Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003157g0020 Nicotiana tabacum HOM05D006424 ORTHO05D007945 4.8e-154 547.7 266 100.0
Nitab4.5_0009497g0010 Nicotiana tabacum HOM05D006424 ORTHO05D007945 3.7e-146 521.5 278 91.4
PGSC0003DMG402028626 Solanum tuberosum HOM05D006424 ORTHO05D007945 3.0e-132 475.3 278 81.7
Sopen12g021950 Solanum pennellii HOM05D006424 ORTHO05D007945 2.6e-131 472.2 278 82.0
Solyc12g042770.3 Solanum lycopersicum HOM05D006424 ORTHO05D007945 3.7e-130 468.4 278 81.7
Peaxi162Scf00034g01413 Petunia axillaris HOM05D006424 ORTHO05D007945 1.2e-125 453.4 286 80.4
Actinidia08796 Actinidia chinensis HOM05D006424 ORTHO05D007945 8.5e-111 404.1 283 70.7
Actinidia15982 Actinidia chinensis HOM05D006424 ORTHO05D007945 2.6e-107 392.5 283 67.8
Cc04_g04390 Coffea canephora HOM05D006424 ORTHO05D007945 2.6e-107 392.5 288 67.4
GSVIVG01017340001 Vitis vinifera HOM05D006424 ORTHO05D007945 1.3e-106 390.2 274 68.2
Oeu039429.1 Olea europaea HOM05D006424 ORTHO05D007945 1.1e-105 387.1 247 74.9
MSTRG.22746 Avicennia marina HOM05D006424 ORTHO05D007945 1.4e-105 386.7 278 68.3
Cpa.g.sc10.267 Carica papaya HOM05D006424 ORTHO05D007945 2.0e-104 382.9 281 66.9
CSS0015595 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 2.7e-104 382.5 277 68.6
CiPaw.02G157300 Carya illinoinensis HOM05D006424 ORTHO05D007945 3.5e-104 382.1 272 67.3
QL05p029818 Quercus lobata HOM05D006424 ORTHO05D007945 1.3e-103 380.2 282 65.2
TAR383G1051 Trochodendron aralioides HOM05D006424 ORTHO05D007945 3.8e-103 378.6 283 66.8
CiPaw.01G248200 Carya illinoinensis HOM05D006424 ORTHO05D007945 1.5e-102 376.7 276 64.9
Manes.04G112700 Manihot esculenta HOM05D006424 ORTHO05D007945 1.9e-102 376.3 280 66.8
Cfa001961 Carpinus fangiana HOM05D006424 ORTHO05D007945 3.3e-102 375.6 281 63.0
Hma1.2p1_0042F.1_g025600 Hydrangea macrophylla HOM05D006424 ORTHO05D007945 5.6e-102 374.8 285 66.0
HanXRQChr04g0097881 Helianthus annuus HOM05D006424 ORTHO05D007945 7.3e-102 374.4 273 67.0
Eucgr.F03876 Eucalyptus grandis HOM05D006424 ORTHO05D007945 9.5e-102 374.0 279 65.6
Lj9A500T81 Lonicera japonica HOM05D006424 ORTHO05D007945 1.2e-101 373.6 246 70.7
Manes.11G056800 Manihot esculenta HOM05D006424 ORTHO05D007945 1.6e-101 373.2 272 66.5
CAN.G47.13 Capsicum annuum HOM05D006424 ORTHO05D007945 2.1e-101 372.9 207 83.6
Potri.001G204300 Populus trichocarpa HOM05D006424 ORTHO05D007945 4.7e-101 371.7 276 64.9
Thecc.06G024200 Theobroma cacao HOM05D006424 ORTHO05D007945 6.1e-101 371.3 283 65.7
COL.COLO4_11949 Corchorus olitorius HOM05D006424 ORTHO05D007945 8.0e-101 370.9 277 66.4
Haze_16559 Corylus avellana HOM05D006424 ORTHO05D007945 8.0e-101 370.9 297 61.3
Migut.I00764 Erythranthe guttata HOM05D006424 ORTHO05D007945 1.0e-100 370.5 281 64.8
Prupe.3G087300 Prunus persica HOM05D006424 ORTHO05D007945 1.8e-100 369.8 283 64.3
Duzib192G0907 Durio zibethinus HOM05D006424 ORTHO05D007945 2.6e-99 365.9 270 67.8
Gohir.A06G185600 Gossypium hirsutum HOM05D006424 ORTHO05D007945 5.7e-99 364.8 249 69.1
PGR102G1391 Punica granatum HOM05D006424 ORTHO05D007945 7.5e-99 364.4 280 62.9
Ciclev10026222m.g Citrus clementina HOM05D006424 ORTHO05D007945 9.8e-99 364.0 284 61.3
ECA247G2617 Erigeron canadensis HOM05D006424 ORTHO05D007945 9.8e-99 364.0 273 64.8
MD17G1212100 Malus domestica HOM05D006424 ORTHO05D007945 1.3e-98 363.6 277 63.5
Nn2g12084 Nelumbo nucifera HOM05D006424 ORTHO05D007945 1.3e-98 363.6 275 65.5
VMungo0331G1912 Vigna mungo HOM05D006424 ORTHO05D007945 1.3e-98 363.6 275 64.7
arahy.Tifrunner.gnm1.ann1.92ZGJC Arachis hypogaea HOM05D006424 ORTHO05D007945 1.7e-98 363.2 264 65.5
AUR62016338 Chenopodium quinoa HOM05D006424 ORTHO05D007945 2.9e-98 362.5 282 64.2
unitig_27.g24949 Utricularia gibba HOM05D006424 ORTHO05D007945 2.9e-98 362.5 270 65.6
Ca_20445_v3 Cicer arietinum L. HOM05D006424 ORTHO05D007945 4.9e-98 361.7 280 62.9
Gorai.010G225400 Gossypium raimondii HOM05D006424 ORTHO05D007945 6.4e-98 361.3 248 68.5
Lalb_Chr04g0262371 Lupinus albus HOM05D006424 ORTHO05D007945 6.4e-98 361.3 274 62.8
Medtr4g010140 Medicago truncatula HOM05D006424 ORTHO05D007945 8.3e-98 360.9 276 62.0
AUR62011520 Chenopodium quinoa HOM05D006424 ORTHO05D007945 1.1e-97 360.5 283 64.0
Rhsim12G0191200 Rhododendron simsii HOM05D006424 ORTHO05D007945 2.4e-97 359.4 282 62.8
CANSAT56G3050 Cannabis sativa HOM05D006424 ORTHO05D007945 3.2e-97 359.0 273 63.7
PSO210G5365 Papaver somniferum HOM05D006424 ORTHO05D007945 3.2e-97 359.0 279 63.1
Aqoxy7G03662 Aquilegia oxysepala HOM05D006424 ORTHO05D007945 4.1e-97 358.6 261 65.1
MELO3C023426.2 Cucumis melo HOM05D006424 ORTHO05D007945 4.1e-97 358.6 282 62.1
Gohir.D06G192200 Gossypium hirsutum HOM05D006424 ORTHO05D007945 4.1e-97 358.6 275 64.0
Nn8g39504 Nelumbo nucifera HOM05D006424 ORTHO05D007945 4.1e-97 358.6 278 63.3
Phvul.010G156300 Phaseolus vulgaris HOM05D006424 ORTHO05D007945 4.1e-97 358.6 275 62.9
Atru.chr1.2950 Acer truncatum HOM05D006424 ORTHO05D007945 7.0e-97 357.8 282 61.3
RcHm_v2.0_Chr2g0135411 Rosa chinensis HOM05D006424 ORTHO05D007945 1.6e-96 356.7 268 63.8
THA.LOC104810510 Tarenaya hassleriana HOM05D006424 ORTHO05D007945 1.6e-96 356.7 287 63.1
ClCG09G002940 Citrullus lanatus HOM05D006424 ORTHO05D007945 2.7e-96 355.9 287 62.0
PSO210G3245 Papaver somniferum HOM05D006424 ORTHO05D007945 4.6e-96 355.1 272 62.1
Glyma.08G213000 Glycine max HOM05D006424 ORTHO05D007945 5.9e-96 354.8 274 64.2
DCAR_021344 Daucus carota HOM05D006424 ORTHO05D007945 7.8e-96 354.4 282 64.2
CSS0035863 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 1.0e-95 354.0 264 65.9
TPR.G38617 Trifolium pratense HOM05D001630 ORTHO05D007945 1.0e-95 354.0 272 62.1
FAN05G3690 Fragaria x ananassa HOM05D006424 ORTHO05D007945 1.3e-95 353.6 276 62.7
FAN14G0356 Fragaria x ananassa HOM05D006424 ORTHO05D007945 3.9e-95 352.1 264 64.0
Sabra01G0157400 Salix brachista HOM05D006424 ORTHO05D007945 3.9e-95 352.1 279 62.4
CsaV3_7G032330 Cucumis sativus L. HOM05D006424 ORTHO05D007945 8.6e-95 350.9 287 60.3
Lsat_1_v5_gn_1_34401 Lactuca sativa HOM05D006424 ORTHO05D007945 8.6e-95 350.9 298 59.4
Glyma.07G029900 Glycine max HOM05D006424 ORTHO05D007945 1.1e-94 350.5 267 64.8
Lj3g0018478 Lotus japonicus HOM05D006424 ORTHO05D007945 1.1e-94 350.5 274 61.3
FAN02G1519 Fragaria x ananassa HOM05D006424 ORTHO05D007945 1.5e-94 350.1 279 60.9
Sed0012965 Sechium edule HOM05D006424 ORTHO05D007945 1.5e-94 350.1 284 61.6
ATR0322G065 Amborella trichopoda HOM05D006424 ORTHO05D007945 1.2e-93 347.1 250 64.4
MBI04_g29330_MAGBIO Magnolia biondii HOM05D006424 ORTHO05D007945 1.2e-93 347.1 279 62.7
A03p39490 Brassica napus HOM05D006424 ORTHO05D007945 2.8e-93 345.9 279 60.2
CARHR090930 Cardamine hirsuta HOM05D006424 ORTHO05D007945 8.0e-93 344.4 279 59.9
C03p47890 Brassica napus HOM05D006424 ORTHO05D007945 3.1e-92 342.4 279 59.9
Aa31LG8G3030 Aethionema arabicum HOM05D006424 ORTHO05D007945 1.5e-91 340.1 281 59.8
TWI12G0141 Tripterygium wilfordii HOM05D006424 ORTHO05D007945 2.6e-91 339.3 285 61.1
BraA03t13099Z Brassica rapa HOM05D006424 ORTHO05D007945 3.4e-91 339.0 279 59.5
BcaB06g25691 Brassica carinata HOM05D006424 ORTHO05D007945 5.8e-91 338.2 277 59.2
BcaC05g28929 Brassica carinata HOM05D006424 ORTHO05D007945 7.5e-91 337.8 281 59.4
C05p50560 Brassica napus HOM05D006424 ORTHO05D007945 7.5e-91 337.8 281 59.4
A05p33570 Brassica napus HOM05D006424 ORTHO05D007945 1.3e-90 337.0 277 59.2
Carub.0003s1558 Capsella rubella HOM05D006424 ORTHO05D007945 1.3e-90 337.0 283 58.3
AL3G28500 Arabidopsis lyrata HOM05D006424 ORTHO05D007945 2.2e-90 336.3 279 58.8
BolC5t33801H Brassica oleracea HOM05D006424 ORTHO05D007945 2.2e-90 336.3 277 58.8
Thhalv10022443m.g Eutrema salsugineum HOM05D006424 ORTHO05D007945 2.9e-90 335.9 270 60.0
AT3G15840 Arabidopsis thaliana HOM05D006424 ORTHO05D007945 6.4e-90 334.7 279 59.9
Ah.01g020600 Amaranthus hybridus HOM05D006424 ORTHO05D007945 8.3e-90 334.3 207 73.9
BolC3t17067H Brassica oleracea HOM05D006424 ORTHO05D007945 1.9e-89 333.2 296 55.4
Sp3g14150 Schrenkiella parvula HOM05D006424 ORTHO05D007945 3.2e-89 332.4 278 58.6
BcaC01g03854 Brassica carinata HOM05D006424 ORTHO05D007945 9.2e-89 330.9 279 60.6
BraA05t22180Z Brassica rapa HOM05D006424 ORTHO05D007945 1.2e-88 330.5 277 58.5
CDE07G1654 Ceratophyllum demersum HOM05D006424 ORTHO05D007945 1.7e-87 326.6 286 57.7
vmacro16897 Vaccinium macrocarpon HOM05D006424 ORTHO05D007945 1.7e-87 326.6 244 64.3
SalBow2G1302 Salvia bowleyana HOM05D006424 ORTHO05D007945 5.6e-86 321.6 266 62.0
FvH4_6g29710 Fragaria vesca HOM05D006424 ORTHO05D007945 2.0e-83 313.2 196 71.9
FAN09G3401 Fragaria x ananassa HOM05D006424 ORTHO05D007945 2.2e-82 309.7 263 57.8
Os03g0586500 Oryza sativa ssp. japonica HOM05D006424 ORTHO05D007945 7.8e-80 301.2 218 64.7
Zm00001eb049190 Zea mays HOM05D006424 ORTHO05D007945 8.6e-79 297.7 209 67.5
Zm00001eb219530 Zea mays HOM05D006424 ORTHO05D007945 1.8e-76 290.0 279 55.6
Dinv38123 Davidia involucrata HOM05D006424 ORTHO05D007945 1.2e-72 277.3 196 71.9
Mapoly0024s0088 Marchantia polymorpha HOM05D006424 ORTHO05D007945 1.9e-70 270.0 223 54.7
Thecc.06G024600 Theobroma cacao HOM05D006424 ORTHO05D007945 2.4e-68 263.1 192 67.2
Pp3c22_2660 Physcomitrium patens HOM05D006424 ORTHO05D007945 3.1e-68 262.7 241 52.7
Pp3c9_11540 Physcomitrium patens HOM05D006424 ORTHO05D007945 3.4e-67 259.2 229 52.0
AagrBONN_evm.TU.Sc2ySwM_344.5484 Anthoceros agrestis HOM05D006424 ORTHO05D007945 2.3e-63 246.5 263 46.0
CBR_g38381 Chara braunii HOM05D006424 ORTHO05D007945 1.5e-59 233.8 281 45.6
SMO331G0083 Selaginella moellendorffii HOM05D006424 ORTHO05D007945 3.8e-58 229.2 204 49.0
Sed0007474 Sechium edule HOM05D006424 ORTHO05D007945 4.9e-58 228.8 191 59.7
Thecc.K0004600 Theobroma cacao HOM05D006424 ORTHO05D007945 3.5e-56 222.6 146 71.9
Hund06560 Selenicereus undatus HOM05D006424 ORTHO05D007945 2.4e-52 209.9 238 48.3
Psat7g257120 Pisum sativum HOM05D006424 ORTHO05D007945 2.9e-50 203.0 171 58.5
EL10Ac9g21901 Beta vulgaris HOM05D006424 ORTHO05D007945 2.1e-48 196.8 168 60.7
Pp3c15_11500 Physcomitrium patens HOM05D006424 ORTHO05D007945 3.0e-47 193.0 216 45.8
arahy.Tifrunner.gnm1.ann1.7R86JN Arachis hypogaea HOM05D006424 ORTHO05D007945 5.1e-47 192.2 263 43.3
SEGI_16074 Sequoiadendron giganteum HOM05D006424 ORTHO05D007945 3.3e-46 189.5 157 51.6
QL05p029868 Quercus lobata HOM05D006424 ORTHO05D007945 1.7e-42 177.2 150 60.0
Oeu000425.1 Olea europaea HOM05D006424 ORTHO05D007945 8.5e-34 148.3 148 56.1
QL05p029832 Quercus lobata HOM05D006424 ORTHO05D007945 3.2e-25 119.8 69 72.5
arahy.Tifrunner.gnm1.ann1.YP381G Arachis hypogaea HOM05D006424 ORTHO05D007945 1.3e-10 71.2 37 83.8
arahy.Tifrunner.gnm1.ann1.ZYH6JG Arachis hypogaea HOM05D006424 ORTHO05D007945 7.5e-06 55.5 55 52.7


User provided reference genes

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