiana tabacum HOM05D009415 ORTHO05D002780 7.4e-18 94.4 126 46.0
Nitab4.5_0007409g0040 Nicotiana tabacum HOM05D009415 ORTHO05D282465 2.2e-14 82.8 116 44.0
Nitab4.5_0005909g0010 Nicotiana tabacum HOM05D009415 ORTHO05D282952 7.9e-12 74.3 82 50.0
Nitab4.5_0025410g0010 Nicotiana tabacum HOM05D009415 ORTHO05D285015 2.3e-11 72.8 126 36.5
Nitab4.5_0003315g0050 Nicotiana tabacum HOM05D009415 ORTHO05D016356 5.6e-10 68.2 86 41.9
Nitab4.5_0001357g0150 Nicotiana tabacum HOM05D026919 ORTHO05D282273 1.8e-08 63.2 67 47.8
Gohir.D01G166300 Gossypium hirsutum HOM05D000564 ORTHO05D002780 2.6e-07 59.3 141 31.9
Gorai.002G206800 Gossypium raimondii HOM05D000564 ORTHO05D002780 2.6e-07 59.3 141 31.9
Gohir.A01G175200 Gossypium hirsutum HOM05D000564 ORTHO05D002780 5.8e-07 58.2 141 31.2
PGSC0003DMG400018988 Solanum tuberosum HOM05D014085 ORTHO05D051097 1.0e-06 57.4 135 29.6
CAN.G474.14 Capsicum annuum HOM05D012638 ORTHO05D002272 2.2e-06 56.2 62 43.5
Potri.005G251800 Populus trichocarpa HOM05D000564 ORTHO05D002780 2.9e-06 55.8 141 30.5
Sabra05G0195100 Salix brachista HOM05D000564 ORTHO05D002780 2.9e-06 55.8 141 30.5


User provided reference genes

Program Settings