Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003136g0030 Nicotiana tabacum HOM05D007543 ORTHO05D009555 5.0e-162 574.3 276 100.0
Nitab4.5_0000451g0150 Nicotiana tabacum HOM05D007543 ORTHO05D009555 3.5e-139 498.4 292 85.3
PGSC0003DMG400011574 Solanum tuberosum HOM05D007543 ORTHO05D009555 1.6e-104 383.3 244 77.0
CAN.G1588.1 Capsicum annuum HOM05D007543 ORTHO05D009555 1.7e-98 363.2 255 69.0
Duzib151G0611 Durio zibethinus HOM05D007543 ORTHO05D009555 8.9e-87 324.3 217 68.2
CiPaw.01G206300 Carya illinoinensis HOM05D007543 ORTHO05D009555 2.0e-86 323.2 245 64.5
Potri.010G060800 Populus trichocarpa HOM05D007543 ORTHO05D009555 2.0e-86 323.2 244 63.1
Thecc.04G215800 Theobroma cacao HOM05D007543 ORTHO05D009555 5.8e-86 321.6 216 69.0
COL.COLO4_05738 Corchorus olitorius HOM05D007543 ORTHO05D009555 1.3e-85 320.5 225 66.2
Hma1.2p1_1076F.1_g254630 Hydrangea macrophylla HOM05D007543 ORTHO05D009555 2.2e-85 319.7 234 66.7
Manes.15G048300 Manihot esculenta HOM05D007543 ORTHO05D009555 3.8e-85 318.9 239 63.2
Potri.008G175200 Populus trichocarpa HOM05D007543 ORTHO05D009555 3.8e-85 318.9 242 62.0
Nn1g03077 Nelumbo nucifera HOM05D007543 ORTHO05D009555 1.1e-84 317.4 239 62.3
Actinidia35927 Actinidia chinensis HOM05D007543 ORTHO05D009555 5.4e-84 315.1 267 59.9
QL06p022584 Quercus lobata HOM05D007543 ORTHO05D009555 2.1e-83 313.2 252 60.7
TWI53G0267 Tripterygium wilfordii HOM05D007543 ORTHO05D009555 1.0e-82 310.8 222 64.4
Ciclev10005680m.g Citrus clementina HOM05D007543 ORTHO05D009555 5.1e-82 308.5 220 65.9
Atru.chr4.1820 Acer truncatum HOM05D007543 ORTHO05D009555 1.5e-81 307.0 218 67.0
ClCG05G003720 Citrullus lanatus HOM05D007543 ORTHO05D009555 1.9e-81 306.6 244 60.7
CiPaw.02G128000 Carya illinoinensis HOM05D007543 ORTHO05D009555 3.3e-81 305.8 245 60.4
CsaV3_3G011440 Cucumis sativus L. HOM05D007543 ORTHO05D009555 1.2e-80 303.9 262 58.0
TAR362G0720 Trochodendron aralioides HOM05D007543 ORTHO05D009555 3.6e-80 302.4 223 64.1
Rhsim09G0045000 Rhododendron simsii HOM05D007543 ORTHO05D009555 2.4e-79 299.7 247 59.9
DCAR_002284 Daucus carota HOM05D007543 ORTHO05D009555 3.4e-78 295.8 236 61.0
HanXRQChr01g0022581 Helianthus annuus HOM05D007543 ORTHO05D009555 5.8e-78 295.0 219 64.4
CSS0020488 Camellia sinensis var. sinensis HOM05D007543 ORTHO05D009555 1.7e-77 293.5 255 58.0
Lsat_1_v5_gn_1_76300 Lactuca sativa HOM05D007543 ORTHO05D009555 5.4e-76 288.5 212 63.7
Sed0003983 Sechium edule HOM05D007543 ORTHO05D009555 7.1e-76 288.1 219 62.6
ATR0787G197 Amborella trichopoda HOM05D007543 ORTHO05D009555 6.0e-75 285.0 218 61.5
Lsat_1_v5_gn_2_41901 Lactuca sativa HOM05D007543 ORTHO05D009555 1.7e-74 283.5 242 58.3
SEGI_36435 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 6.6e-74 281.6 215 63.3
PSO764G0201 Papaver somniferum HOM05D007543 ORTHO05D009555 8.7e-74 281.2 225 59.1
Ciclev10005675m.g Citrus clementina HOM05D007543 ORTHO05D009555 2.5e-73 279.6 223 61.0
Sc19g0005790 Simmondsia chinensis HOM05D007543 ORTHO05D009555 3.3e-73 279.3 241 54.4
Lsat_1_v5_gn_0_4520 Lactuca sativa HOM05D007543 ORTHO05D009555 1.3e-72 277.3 215 61.9
vmacro00522 Vaccinium macrocarpon HOM05D007543 ORTHO05D009555 8.1e-72 274.6 250 56.4
Sabra08G0133600 Salix brachista HOM05D007543 ORTHO05D009555 1.1e-71 274.2 231 57.1
Lsat_1_v5_gn_1_76260 Lactuca sativa HOM05D007543 ORTHO05D009555 4.0e-71 272.3 238 56.3
EL10Ac3g06745 Beta vulgaris HOM05D007543 ORTHO05D009555 2.6e-70 269.6 211 59.2
Lsat_1_v5_gn_0_4560 Lactuca sativa HOM05D007543 ORTHO05D009555 2.6e-70 269.6 214 60.7
Actinidia25090 Actinidia chinensis HOM05D007543 ORTHO05D009555 6.4e-69 265.0 180 66.7
Os07g0170800 Oryza sativa ssp. japonica HOM05D007543 ORTHO05D009555 4.2e-68 262.3 220 55.9
Zm00001eb222310 Zea mays HOM05D007543 ORTHO05D009555 1.6e-67 260.4 220 54.1
Haze_11534 Corylus avellana HOM05D007543 ORTHO05D009555 1.5e-65 253.8 254 52.4
Lsat_1_v5_gn_1_76220 Lactuca sativa HOM05D007543 ORTHO05D009555 4.3e-65 252.3 257 51.4
Migut.G00602 Erythranthe guttata HOM05D007543 ORTHO05D009555 4.0e-63 245.7 182 58.8
MELO3C006351.2 Cucumis melo HOM05D007543 ORTHO05D009555 1.3e-61 240.7 233 51.5
Peaxi162Scf00047g00165 Petunia axillaris HOM05D007543 ORTHO05D009555 3.4e-54 216.1 103 91.3
Solyc09g091160.1 Solanum lycopersicum HOM05D007543 ORTHO05D009555 2.9e-53 213.0 103 89.3
Cfa014866 Carpinus fangiana HOM05D007543 ORTHO05D009555 7.1e-52 208.4 124 69.4
PSO832G0138 Papaver somniferum HOM05D007543 ORTHO05D009555 6.7e-50 201.8 177 55.4
AUR62035334 Chenopodium quinoa HOM05D007543 ORTHO05D009555 8.7e-50 201.4 127 63.8
AUR62035905 Chenopodium quinoa HOM05D007543 ORTHO05D009555 8.7e-50 201.4 127 63.8
Cc03_g07030 Coffea canephora HOM05D007543 ORTHO05D009555 2.5e-49 199.9 124 65.3
Eucgr.H02864 Eucalyptus grandis HOM05D007543 ORTHO05D009555 9.7e-49 198.0 151 64.2
HanXRQChr01g0022591 Helianthus annuus HOM05D007543 ORTHO05D009555 8.2e-48 194.9 217 47.9
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 1.1e-47 194.5 294 37.4
Lj6A641T47 Lonicera japonica HOM05D007543 ORTHO05D009555 9.0e-47 191.4 109 75.2
SMO142G0023 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 1.2e-46 191.0 237 42.2
RcHm_v2.0_Chr4g0396531 Rosa chinensis HOM05D007543 ORTHO05D009555 7.7e-46 188.3 181 54.7
GSVIVG01029024001 Vitis vinifera HOM05D007543 ORTHO05D009555 7.7e-46 188.3 135 67.4
CANSAT78G0099 Cannabis sativa HOM05D007543 ORTHO05D009555 1.0e-45 188.0 130 62.3
MBI10_g16799_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 1.1e-44 184.5 109 71.6
FAN07G2337 Fragaria x ananassa HOM05D007543 ORTHO05D009555 1.9e-44 183.7 133 59.4
MD13G1227800 Malus domestica HOM05D007543 ORTHO05D009555 2.1e-43 180.3 107 70.1
HanXRQChr06g0183251 Helianthus annuus HOM05D007543 ORTHO05D009555 5.1e-42 175.6 106 71.7
ECA248G0596 Erigeron canadensis HOM05D007543 ORTHO05D009555 1.1e-41 174.5 104 68.3
unitig_0.g2250 Utricularia gibba HOM05D007543 ORTHO05D009555 2.8e-40 169.9 108 62.0
SMO358G0284 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 1.8e-39 167.2 221 40.3
SalBow2G1589 Salvia bowleyana HOM05D007543 ORTHO05D009555 6.9e-39 165.2 108 66.7
Dinv29773 Davidia involucrata HOM05D007543 ORTHO05D009555 2.6e-33 146.7 86 70.9
Mapoly0044s0133 Marchantia polymorpha HOM05D007543 ORTHO05D009555 3.7e-32 142.9 202 37.1
HanXRQChr06g0183241 Helianthus annuus HOM05D007543 ORTHO05D009555 1.0e-29 134.8 138 52.9
AagrBONN_evm.TU.Sc2ySwM_368.1268 Anthoceros agrestis HOM05D007543 ORTHO05D009555 2.2e-29 133.7 251 33.9
AagrBONN_evm.TU.Sc2ySwM_117.1924 Anthoceros agrestis HOM05D007543 ORTHO05D009555 8.5e-29 131.7 225 34.7
MD13G1227700 Malus domestica HOM05D007543 ORTHO05D009555 7.2e-28 128.6 110 58.2
Hund24855 Selenicereus undatus HOM05D007543 ORTHO05D009555 1.8e-23 114.0 73 60.3
Dinv29774 Davidia involucrata HOM05D007543 ORTHO05D009555 3.1e-23 113.2 114 55.3
FAN11G1069 Fragaria x ananassa HOM05D007543 ORTHO05D009555 3.8e-21 106.3 221 31.7
SMO356G0252 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 8.5e-21 105.1 204 34.8
SEGI_36569 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 8.5e-21 105.1 207 30.4
AagrBONN_evm.TU.Sc2ySwM_344.5003 Anthoceros agrestis HOM05D007543 ORTHO05D009555 4.7e-19 99.4 165 38.2
Sopen09g034130 Solanum pennellii HOM05D007543 ORTHO05D009555 1.0e-18 98.2 90 66.7
Pp3c4_1040 Physcomitrium patens HOM05D007543 ORTHO05D009555 2.3e-18 97.1 207 33.3
Solyc09g091150.2 Solanum lycopersicum HOM05D007543 ORTHO05D009555 1.2e-17 94.7 90 65.6
Cc03_g07020 Coffea canephora HOM05D007543 ORTHO05D009555 9.1e-15 85.1 63 65.1
Cre10.g418851 Chlamydomonas reinhardtii HOM05D007543 ORTHO05D009555 3.2e-12 76.6 221 27.6
MBI10_g16797_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 2.0e-09 67.4 77 50.6
Cpa.g.sc59.61 Carica papaya HOM05D007543 ORTHO05D009555 1.7e-08 64.3 72 52.8
Ciclev10006635m.g Citrus clementina HOM05D007543 ORTHO05D009555 2.2e-08 63.9 137 32.8
Lj6C641T2 Lonicera japonica HOM05D007543 ORTHO05D009555 1.1e-07 61.6 46 69.6
Oeu024843.1 Olea europaea HOM05D007543 ORTHO05D009555 2.0e-06 57.4 75 48.0
Potri.010G061000 Populus trichocarpa HOM05D007543 ORTHO05D009555 2.7e-06 57.0 72 50.0
SalBow2G0410 Salvia bowleyana HOM05D007543 ORTHO05D009555 3.5e-06 56.6 80 47.5


User provided reference genes

Program Settings