Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003148g0030 Nicotiana tabacum HOM05D000780 ORTHO05D009033 8.3e-163 577.0 299 100.0
Nitab4.5_0000841g0080 Nicotiana tabacum HOM05D000780 ORTHO05D009033 3.6e-150 535.0 299 94.0
Solyc04g050470.4 Solanum lycopersicum HOM05D000780 ORTHO05D009033 1.4e-117 426.8 309 76.4
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 8.7e-96 354.4 292 66.1
Hma1.2p1_0130F.1_g060510 Hydrangea macrophylla HOM05D000780 ORTHO05D009033 8.7e-96 354.4 298 63.1
Gorai.013G188500 Gossypium raimondii HOM05D000780 ORTHO05D009033 1.1e-95 354.0 310 63.9
Gohir.D13G172200 Gossypium hirsutum HOM05D000780 ORTHO05D009033 2.5e-95 352.8 310 63.5
Thecc.05G266300 Theobroma cacao HOM05D000780 ORTHO05D009033 3.3e-95 352.4 261 69.3
CSS0005756 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 5.7e-95 351.7 301 65.4
Atru.chr2.1117 Acer truncatum HOM05D000780 ORTHO05D009033 9.7e-95 350.9 294 64.3
MSTRG.27431 Avicennia marina HOM05D000780 ORTHO05D009033 1.3e-94 350.5 257 70.4
Gohir.A13G161800 Gossypium hirsutum HOM05D000780 ORTHO05D009033 1.3e-94 350.5 310 62.6
Migut.F02052 Erythranthe guttata HOM05D000780 ORTHO05D009033 1.6e-94 350.1 288 65.6
GSVIVG01026324001 Vitis vinifera HOM05D000780 ORTHO05D009033 2.2e-94 349.7 313 63.6
Glyma.20G221500 Glycine max HOM05D000780 ORTHO05D009033 1.8e-93 346.7 292 63.4
SalBow1G6873 Salvia bowleyana HOM05D000780 ORTHO05D009033 2.4e-93 346.3 282 66.3
Actinidia06831 Actinidia chinensis HOM05D000780 ORTHO05D009033 1.2e-92 344.0 319 61.1
Ciclev10021307m.g Citrus clementina HOM05D000780 ORTHO05D009033 1.3e-91 340.5 274 65.3
QL01p042200 Quercus lobata HOM05D000780 ORTHO05D009033 6.5e-91 338.2 302 63.6
CsaV3_1G045040 Cucumis sativus L. HOM05D000780 ORTHO05D009033 1.1e-90 337.4 258 68.2
VMungo0720G1285 Vigna mungo HOM05D000780 ORTHO05D009033 1.4e-90 337.0 275 64.7
Peaxi162Scf00077g00138 Petunia axillaris HOM05D000780 ORTHO05D009033 2.5e-90 336.3 224 81.7
THA.LOC104821566 Tarenaya hassleriana HOM05D000780 ORTHO05D009033 4.2e-90 335.5 322 59.3
TWI34G1716 Tripterygium wilfordii HOM05D000780 ORTHO05D009033 4.2e-90 335.5 312 60.9
Phvul.L002032 Phaseolus vulgaris HOM05D000780 ORTHO05D009033 5.5e-90 335.1 270 64.4
Ca_09986_v3 Cicer arietinum L. HOM05D000780 ORTHO05D009033 2.1e-89 333.2 296 61.5
Nn1g03021 Nelumbo nucifera HOM05D000780 ORTHO05D009033 6.1e-89 331.6 303 60.7
Ah.06g187930 Amaranthus hybridus HOM05D000780 ORTHO05D009033 2.3e-88 329.7 259 66.0
PGR004G1412 Punica granatum HOM05D000780 ORTHO05D009033 2.3e-88 329.7 309 59.9
Aqoxy5G00106 Aquilegia oxysepala HOM05D000780 ORTHO05D009033 3.9e-88 328.9 305 60.3
Carub.0007s3248 Capsella rubella HOM05D000780 ORTHO05D009033 6.7e-88 328.2 308 59.1
Lsat_1_v5_gn_9_46781 Lactuca sativa HOM05D000780 ORTHO05D009033 6.7e-88 328.2 270 65.6
Medtr1g079763 Medicago truncatula HOM05D000780 ORTHO05D009033 6.7e-88 328.2 300 58.7
Sc24g0002520 Simmondsia chinensis HOM05D000780 ORTHO05D009033 8.8e-88 327.8 267 67.8
Lj5g0019051 Lotus japonicus HOM05D000780 ORTHO05D009033 1.9e-87 326.6 299 60.9
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 1.9e-87 326.6 303 58.7
Potri.019G023700 Populus trichocarpa HOM05D000780 ORTHO05D009033 1.9e-87 326.6 303 59.4
SalBow1G5981 Salvia bowleyana HOM05D000780 ORTHO05D009033 1.9e-87 326.6 312 59.6
MD12G1251900 Malus domestica HOM05D000780 ORTHO05D009033 3.3e-87 325.9 312 60.9
Rhsim05G0170400 Rhododendron simsii HOM05D000780 ORTHO05D009033 5.7e-87 325.1 300 62.7
TAR633G0111 Trochodendron aralioides HOM05D000780 ORTHO05D009033 5.7e-87 325.1 302 60.6
AT5G37360 Arabidopsis thaliana HOM05D000780 ORTHO05D009033 1.3e-86 323.9 311 58.8
AUR62006989 Chenopodium quinoa HOM05D000780 ORTHO05D009033 2.2e-86 323.2 257 65.4
RcHm_v2.0_Chr3g0449091 Rosa chinensis HOM05D000780 ORTHO05D009033 2.2e-86 323.2 287 63.8
arahy.Tifrunner.gnm1.ann1.ZAXM00 Arachis hypogaea HOM05D000780 ORTHO05D009033 2.8e-86 322.8 278 62.2
EL10Ac4g09771 Beta vulgaris HOM05D000780 ORTHO05D009033 2.8e-86 322.8 317 58.0
Hund07171 Selenicereus undatus HOM05D000780 ORTHO05D009033 4.8e-86 322.0 305 58.4
Eucgr.H04210 Eucalyptus grandis HOM05D000780 ORTHO05D009033 6.3e-86 321.6 258 66.7
FvH4_6g01461 Fragaria vesca HOM05D000780 ORTHO05D009033 1.1e-85 320.9 289 62.3
AL7G45990 Arabidopsis lyrata HOM05D000780 ORTHO05D009033 1.8e-85 320.1 310 58.7
arahy.Tifrunner.gnm1.ann1.09X96J Arachis hypogaea HOM05D000780 ORTHO05D009033 1.8e-85 320.1 278 61.5
ClCG03G011490 Citrullus lanatus HOM05D000780 ORTHO05D009033 2.4e-85 319.7 263 65.0
DCAR_030971 Daucus carota HOM05D000780 ORTHO05D009033 1.2e-84 317.4 293 60.8
BcaC02g09559 Brassica carinata HOM05D000780 ORTHO05D009033 1.5e-84 317.0 305 58.7
BolC4t25992H Brassica oleracea HOM05D000780 ORTHO05D009033 1.5e-84 317.0 305 58.7
Sp7g05110 Schrenkiella parvula HOM05D000780 ORTHO05D009033 1.5e-84 317.0 278 61.5
SGA_v2.0_scaffold329G48830 Striga asiatica HOM05D002740 ORTHO05D003126 1.5e-84 317.0 305 59.0
Lalb_Chr21g0311301 Lupinus albus HOM05D000780 ORTHO05D009033 2.0e-84 316.6 273 61.5
C04p44170 Brassica napus HOM05D000780 ORTHO05D009033 2.6e-84 316.2 275 62.2
Thhalv10027857m.g Eutrema salsugineum HOM05D000780 ORTHO05D009033 3.4e-84 315.8 284 59.9
BraA04t16719Z Brassica rapa HOM05D000780 ORTHO05D009033 5.9e-84 315.1 279 61.3
Manes.09G146600 Manihot esculenta HOM05D000780 ORTHO05D009033 5.9e-84 315.1 274 63.9
Aa31LG9G18020 Aethionema arabicum HOM05D000780 ORTHO05D009033 5.0e-83 312.0 293 59.0
A04p10530 Brassica napus HOM05D000780 ORTHO05D009033 6.5e-83 311.6 280 61.1
MBI10_g26046_MAGBIO Magnolia biondii HOM05D000780 ORTHO05D009033 2.5e-82 309.7 280 59.3
vmacro19978 Vaccinium macrocarpon HOM05D000780 ORTHO05D009033 3.2e-82 309.3 340 53.8
ECA232G3479 Erigeron canadensis HOM05D000780 ORTHO05D009033 2.1e-81 306.6 250 64.4
unitig_37.g12284 Utricularia gibba HOM05D000780 ORTHO05D009033 1.4e-80 303.9 258 62.4
CARHR215730 Cardamine hirsuta HOM05D000780 ORTHO05D009033 1.5e-79 300.4 311 56.3
ATR0088G058 Amborella trichopoda HOM05D000780 ORTHO05D009033 9.7e-79 297.7 297 56.2
MELO3C010086.2 Cucumis melo HOM05D000780 ORTHO05D009033 4.8e-78 295.4 229 66.8
PSO210G3904 Papaver somniferum HOM05D000780 ORTHO05D009033 4.8e-78 295.4 273 59.3
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 1.1e-77 294.3 213 70.4
CANSAT54G0520 Cannabis sativa HOM05D000780 ORTHO05D009033 4.1e-77 292.4 263 60.5
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 1.5e-76 290.4 226 66.4
Dinv01155 Davidia involucrata HOM05D000780 ORTHO05D009033 1.5e-76 290.4 211 71.6
Potri.013G050300 Populus trichocarpa HOM05D000780 ORTHO05D009033 1.3e-75 287.3 268 58.2
HanXRQChr05g0145151 Helianthus annuus HOM05D000780 ORTHO05D009033 1.2e-73 280.8 256 59.8
Glyma.10G167600 Glycine max HOM05D000780 ORTHO05D009033 1.6e-73 280.4 293 55.6
Haze_04472 Corylus avellana HOM05D000780 ORTHO05D009033 1.5e-71 273.9 289 59.2
FAN02G1432 Fragaria x ananassa HOM05D000780 ORTHO05D009033 5.7e-71 271.9 283 55.5
TPR.G10273 Trifolium pratense HOM05D000780 ORTHO05D009033 1.3e-70 270.8 263 57.0
FAN05G0905 Fragaria x ananassa HOM05D000780 ORTHO05D001132 2.8e-70 269.6 306 52.9
FAN14G3828 Fragaria x ananassa HOM05D000780 ORTHO05D001132 2.8e-70 269.6 304 53.0
FAN14G4937 Fragaria x ananassa HOM05D000780 ORTHO05D001132 2.8e-70 269.6 307 53.4
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 3.7e-70 269.2 275 56.4
Sabra19G0033700 Salix brachista HOM05D000780 ORTHO05D009033 1.8e-69 266.9 299 53.5
Prupe.6G353000 Prunus persica HOM05D000780 ORTHO05D009033 4.1e-69 265.8 289 55.0
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 7.0e-69 265.0 228 62.7
Os02g0815400 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D009033 1.5e-66 257.3 235 57.4
CSS0024577 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 7.2e-66 255.0 247 60.7
Zm00001eb258750 Zea mays HOM05D000780 ORTHO05D009033 1.4e-64 250.8 257 53.7
Cpa.g.c33516 Carica papaya HOM05D000780 ORTHO05D009033 1.2e-60 237.7 188 64.9
CiPaw.07G074400 Carya illinoinensis HOM05D000780 ORTHO05D009033 1.3e-59 234.2 229 59.4
Eucgr.H04100 Eucalyptus grandis HOM05D000780 ORTHO05D009033 2.9e-59 233.0 222 59.0
Sed0013634 Sechium edule HOM05D000780 ORTHO05D009033 4.8e-54 215.7 271 50.2
Lj2A46G68 Lonicera japonica HOM05D000780 ORTHO05D009033 6.3e-54 215.3 147 74.8
AagrBONN_evm.TU.Sc2ySwM_228.3981 Anthoceros agrestis HOM05D000780 ORTHO05D009033 1.0e-51 208.0 251 45.8
Sopen04g021250 Solanum pennellii HOM05D000780 ORTHO05D009033 3.8e-51 206.1 135 80.7
SMO172G0144 Selaginella moellendorffii HOM05D000780 ORTHO05D009033 1.2e-47 194.5 263 43.7
PGSC0003DMG402028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 3.5e-44 183.0 120 80.8
Pp3c18_1300 Physcomitrium patens HOM05D000780 ORTHO05D009033 5.9e-44 182.2 236 42.8
Cc09_g03030 Coffea canephora HOM05D000780 ORTHO05D009033 9.8e-39 164.9 120 70.8
MD12G1251000 Malus domestica HOM05D000072 ORTHO05D009033 8.3e-38 161.8 191 50.8
CBR_g11120 Chara braunii HOM05D000780 ORTHO05D009033 7.0e-37 158.7 243 38.7
PGSC0003DMG401028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 2.0e-36 157.1 118 74.6
Cc09_g03040 Coffea canephora HOM05D000780 ORTHO05D009033 4.6e-36 156.0 150 56.7
CAN.G4.37 Capsicum annuum HOM05D000780 ORTHO05D009033 7.8e-36 155.2 121 71.1
HPP92_009057 Vanilla planifolia HOM05D000780 ORTHO05D009033 5.6e-34 149.1 121 64.5
HPP92_009056 Vanilla planifolia HOM05D001254 ORTHO05D001386 2.8e-33 146.7 143 53.8
Eucgr.H04102 Eucalyptus grandis HOM05D000780 ORTHO05D009033 1.1e-32 144.8 204 45.6
MD12G1250900 Malus domestica HOM05D000780 ORTHO05D009033 1.2e-31 141.4 151 57.0
FAN09G0636 Fragaria x ananassa HOM05D000780 ORTHO05D001132 2.6e-31 140.2 114 64.0
SEGI_05244 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 5.4e-29 132.5 120 60.8
SEGI_21696 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 2.7e-28 130.2 151 45.7
FAN11G0130 Fragaria x ananassa HOM05D000780 ORTHO05D009033 4.9e-22 109.4 234 36.8
FAN05G5022 Fragaria x ananassa HOM05D000780 ORTHO05D009033 4.0e-16 89.7 98 53.1
FAN14G1321 Fragaria x ananassa HOM05D000780 ORTHO05D009033 6.9e-08 62.4 107 43.0
FvH4_3g18300 Fragaria vesca HOM05D000780 ORTHO05D196851 2.6e-07 60.5 42 69.0
FAN18G1636 Fragaria x ananassa HOM05D000780 ORTHO05D009033 1.7e-06 57.8 60 55.0


User provided reference genes

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