Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003152g0130 Nicotiana tabacum HOM05D005692 ORTHO05D006953 5.1e-56 220.7 101 100.0
Nitab4.5_0009931g0010 Nicotiana tabacum HOM05D005692 ORTHO05D006953 3.3e-55 218.0 101 99.0
Nitab4.5_0000540g0260 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.6e-54 215.7 101 98.0
PGSC0003DMG400000281 Solanum tuberosum HOM05D005692 ORTHO05D006953 4.8e-54 214.2 101 96.0
Sopen12g003750 Solanum pennellii HOM05D005692 ORTHO05D006953 2.4e-53 211.8 101 94.1
CAN.G1241.20 Capsicum annuum HOM05D005692 ORTHO05D006953 5.3e-53 210.7 101 92.1
Solyc12g008810.2 Solanum lycopersicum HOM05D005692 ORTHO05D006953 1.5e-52 209.1 101 92.1
Peaxi162Scf00015g00716 Petunia axillaris HOM05D005692 ORTHO05D006953 5.8e-52 207.2 99 93.9
Nitab4.5_0003079g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 4.8e-46 187.6 89 96.6
Peaxi162Scf00354g00223 Petunia axillaris HOM05D005692 ORTHO05D006953 8.1e-46 186.8 99 83.8
Migut.J00600 Erythranthe guttata HOM05D005692 ORTHO05D006953 1.4e-45 186.0 97 82.5
Migut.J01065 Erythranthe guttata HOM05D005692 ORTHO05D006953 1.4e-45 186.0 97 82.5
Ah.09g223860 Amaranthus hybridus HOM05D005692 ORTHO05D006953 4.0e-45 184.5 93 86.0
Sc14g0000750 Simmondsia chinensis HOM05D005692 ORTHO05D006953 4.0e-45 184.5 93 87.1
Hund14283 Selenicereus undatus HOM05D005692 ORTHO05D006953 1.5e-44 182.6 94 83.0
vmacro06285 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 3.4e-44 181.4 97 77.3
vmacro23428 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 3.4e-44 181.4 97 77.3
Gorai.005G027900 Gossypium raimondii HOM05D005692 ORTHO05D006953 4.5e-44 181.0 94 83.0
Ah.10g037300 Amaranthus hybridus HOM05D005692 ORTHO05D006953 7.6e-44 180.3 93 84.9
AUR62039390 Chenopodium quinoa HOM05D005692 ORTHO05D006953 7.6e-44 180.3 93 82.8
COL.COLO4_18212 Corchorus olitorius HOM05D005692 ORTHO05D006953 7.6e-44 180.3 99 77.8
ClCG03G015670 Citrullus lanatus HOM05D005692 ORTHO05D006953 1.3e-43 179.5 93 82.8
Oeu039606.1 Olea europaea HOM05D005692 ORTHO05D006953 1.3e-43 179.5 93 84.9
Migut.H00760 Erythranthe guttata HOM05D005692 ORTHO05D006953 2.9e-43 178.3 93 81.7
Glyma.18G151700 Glycine max HOM05D005692 ORTHO05D006953 2.9e-43 178.3 94 83.0
Ca_07409_v3 Cicer arietinum L. HOM05D005692 ORTHO05D006953 4.9e-43 177.6 93 83.9
MELO3C015461.2 Cucumis melo HOM05D005692 ORTHO05D006953 4.9e-43 177.6 93 80.6
Glyma.08G343600 Glycine max HOM05D005692 ORTHO05D006953 4.9e-43 177.6 94 83.0
EL10Ac2g04637 Beta vulgaris HOM05D005692 ORTHO05D006953 6.5e-43 177.2 93 80.6
Migut.H01159 Erythranthe guttata HOM05D005692 ORTHO05D006953 6.5e-43 177.2 97 78.4
Gohir.A02G019200 Gossypium hirsutum HOM05D005692 ORTHO05D006953 6.5e-43 177.2 94 81.9
Gohir.D02G022500 Gossypium hirsutum HOM05D005692 ORTHO05D006953 6.5e-43 177.2 94 81.9
Cc06_g11300 Coffea canephora HOM05D005692 ORTHO05D006953 8.4e-43 176.8 94 81.9
Dinv36757 Davidia involucrata HOM05D005692 ORTHO05D006953 8.4e-43 176.8 94 80.9
CsaV3_1G040340 Cucumis sativus L. HOM05D005692 ORTHO05D006953 1.1e-42 176.4 93 80.6
Duzib151G0847 Durio zibethinus HOM05D005692 ORTHO05D006953 1.1e-42 176.4 94 80.9
MD02G1077000 Malus domestica HOM05D005692 ORTHO05D006953 1.1e-42 176.4 93 83.9
Thecc.09G090700 Theobroma cacao HOM05D005692 ORTHO05D006953 1.4e-42 176.0 94 79.8
arahy.Tifrunner.gnm1.ann1.JM0M9B Arachis hypogaea HOM05D005692 ORTHO05D006953 1.9e-42 175.6 93 81.7
arahy.Tifrunner.gnm1.ann1.VY1HWT Arachis hypogaea HOM05D005692 ORTHO05D006953 1.9e-42 175.6 93 81.7
Psat6g162800 Pisum sativum HOM05D005692 ORTHO05D006953 1.9e-42 175.6 93 81.7
ECA234G3968 Erigeron canadensis HOM05D005692 ORTHO05D006953 3.2e-42 174.9 97 77.3
Phvul.008G136000 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 3.2e-42 174.9 95 80.0
Potri.012G001800 Populus trichocarpa HOM05D005692 ORTHO05D006953 3.2e-42 174.9 92 79.3
Sabra12G0019500 Salix brachista HOM05D005692 ORTHO05D006953 3.2e-42 174.9 92 79.3
Sabra12G0019700 Salix brachista HOM05D005692 ORTHO05D006953 3.2e-42 174.9 92 79.3
Lalb_Chr03g0041061 Lupinus albus HOM05D005692 ORTHO05D006953 4.2e-42 174.5 94 79.8
HanXRQChr10g0319271 Helianthus annuus HOM05D005692 ORTHO05D006953 5.5e-42 174.1 97 77.3
Phvul.005G056600 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 5.5e-42 174.1 95 78.9
SGA_v2.0_scaffold852G53671 Striga asiatica HOM05D005692 ORTHO05D006953 5.5e-42 174.1 93 80.6
TWI34G0948 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 5.5e-42 174.1 91 83.5
DCAR_011984 Daucus carota HOM05D005692 ORTHO05D006953 7.1e-42 173.7 93 76.3
Psat6g183720 Pisum sativum HOM05D005692 ORTHO05D006953 7.1e-42 173.7 93 80.6
MD15G1205700 Malus domestica HOM05D005692 ORTHO05D006953 1.2e-41 172.9 93 82.8
Medtr7g051450 Medicago truncatula HOM05D005692 ORTHO05D006953 1.2e-41 172.9 92 81.5
Nitab4.5_0000095g0140 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.2e-41 172.9 110 72.7
RcHm_v2.0_Chr2g0093151 Rosa chinensis HOM05D005692 ORTHO05D006953 1.2e-41 172.9 93 81.7
Cpa.g.sc20.158 Carica papaya HOM05D005692 ORTHO05D006953 1.6e-41 172.6 94 80.9
FvH4_1g07240 Fragaria vesca HOM05D005692 ORTHO05D006953 1.6e-41 172.6 93 80.6
FAN26G0193 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.6e-41 172.6 93 80.6
Nn8g38892 Nelumbo nucifera HOM05D005692 ORTHO05D006953 2.1e-41 172.2 94 79.8
Rhsim03G0233100 Rhododendron simsii HOM05D005692 ORTHO05D006953 2.1e-41 172.2 96 75.0
SGA_v2.0_scaffold62G21600 Striga asiatica HOM05D005692 ORTHO05D006953 2.7e-41 171.8 93 79.6
Lj1g0023726 Lotus japonicus HOM05D005692 ORTHO05D006953 3.5e-41 171.4 93 80.6
Manes.03G032800 Manihot esculenta HOM05D005692 ORTHO05D006953 3.5e-41 171.4 94 76.6
Phvul.008G136200 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 3.5e-41 171.4 95 78.9
Prupe.7G211400 Prunus persica HOM05D005692 ORTHO05D006953 3.5e-41 171.4 93 78.5
CiPaw.03G217300 Carya illinoinensis HOM05D005692 ORTHO05D006953 4.6e-41 171.0 94 76.6
Nn6g35447 Nelumbo nucifera HOM05D005692 ORTHO05D006953 4.6e-41 171.0 94 79.8
Medtr7g021900 Medicago truncatula HOM05D005692 ORTHO05D006953 6.0e-41 170.6 92 80.4
CSS0005546 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 7.9e-41 170.2 94 77.7
CSS0025569 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 7.9e-41 170.2 94 77.7
Ciclev10010392m.g Citrus clementina HOM05D005692 ORTHO05D006953 7.9e-41 170.2 94 76.6
Psat6g183640 Pisum sativum HOM05D005692 ORTHO05D006953 1.0e-40 169.9 93 79.6
PGR102G3100 Punica granatum HOM05D005692 ORTHO05D006953 1.0e-40 169.9 94 77.7
Cfa003097 Carpinus fangiana HOM05D005692 ORTHO05D006953 1.3e-40 169.5 91 76.9
HanXRQChr12g0354791 Helianthus annuus HOM05D005692 ORTHO05D006953 2.3e-40 168.7 97 74.2
Sed0014309 Sechium edule HOM05D005692 ORTHO05D006953 2.3e-40 168.7 92 78.3
FAN19G2784 Fragaria x ananassa HOM05D005692 ORTHO05D006953 3.0e-40 168.3 93 77.4
Eucgr.C03889 Eucalyptus grandis HOM05D005692 ORTHO05D006953 5.1e-40 167.5 91 80.2
AUR62033506 Chenopodium quinoa HOM05D005692 ORTHO05D006953 8.7e-40 166.8 113 67.3
Atru.BG.21.p Acer truncatum HOM05D005692 ORTHO05D006953 1.1e-39 166.4 89 79.8
FAN23G0510 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.5e-39 166.0 91 79.1
FAN26G1568 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.5e-39 166.0 91 79.1
TAR626G0225 Trochodendron aralioides HOM05D005692 ORTHO05D006953 1.9e-39 165.6 94 76.6
VMungo1383G2743 Vigna mungo HOM05D005692 ORTHO05D006953 1.9e-39 165.6 115 67.8
FAN19G0937 Fragaria x ananassa HOM05D005692 ORTHO05D006953 3.3e-39 164.9 95 76.8
Psat6g183440 Pisum sativum HOM05D005692 ORTHO05D006953 3.3e-39 164.9 93 78.5
unitig_748.g8121 Utricularia gibba HOM05D005692 ORTHO05D006953 4.3e-39 164.5 93 76.3
Duzib187G1084 Durio zibethinus HOM05D005692 ORTHO05D006953 5.7e-39 164.1 94 74.5
Lsat_1_v5_gn_5_145440 Lactuca sativa HOM05D005692 ORTHO05D006953 7.4e-39 163.7 97 72.2
CANSAT78G0210 Cannabis sativa HOM05D005692 ORTHO05D006953 9.6e-39 163.3 93 73.1
Atru.BG.266.p Acer truncatum HOM05D005692 ORTHO05D006953 1.3e-38 162.9 89 78.7
FvH4_1g24820 Fragaria vesca HOM05D005692 ORTHO05D006953 1.3e-38 162.9 93 76.3
SGA_v2.0_scaffold33G13431 Striga asiatica HOM05D005692 ORTHO05D006953 1.3e-38 162.9 97 74.2
HPP92_009139 Vanilla planifolia HOM05D005692 ORTHO05D006953 4.8e-38 161.0 94 73.4
THA.LOC104801884 Tarenaya hassleriana HOM05D005692 ORTHO05D006953 8.2e-38 160.2 91 75.8
GSVIVG01015215001 Vitis vinifera HOM05D005692 ORTHO05D006953 1.4e-37 159.5 96 74.0
Duzib187G0878 Durio zibethinus HOM05D005692 ORTHO05D006953 1.8e-37 159.1 94 74.5
PSO210G0626 Papaver somniferum HOM05D005692 ORTHO05D006953 1.8e-37 159.1 94 72.3
PSO210G2337 Papaver somniferum HOM05D005692 ORTHO05D006953 1.8e-37 159.1 94 72.3
MBI13_g44212_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 2.4e-37 158.7 94 70.2
MBI14_g41836_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 2.4e-37 158.7 94 70.2
TWI32G0831 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 3.1e-37 158.3 91 78.0
Peaxi162Scf00498g00124 Petunia axillaris HOM05D005692 ORTHO05D006953 2.6e-36 155.2 75 94.7
Actinidia29885 Actinidia chinensis HOM05D003753 ORTHO05D005081 4.5e-36 154.5 89 75.3
Aa31LG2G20910 Aethionema arabicum HOM05D005692 ORTHO05D006953 2.9e-35 151.8 91 69.2
BcaC09g51744 Brassica carinata HOM05D005692 ORTHO05D006953 1.9e-34 149.1 91 70.3
CARHR237500 Cardamine hirsuta HOM05D005692 ORTHO05D006953 1.9e-34 149.1 91 70.3
Thhalv10026646m.g Eutrema salsugineum HOM05D005692 ORTHO05D006953 2.5e-34 148.7 91 70.3
AL7G22650 Arabidopsis lyrata HOM05D005692 ORTHO05D006953 3.2e-34 148.3 87 72.4
AT4G29660 Arabidopsis thaliana HOM05D005692 ORTHO05D006953 3.2e-34 148.3 87 72.4
Carub.0007s1086 Capsella rubella HOM05D005692 ORTHO05D006953 3.2e-34 148.3 87 72.4
Aqoxy4G03142 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 5.5e-34 147.5 94 68.1
BcaC09g52211 Brassica carinata HOM05D005692 ORTHO05D006953 5.5e-34 147.5 87 71.3
A01p08470 Brassica napus HOM05D005692 ORTHO05D006953 5.5e-34 147.5 87 71.3
C01p09830 Brassica napus HOM05D005692 ORTHO05D006953 5.5e-34 147.5 87 71.3
BolC1t00945H Brassica oleracea HOM05D005692 ORTHO05D006953 5.5e-34 147.5 87 71.3
BraA01t00794Z Brassica rapa HOM05D005692 ORTHO05D006953 5.5e-34 147.5 87 71.3
SHI00379 Sapria himalayana HOM05D005692 ORTHO05D006953 7.2e-34 147.1 78 76.9
Sp7g27450 Schrenkiella parvula HOM05D005692 ORTHO05D006953 9.3e-34 146.7 87 72.4
ATR0602G199 Amborella trichopoda HOM05D005692 ORTHO05D006953 1.2e-33 146.4 94 69.1
Os05g0540200 Oryza sativa ssp. japonica HOM05D005692 ORTHO05D006953 1.2e-33 146.4 93 67.7
Sp3g29900 Schrenkiella parvula HOM05D005692 ORTHO05D006953 6.1e-33 144.1 87 71.3
Nitab4.5_0004795g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.3e-32 142.9 80 81.2
Nitab4.5_0008958g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.3e-32 142.9 78 83.3
Aqoxy1G00378 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 6.9e-29 130.6 93 61.3
CDE06G0459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 6.5e-27 124.0 74 70.3
TPR.G24304 Trifolium pratense HOM05D005692 ORTHO05D006953 2.7e-25 118.6 66 78.8
SGA_v2.0_scaffold33G13433 Striga asiatica HOM05D000524 ORTHO05D000381 1.8e-24 115.9 61 82.0
SHI21206 Sapria himalayana HOM05D005692 ORTHO05D006953 5.1e-24 114.4 64 71.9
Psat0s10921g0080 Pisum sativum HOM05D005692 ORTHO05D006953 8.8e-24 113.6 61 82.0
FAN19G3189 Fragaria x ananassa HOM05D005692 ORTHO05D006953 2.8e-22 108.6 74 66.2
CDE06G1459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 4.1e-21 104.8 70 67.1
CBR_g36562 Chara braunii HOM05D005692 ORTHO05D006953 2.2e-14 82.4 70 50.0
Mapoly0063s0096 Marchantia polymorpha HOM05D005692 ORTHO05D006953 3.7e-14 81.6 75 48.0
Zm00001eb294300 Zea mays HOM05D005692 ORTHO05D006953 1.8e-13 79.3 61 60.7
Pp3c13_20310 Physcomitrium patens HOM05D005692 ORTHO05D006953 1.1e-07 60.1 57 42.1
Haze_25902 Corylus avellana HOM05D001256 ORTHO05D001141 4.4e-07 58.2 36 58.3


User provided reference genes

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