Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 1.1e-96 356.7 191 100.0
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 4.6e-58 228.4 130 93.1
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 1.8e-57 226.5 130 91.5
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 6.7e-57 224.6 130 92.3
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 1.9e-56 223.0 126 92.9
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 1.9e-56 223.0 126 92.9
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.8e-54 216.5 130 87.7
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 1.0e-52 210.7 128 86.7
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 1.7e-52 209.9 128 85.2
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 2.2e-52 209.5 128 84.4
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 2.9e-52 209.1 128 85.9
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 4.9e-52 208.4 128 86.7
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 4.9e-52 208.4 130 83.1
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 4.9e-52 208.4 128 85.2
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 6.5e-52 208.0 128 85.2
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.1e-51 207.2 128 85.2
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 1.1e-51 207.2 128 85.2
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 1.4e-51 206.8 152 74.3
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 2.5e-51 206.1 128 84.4
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 3.2e-51 205.7 128 84.4
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 3.2e-51 205.7 127 83.5
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 3.2e-51 205.7 131 80.9
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 4.2e-51 205.3 128 81.2
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 4.2e-51 205.3 128 82.8
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 4.2e-51 205.3 128 82.8
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 4.2e-51 205.3 130 83.8
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 7.1e-51 204.5 128 83.6
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 7.1e-51 204.5 128 84.4
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 9.3e-51 204.1 128 84.4
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 1.6e-50 203.4 128 81.2
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 2.1e-50 203.0 128 82.8
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 2.1e-50 203.0 128 83.6
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 2.1e-50 203.0 128 82.0
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 3.5e-50 202.2 128 82.0
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 4.6e-50 201.8 128 82.8
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 4.6e-50 201.8 128 82.8
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 7.9e-50 201.1 130 81.5
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 1.0e-49 200.7 128 82.0
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 1.8e-49 199.9 128 81.2
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 2.3e-49 199.5 128 81.2
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 2.3e-49 199.5 128 82.0
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 3.0e-49 199.1 128 82.0
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 3.9e-49 198.7 128 79.7
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 6.7e-49 198.0 130 81.5
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 8.7e-49 197.6 128 79.7
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 8.7e-49 197.6 122 84.4
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 8.7e-49 197.6 128 81.2
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 3.3e-48 195.7 128 79.7
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 4.3e-48 195.3 130 80.0
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 5.7e-48 194.9 128 79.7
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 9.6e-48 194.1 128 79.7
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 1.3e-47 193.7 128 79.7
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 1.3e-47 193.7 130 78.5
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 1.6e-47 193.4 128 77.3
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 2.1e-47 193.0 134 78.4
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 2.1e-47 193.0 128 77.3
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 2.8e-47 192.6 128 75.8
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 4.8e-47 191.8 128 78.1
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 4.8e-47 191.8 128 82.0
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 6.3e-47 191.4 128 78.1
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 6.3e-47 191.4 128 78.1
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 6.3e-47 191.4 130 76.2
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 8.2e-47 191.0 119 83.2
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 1.4e-46 190.3 130 75.4
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 1.4e-46 190.3 127 76.4
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.8e-46 189.9 125 77.6
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 1.8e-46 189.9 130 75.4
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 1.8e-46 189.9 128 75.8
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 2.4e-46 189.5 126 75.4
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 2.4e-46 189.5 130 75.4
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 3.1e-46 189.1 129 76.7
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 3.1e-46 189.1 126 78.6
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 6.9e-46 188.0 128 75.0
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 9.0e-46 187.6 121 82.6
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 2.0e-45 186.4 129 73.6
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 4.5e-45 185.3 128 73.4
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 5.9e-45 184.9 128 75.0
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 1.3e-44 183.7 131 79.4
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 1.7e-44 183.3 112 85.7
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 1.1e-43 180.6 120 76.7
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 1.9e-43 179.9 130 74.6
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 2.5e-43 179.5 128 73.4
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 4.2e-43 178.7 128 76.6
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 7.2e-43 177.9 127 73.2
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 7.2e-43 177.9 122 77.0
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 7.2e-43 177.9 120 80.0
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 2.3e-41 172.9 128 74.2
Nitab4.5_0000170g0080 Nicotiana tabacum HOM05D006291 ORTHO05D007669 3.9e-41 172.2 96 95.8
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 5.1e-41 171.8 125 76.8
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 1.5e-40 170.2 136 67.6
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 4.3e-40 168.7 171 57.9
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 9.7e-40 167.5 128 71.9
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 1.6e-39 166.8 128 71.1
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 1.6e-39 166.8 128 71.1
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 2.8e-39 166.0 103 83.5
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 1.3e-36 157.1 103 76.7
Actinidia02472 Actinidia chinensis HOM05D006291 ORTHO05D007669 5.0e-36 155.2 104 78.8
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 5.0e-36 155.2 185 52.4
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 6.5e-36 154.8 130 60.0
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 1.4e-35 153.7 130 60.8
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 1.2e-34 150.6 98 78.6
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 1.2e-34 150.6 116 71.6
Dinv12620 Davidia involucrata HOM05D006291 ORTHO05D007669 2.0e-32 143.3 92 81.5
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 2.2e-31 139.8 101 76.2
Nitab4.5_0002603g0030 Nicotiana tabacum HOM05D006291 ORTHO05D007669 1.2e-29 134.0 72 98.6
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 5.9e-29 131.7 122 55.7
BcaC04g20645 Brassica carinata HOM05D006291 ORTHO05D007669 1.2e-26 124.0 92 72.8
BraA03t10896Z Brassica rapa HOM05D006291 ORTHO05D007669 5.7e-24 115.2 94 68.1
BolC9t56988H Brassica oleracea HOM05D006291 ORTHO05D007669 7.4e-24 114.8 92 70.7
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis HOM05D006291 ORTHO05D007669 1.7e-23 113.6 99 53.5
C09p41100 Brassica napus HOM05D006291 ORTHO05D007669 2.8e-23 112.8 93 68.8
SalBow3G3584 Salvia bowleyana HOM05D006291 ORTHO05D007669 2.6e-21 106.3 105 61.0
Actinidia07563 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.3e-20 104.0 66 81.8
Os02g0462900 Oryza sativa ssp. japonica HOM05D006291 ORTHO05D007669 6.5e-20 101.7 63 77.8
ClCG11G011210 Citrullus lanatus HOM05D006291 ORTHO05D007669 1.5e-19 100.5 62 83.9
BcaB08g35517 Brassica carinata HOM05D006291 ORTHO05D007669 2.7e-18 96.3 64 76.6
BolC3t14281H Brassica oleracea HOM05D006291 ORTHO05D007669 1.8e-17 93.6 64 75.0
CARHR104040 Cardamine hirsuta HOM05D006291 ORTHO05D007669 6.7e-17 91.7 62 77.4
SEGI_05817 Sequoiadendron giganteum HOM05D006291 ORTHO05D007669 2.0e-16 90.1 63 71.4
BolC3t14280H Brassica oleracea HOM05D006291 ORTHO05D007669 5.7e-16 88.6 62 72.6
Cpa.g.sc91.61 Carica papaya HOM05D006291 ORTHO05D007669 9.7e-16 87.8 55 83.6
PRCOL_00006384 Prasinoderma coloniale HOM05D006291 ORTHO05D007669 4.5e-13 79.0 117 36.8
MCO11G208 Micromonas commoda HOM05D006291 ORTHO05D007669 1.8e-09 67.0 115 34.8
CBR_g16047 Chara braunii HOM05D006291 ORTHO05D007669 1.2e-08 64.3 61 52.5
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 1.5e-08 63.9 38 81.6
Haze_19088 Corylus avellana HOM05D000287 ORTHO05D000319 4.4e-08 62.4 41 73.2


User provided reference genes

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