Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003139g0080 Nicotiana tabacum HOM05D005951 ORTHO05D007025 1.2e-115 419.9 211 100.0
Nitab4.5_0000170g0090 Nicotiana tabacum HOM05D005951 ORTHO05D007025 4.9e-109 397.9 232 89.2
CAN.G54.13 Capsicum annuum HOM05D005951 ORTHO05D007025 1.1e-100 370.2 232 83.6
PGSC0003DMG400013572 Solanum tuberosum HOM05D005951 ORTHO05D007025 1.6e-99 366.3 225 83.6
Solyc07g042570.3 Solanum lycopersicum HOM05D005951 ORTHO05D007025 2.7e-99 365.5 226 82.7
Sopen07g022260 Solanum pennellii HOM05D005951 ORTHO05D007025 6.0e-99 364.4 226 82.3
Peaxi162Scf00474g00521 Petunia axillaris HOM05D005951 ORTHO05D007025 2.3e-98 362.5 232 82.8
TAR383G1060 Trochodendron aralioides HOM05D005951 ORTHO05D007025 2.1e-96 355.9 232 77.2
Cpa.g.sc82.63 Carica papaya HOM05D005951 ORTHO05D007025 2.8e-96 355.5 238 76.1
CSS0032580 Camellia sinensis var. sinensis HOM05D005951 ORTHO05D007025 1.4e-95 353.2 236 76.7
Aqoxy7G04154 Aquilegia oxysepala HOM05D005951 ORTHO05D007025 8.9e-95 350.5 232 76.7
Duzib168G0975 Durio zibethinus HOM05D005951 ORTHO05D007025 1.2e-94 350.1 234 76.1
Manes.16G090500 Manihot esculenta HOM05D005951 ORTHO05D007025 2.0e-94 349.4 240 75.8
GSVIVG01015014001 Vitis vinifera HOM05D005951 ORTHO05D007025 2.6e-94 349.0 225 78.7
Gorai.009G038100 Gossypium raimondii HOM05D005951 ORTHO05D007025 7.5e-94 347.4 230 75.2
Dinv25506 Davidia involucrata HOM05D005951 ORTHO05D007025 1.3e-93 346.7 225 78.2
Thecc.09G070300 Theobroma cacao HOM05D005951 ORTHO05D007025 1.7e-93 346.3 236 74.6
Actinidia39617 Actinidia chinensis HOM05D005951 ORTHO05D007025 2.9e-93 345.5 234 75.6
Potri.006G136500 Populus trichocarpa HOM05D005951 ORTHO05D007025 3.7e-93 345.1 236 74.6
Atru.chr7.1767 Acer truncatum HOM05D005951 ORTHO05D007025 4.9e-93 344.7 233 74.2
Lsat_1_v5_gn_5_138841 Lactuca sativa HOM05D005951 ORTHO05D007025 1.4e-92 343.2 233 72.1
Gohir.D05G037600 Gossypium hirsutum HOM05D005951 ORTHO05D007025 1.9e-92 342.8 230 74.8
Gohir.A05G036100 Gossypium hirsutum HOM05D005951 ORTHO05D007025 3.2e-92 342.0 238 73.1
ClCG03G014750 Citrullus lanatus HOM05D005951 ORTHO05D007025 4.1e-92 341.7 233 73.8
QL11p002956 Quercus lobata HOM05D005951 ORTHO05D007025 4.1e-92 341.7 234 73.9
MD02G1102200 Malus domestica HOM05D005951 ORTHO05D007025 7.1e-92 340.9 234 73.5
Sabra06G0106700 Salix brachista HOM05D005951 ORTHO05D007025 7.1e-92 340.9 236 73.3
Nn6g35632 Nelumbo nucifera HOM05D005951 ORTHO05D007025 9.2e-92 340.5 233 74.7
Potri.018G063600 Populus trichocarpa HOM05D005951 ORTHO05D007025 1.6e-91 339.7 230 75.2
Sed0006808 Sechium edule HOM05D005951 ORTHO05D007025 1.6e-91 339.7 233 73.4
Cc06_g12700 Coffea canephora HOM05D005951 ORTHO05D007025 2.1e-91 339.3 230 74.3
Glyma.17G045500 Glycine max HOM05D005951 ORTHO05D007025 2.1e-91 339.3 232 73.7
CiPaw.04G140200 Carya illinoinensis HOM05D005951 ORTHO05D007025 2.7e-91 339.0 232 74.1
ATR0317G112 Amborella trichopoda HOM05D005951 ORTHO05D007025 6.0e-91 337.8 232 73.7
Cfa002937 Carpinus fangiana HOM05D005951 ORTHO05D007025 6.0e-91 337.8 232 74.6
CiPaw.03G200400 Carya illinoinensis HOM05D005951 ORTHO05D007025 6.0e-91 337.8 232 73.7
Lj4g0000458 Lotus japonicus HOM05D005951 ORTHO05D007025 7.8e-91 337.4 232 73.7
CsaV3_1G041410 Cucumis sativus L. HOM05D005951 ORTHO05D007025 1.0e-90 337.0 233 73.8
Duzib150G0422 Durio zibethinus HOM05D005951 ORTHO05D007025 1.0e-90 337.0 225 74.7
RcHm_v2.0_Chr2g0095941 Rosa chinensis HOM05D005951 ORTHO05D007025 1.0e-90 337.0 225 74.2
Sed0027227 Sechium edule HOM05D005951 ORTHO05D007025 1.0e-90 337.0 233 73.0
Manes.03G044600 Manihot esculenta HOM05D005951 ORTHO05D007025 1.3e-90 336.7 235 72.3
Prupe.7G192100 Prunus persica HOM05D005951 ORTHO05D007025 1.7e-90 336.3 233 72.5
Eucgr.C03197 Eucalyptus grandis HOM05D005951 ORTHO05D007025 3.9e-90 335.1 224 73.7
Eucgr.L02230 Eucalyptus grandis HOM05D005951 ORTHO05D007025 3.9e-90 335.1 224 73.7
FvH4_1g09390 Fragaria vesca HOM05D005951 ORTHO05D007025 5.1e-90 334.7 224 74.6
FAN19G2090 Fragaria x ananassa HOM05D005951 ORTHO05D007025 5.1e-90 334.7 224 74.6
FAN28G0037 Fragaria x ananassa HOM05D005951 ORTHO05D007025 8.6e-90 334.0 224 74.1
FAN28G0822 Fragaria x ananassa HOM05D005951 ORTHO05D007025 8.6e-90 334.0 224 74.1
FAN26G0600 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.5e-89 333.2 224 74.1
FAN26G2189 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.5e-89 333.2 224 73.7
VMungo1215G3086 Vigna mungo HOM05D005951 ORTHO05D007025 1.9e-89 332.8 232 73.3
CANSAT56G0193 Cannabis sativa HOM05D005951 ORTHO05D007025 3.3e-89 332.0 224 74.6
arahy.Tifrunner.gnm1.ann1.7AU96Q Arachis hypogaea HOM05D005951 ORTHO05D007025 4.3e-89 331.6 234 73.1
CANSAT56G0116 Cannabis sativa HOM05D005951 ORTHO05D007025 7.3e-89 330.9 224 74.6
Glyma.13G114300 Glycine max HOM05D005951 ORTHO05D007025 9.5e-89 330.5 232 73.3
arahy.Tifrunner.gnm1.ann1.JRQ3DB Arachis hypogaea HOM05D005951 ORTHO05D007025 1.6e-88 329.7 233 73.0
PSO724G0923 Papaver somniferum HOM05D005951 ORTHO05D007025 2.1e-88 329.3 232 72.0
TWI34G0930 Tripterygium wilfordii HOM05D005951 ORTHO05D007025 2.8e-88 328.9 236 72.0
Phvul.003G127300 Phaseolus vulgaris HOM05D005951 ORTHO05D007025 3.6e-88 328.6 232 72.8
MD15G1223700 Malus domestica HOM05D005951 ORTHO05D007025 4.7e-88 328.2 234 70.9
PSO135G0575 Papaver somniferum HOM05D005951 ORTHO05D007025 4.7e-88 328.2 232 71.6
FAN23G1113 Fragaria x ananassa HOM05D005951 ORTHO05D007025 8.1e-88 327.4 228 71.5
MSTRG.26500 Avicennia marina HOM05D005951 ORTHO05D007025 1.1e-87 327.0 236 69.5
Haze_26069 Corylus avellana HOM05D005951 ORTHO05D007025 1.1e-87 327.0 247 70.0
MBI13_g01673_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 1.4e-87 326.6 230 72.2
Medtr4g124640 Medicago truncatula HOM05D005951 ORTHO05D007025 1.4e-87 326.6 236 72.5
COL.COLO4_21208 Corchorus olitorius HOM05D005951 ORTHO05D007025 1.8e-87 326.2 230 72.6
Ciclev10009369m.g Citrus clementina HOM05D005951 ORTHO05D007025 2.3e-87 325.9 233 70.4
Migut.J00881 Erythranthe guttata HOM05D005951 ORTHO05D007025 2.3e-87 325.9 240 70.4
DCAR_028530 Daucus carota HOM05D005951 ORTHO05D007025 3.1e-87 325.5 233 70.8
Ca_21339_v3 Cicer arietinum L. HOM05D000240 ORTHO05D002721 1.5e-86 323.2 230 72.6
EL10Ac8g18966 Beta vulgaris HOM05D005951 ORTHO05D007025 2.0e-86 322.8 238 70.2
AUR62028321 Chenopodium quinoa HOM05D005951 ORTHO05D007025 2.0e-86 322.8 218 72.9
Lalb_Chr07g0181411 Lupinus albus HOM05D005951 ORTHO05D007025 9.9e-86 320.5 233 71.7
Oeu041808.1 Olea europaea HOM05D005951 ORTHO05D007025 9.9e-86 320.5 225 71.1
ECA234G1587 Erigeron canadensis HOM05D005951 ORTHO05D007025 6.4e-85 317.8 232 66.4
Lalb_Chr13g0299191 Lupinus albus HOM05D005951 ORTHO05D007025 8.3e-85 317.4 237 70.0
BraA01t00476Z Brassica rapa HOM05D000526 ORTHO05D007025 1.1e-84 317.0 232 68.1
Sp7g31000 Schrenkiella parvula HOM05D005951 ORTHO05D007025 2.4e-84 315.8 232 67.7
TPR.G12577 Trifolium pratense HOM05D005951 ORTHO05D007025 3.2e-84 315.5 226 70.4
BcaC01g01000 Brassica carinata HOM05D005951 ORTHO05D007025 9.2e-84 313.9 232 66.4
BolC3t20971H Brassica oleracea HOM05D005951 ORTHO05D007025 9.2e-84 313.9 232 66.4
HPP92_004361 Vanilla planifolia HOM05D005951 ORTHO05D007025 9.2e-84 313.9 222 69.8
BraA08t33722Z Brassica rapa HOM05D005951 ORTHO05D007025 1.2e-83 313.5 233 67.0
PGR044G1586 Punica granatum HOM05D005951 ORTHO05D007025 1.2e-83 313.5 232 71.6
Thhalv10026154m.g Eutrema salsugineum HOM05D005951 ORTHO05D007025 1.6e-83 313.2 232 66.8
BcaB03g12809 Brassica carinata HOM05D005951 ORTHO05D007025 2.1e-83 312.8 232 65.9
MELO3C015553.2 Cucumis melo HOM05D005951 ORTHO05D007025 2.1e-83 312.8 216 73.6
THA.LOC104803783 Tarenaya hassleriana HOM05D005951 ORTHO05D007025 2.1e-83 312.8 232 68.5
BcaC09g52137 Brassica carinata HOM05D005951 ORTHO05D007025 2.7e-83 312.4 232 67.2
C03p86770 Brassica napus HOM05D005951 ORTHO05D007025 3.5e-83 312.0 233 67.0
CDE07G2051 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 3.5e-83 312.0 234 68.8
Os03g0182700 Oryza sativa ssp. japonica HOM05D005951 ORTHO05D007025 1.0e-82 310.5 226 69.0
AL7G18300 Arabidopsis lyrata HOM05D005951 ORTHO05D007025 1.7e-82 309.7 232 66.8
C01p05390 Brassica napus HOM05D000526 ORTHO05D000956 1.7e-82 309.7 230 67.4
BolC1t00519H Brassica oleracea HOM05D000526 ORTHO05D007025 3.0e-82 308.9 224 68.8
A08p17720 Brassica napus HOM05D005951 ORTHO05D007025 3.9e-82 308.5 225 68.0
Zm00001eb401690 Zea mays HOM05D005951 ORTHO05D007025 1.9e-81 306.2 226 69.9
HanXRQChr10g0319821 Helianthus annuus HOM05D005951 ORTHO05D007025 5.6e-81 304.7 233 67.8
SGA_v2.0_scaffold55G19875 Striga asiatica HOM05D005951 ORTHO05D007025 5.6e-81 304.7 238 67.2
Hund26110 Selenicereus undatus HOM05D005951 ORTHO05D007025 1.6e-80 303.1 215 70.7
SEGI_21232 Sequoiadendron giganteum HOM05D005951 ORTHO05D007025 2.8e-80 302.4 233 66.5
Carub.0007s0721 Capsella rubella HOM05D005951 ORTHO05D007025 4.7e-80 301.6 233 65.2
Aa31LG5G9380 Aethionema arabicum HOM05D005951 ORTHO05D007025 1.1e-79 300.4 232 65.1
Oeu000276.3 Olea europaea HOM05D005951 ORTHO05D007025 6.8e-79 297.7 304 53.3
AT4G33250 Arabidopsis thaliana HOM05D005951 ORTHO05D007025 1.2e-78 297.0 232 65.1
vmacro17078 Vaccinium macrocarpon HOM05D005951 ORTHO05D007025 1.2e-78 297.0 318 52.8
Lj7C692T6 Lonicera japonica HOM05D005951 ORTHO05D007025 5.8e-78 294.7 224 70.1
A03p61920 Brassica napus HOM05D000526 ORTHO05D007025 1.4e-76 290.0 256 59.0
unitig_899.g15181 Utricularia gibba HOM05D005951 ORTHO05D007025 5.4e-76 288.1 225 63.6
MBI19_g36230_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 2.7e-75 285.8 232 65.9
Actinidia30258 Actinidia chinensis HOM05D005951 ORTHO05D007025 3.5e-75 285.4 187 77.0
Mapoly0073s0056 Marchantia polymorpha HOM05D005951 ORTHO05D007025 1.7e-74 283.1 222 62.6
Rhsim05G0002100 Rhododendron simsii HOM05D005951 ORTHO05D007025 1.1e-73 280.4 220 66.4
Pp3c18_14720 Physcomitrium patens HOM05D005951 ORTHO05D007025 5.6e-73 278.1 230 60.0
Pp3c21_14860 Physcomitrium patens HOM05D005951 ORTHO05D007025 1.3e-72 276.9 223 61.0
AUR62025338 Chenopodium quinoa HOM05D005951 ORTHO05D007025 3.1e-71 272.3 192 70.3
BcaNung02163 Brassica carinata HOM05D005951 ORTHO05D007025 5.8e-70 268.1 232 59.5
C07p59570 Brassica napus HOM05D005951 ORTHO05D007025 2.2e-69 266.2 232 59.5
SMO239G0051 Selaginella moellendorffii HOM05D005951 ORTHO05D007025 6.4e-69 264.6 232 55.6
Zm00001eb401710 Zea mays HOM05D005951 ORTHO05D007025 2.1e-67 259.6 198 68.2
BraA03t15230Z Brassica rapa HOM05D005951 ORTHO05D007025 4.6e-67 258.5 191 67.0
CDE06G1359 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 2.5e-65 252.7 198 67.2
Zm00001eb006150 Zea mays HOM05D005951 ORTHO05D007025 2.4e-55 219.5 168 67.3
BolC7t46402H Brassica oleracea HOM05D005951 ORTHO05D007025 1.0e-53 214.2 197 56.9
Sc08g0009170 Simmondsia chinensis HOM05D005951 ORTHO05D007025 5.5e-52 208.4 154 69.5
Migut.L01596 Erythranthe guttata HOM05D005951 ORTHO05D007025 1.3e-50 203.8 224 51.3
AagrBONN_evm.TU.Sc2ySwM_117.912 Anthoceros agrestis HOM05D005951 ORTHO05D007025 3.2e-44 182.6 155 58.7
CBR_g16046 Chara braunii HOM05D005951 ORTHO05D007025 2.3e-42 176.4 218 45.4
CARHR241300 Cardamine hirsuta HOM05D005951 ORTHO05D007025 3.9e-42 175.6 119 67.2
Cre12.g515650 Chlamydomonas reinhardtii HOM05D005951 ORTHO05D007025 5.7e-25 118.6 200 32.0
SalBow6G6500 Salvia bowleyana HOM05D005951 ORTHO05D007025 1.3e-24 117.5 70 78.6
MD02G1101200 Malus domestica HOM05D005951 ORTHO05D007025 4.4e-17 92.4 86 61.6
PRCOL_00003879 Prasinoderma coloniale HOM05D005951 ORTHO05D007025 5.0e-13 79.0 170 30.0
ATR0705G105 Amborella trichopoda HOM05D005951 ORTHO05D007025 3.0e-10 69.7 40 72.5


User provided reference genes

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