Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003143g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.0e-229 797.0 412 100.0
Nitab4.5_0013986g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.7e-169 598.6 417 77.0
Nitab4.5_0000481g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.5e-157 559.3 416 75.2
Nitab4.5_0004188g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.4e-154 547.7 397 76.6
Nitab4.5_0001976g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.6e-148 528.9 411 72.3
Nitab4.5_0002701g0060 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.0e-103 380.2 306 69.0
Nitab4.5_0003674g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.4e-99 367.5 266 77.8
Nitab4.5_0002397g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 8.9e-99 364.8 217 86.6
Nitab4.5_0000415g0070 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.7e-97 359.4 357 59.9
Nitab4.5_0000004g0300 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.7e-92 342.4 229 78.2
Nitab4.5_0002671g0070 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.9e-73 279.3 395 41.5
Nitab4.5_0007540g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.4e-72 276.9 408 41.9
Nitab4.5_0011017g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.9e-69 267.3 408 40.0
Nitab4.5_0000391g0380 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.6e-68 264.2 417 39.3
Nitab4.5_0005533g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.6e-68 264.2 407 40.5
Nitab4.5_0006184g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.3e-67 259.2 435 38.9
Nitab4.5_0004036g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.9e-65 252.7 409 40.6
Nitab4.5_0005857g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.4e-65 252.3 408 38.7
Nitab4.5_0006406g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.3e-64 248.4 367 40.1
Nitab4.5_0002766g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.3e-61 240.0 396 39.4
Nitab4.5_0000423g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.1e-60 237.3 392 38.3
Nitab4.5_0005584g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.8e-60 236.1 403 38.0
Nitab4.5_0006237g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.5e-58 231.1 349 40.7
Nitab4.5_0005719g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.8e-58 229.2 403 37.0
Nitab4.5_0000232g0170 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.2e-56 223.0 370 38.4
Peaxi162Scf00466g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 9.3e-56 221.9 427 36.1
Nitab4.5_0022233g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.1e-55 220.7 247 47.0
PGSC0003DMG400015099 Solanum tuberosum HOM05D000995 ORTHO05D007165 5.1e-54 216.1 407 37.1
Peaxi162Scf00658g00027 Petunia axillaris HOM05D003617 ORTHO05D007165 1.5e-53 214.5 410 35.6
Nitab4.5_0005517g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.1e-51 206.8 403 35.7
Nitab4.5_0000836g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.9e-51 205.7 408 34.3
PGSC0003DMG400008666 Solanum tuberosum HOM05D003617 ORTHO05D007165 6.9e-51 205.7 401 36.9
Peaxi162Scf00104g00615 Petunia axillaris HOM05D003617 ORTHO05D007165 9.0e-51 205.3 410 34.4
Nitab4.5_0003674g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.6e-50 202.2 128 83.6
Nitab4.5_0001081g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.0e-49 201.8 408 34.8
Peaxi162Scf00963g00001 Petunia axillaris HOM05D003617 ORTHO05D007165 1.3e-49 201.4 373 37.0
Nitab4.5_0004315g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.2e-48 196.8 349 38.1
Peaxi162Scf00108g00186 Petunia axillaris HOM05D003617 ORTHO05D007165 1.6e-47 194.5 413 35.6
Nitab4.5_0004939g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.1e-47 192.6 135 74.8
Nitab4.5_0008204g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.2e-44 184.1 366 35.5
Nitab4.5_0003882g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.8e-44 183.0 320 35.9
Nitab4.5_0000419g0110 Nicotiana tabacum HOM05D003617 ORTHO05D007165 8.2e-44 182.2 410 33.2
Nitab4.5_0000040g0540 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.1e-43 179.9 367 34.6
Nitab4.5_0007804g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.1e-43 179.9 360 35.8
Peaxi162Scf00337g00075 Petunia axillaris HOM05D003617 ORTHO05D007165 2.0e-42 177.6 253 40.3
Peaxi162Scf01543g00014 Petunia axillaris HOM05D003617 ORTHO05D007165 2.6e-42 177.2 250 40.8
Peaxi162Scf00148g00142 Petunia axillaris HOM05D003617 ORTHO05D007165 8.5e-41 172.2 370 33.8
Peaxi162Scf00883g00081 Petunia axillaris HOM05D003617 ORTHO05D007165 8.5e-41 172.2 370 33.8
Nitab4.5_0018035g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.1e-40 171.8 118 81.4
Nitab4.5_0002555g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.9e-40 171.0 313 35.8
Nitab4.5_0000336g0140 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.2e-40 169.9 178 56.2
Sopen10g018400 Solanum pennellii HOM05D003617 ORTHO05D007165 7.2e-40 169.1 398 35.9
PGSC0003DMG400038662 Solanum tuberosum HOM05D003617 ORTHO05D007165 9.4e-40 168.7 298 37.2
Peaxi162Scf00321g00053 Petunia axillaris HOM05D003617 ORTHO05D007165 6.1e-39 166.0 427 32.3
Nitab4.5_0000300g0220 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.9e-39 165.6 207 44.4
Nitab4.5_0000623g0130 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.0e-38 165.2 157 61.1
Nitab4.5_0000045g0130 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.4e-38 164.9 359 32.6
Nitab4.5_0002289g0150 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.3e-37 160.2 347 33.1
Nitab4.5_0000109g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.3e-36 156.0 128 62.5
Sopen12g027070 Solanum pennellii HOM05D003617 ORTHO05D007165 6.3e-36 156.0 402 35.1
Nitab4.5_0001586g0180 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.4e-35 154.8 303 34.0
Sopen12g019440 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-35 154.8 335 35.8
PGSC0003DMG400038881 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.4e-35 154.8 165 52.1
Sopen00g013880 Solanum pennellii HOM05D003617 ORTHO05D007165 4.1e-35 153.3 250 41.6
PGSC0003DMG400047101 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.5e-34 151.4 398 32.4
PGSC0003DMG400043042 Solanum tuberosum HOM05D003617 ORTHO05D007165 2.0e-34 151.0 227 41.9
Nitab4.5_0002340g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.4e-34 150.2 408 30.4
Peaxi162Scf00588g00014 Petunia axillaris HOM05D003617 ORTHO05D007165 5.9e-34 149.4 188 42.0
Nitab4.5_0006852g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.2e-32 143.3 129 59.7
PGSC0003DMG400040197 Solanum tuberosum HOM05D003617 ORTHO05D007165 5.5e-32 142.9 419 32.2
PGSC0003DMG400039593 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.6e-31 141.4 218 43.1
PGSC0003DMG400046895 Solanum tuberosum HOM05D000995 ORTHO05D007165 3.6e-31 140.2 203 44.3
Nitab4.5_0002963g0060 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.9e-31 139.0 135 51.1
Nitab4.5_0003624g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.2e-30 136.3 101 69.3
Peaxi162Scf00991g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 2.6e-29 134.0 362 31.2
PGSC0003DMG400036889 Solanum tuberosum HOM05D003617 ORTHO05D007165 3.7e-28 130.2 127 52.0
Nitab4.5_0000055g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.3e-28 129.4 145 51.0
PGSC0003DMG400036263 Solanum tuberosum HOM05D003617 ORTHO05D007165 6.3e-28 129.4 127 52.8
PGSC0003DMG400040544 Solanum tuberosum HOM05D003617 ORTHO05D007165 6.3e-28 129.4 292 33.2
PGSC0003DMG400045313 Solanum tuberosum HOM05D003617 ORTHO05D007165 7.0e-27 125.9 233 36.1
PGSC0003DMG400041945 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.6e-26 124.8 127 50.4
Sopen10g011340 Solanum pennellii HOM05D003617 ORTHO05D007165 2.0e-26 124.4 125 52.0
Nitab4.5_0001101g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.0e-25 122.1 330 31.8
PGSC0003DMG400044095 Solanum tuberosum HOM05D003617 ORTHO05D007165 5.0e-25 119.8 154 45.5
PGSC0003DMG400036903 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.1e-24 118.6 418 28.2
PGSC0003DMG400038068 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.4e-22 111.7 142 43.0
Peaxi162Scf00445g00084 Petunia axillaris HOM05D003617 ORTHO05D007165 1.5e-21 108.2 208 36.1
Sopen01g028500 Solanum pennellii HOM05D003617 ORTHO05D000001 5.7e-21 106.3 415 28.2
Sopen11g010720 Solanum pennellii HOM05D003617 ORTHO05D007165 5.7e-21 106.3 417 29.5
Sopen09g010940 Solanum pennellii HOM05D003617 ORTHO05D007165 1.7e-20 104.8 202 36.6
Nitab4.5_0000623g0120 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.8e-20 103.2 194 40.7
Sopen06g006570 Solanum pennellii HOM05D000995 ORTHO05D002620 6.3e-20 102.8 272 30.9
Nitab4.5_0007928g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 8.2e-20 102.4 408 25.7
Nitab4.5_0005492g0140 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.3e-19 99.8 68 67.6
Peaxi162Scf00190g00514 Petunia axillaris HOM05D003617 ORTHO05D007165 3.8e-17 93.6 223 32.3
Sopen11g020610 Solanum pennellii HOM05D003617 ORTHO05D007165 1.5e-16 91.7 201 36.8
Nitab4.5_0000109g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.2e-16 89.4 193 30.1
PGSC0003DMG400042314 Solanum tuberosum HOM05D003617 ORTHO05D007165 9.4e-16 89.0 188 33.5
CAN.G755.17 Capsicum annuum HOM05D003617 ORTHO05D007165 1.6e-15 88.2 146 34.2
Nitab4.5_0000416g0200 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.8e-14 84.7 408 24.5
Nitab4.5_0000095g0100 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.3e-14 84.3 415 27.5
Solyc01g066890.2 Solanum lycopersicum HOM05D003617 ORTHO05D007165 2.3e-14 84.3 190 32.1
PGSC0003DMG400034694 Solanum tuberosum HOM05D003617 ORTHO05D007165 8.8e-14 82.4 303 27.7
Nitab4.5_0005492g0060 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.4e-13 80.1 253 28.5
Sopen10g017250 Solanum pennellii HOM05D000004 ORTHO05D007165 4.4e-13 80.1 86 50.0
Nitab4.5_0003624g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.8e-13 79.0 62 67.7
PGSC0003DMG400036438 Solanum tuberosum HOM05D003617 ORTHO05D007165 2.2e-12 77.8 95 42.1
PGSC0003DMG400030192 Solanum tuberosum HOM05D003617 ORTHO05D007165 4.8e-12 76.6 91 49.5
PGSC0003DMG400046986 Solanum tuberosum HOM05D003617 ORTHO05D007165 4.8e-12 76.6 129 38.0
PGSC0003DMG400035401 Solanum tuberosum HOM05D003617 ORTHO05D007165 7.0e-11 72.8 123 35.8
Solyc07g041360.1 Solanum lycopersicum HOM05D003617 ORTHO05D007165 2.9e-09 67.4 104 36.5
Nitab4.5_0017311g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.8e-09 67.0 151 34.4
PGSC0003DMG400017900 Solanum tuberosum HOM05D003617 ORTHO05D007165 3.8e-09 67.0 185 31.4
PGSC0003DMG400007445 Solanum tuberosum HOM05D003617 ORTHO05D007165 8.5e-09 65.9 94 44.7
Nitab4.5_0002555g0010 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.9e-08 64.7 50 64.0
PGSC0003DMG400037839 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.9e-08 64.7 94 43.6
Nitab4.5_0004591g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.2e-08 63.9 217 28.6
Nitab4.5_0004269g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.6e-07 60.5 125 33.6
Nitab4.5_0009477g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.7e-07 60.1 81 44.4
PGSC0003DMG400045403 Solanum tuberosum HOM05D003617 ORTHO05D007165 8.0e-07 59.3 85 41.2
Nitab4.5_0024231g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.8e-06 58.2 144 32.6


User provided reference genes

Program Settings