Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003132g0110 Nicotiana tabacum HOM05D006537 ORTHO05D008186 1.1e-142 510.0 268 100.0
PGSC0003DMG400027008 Solanum tuberosum HOM05D006537 ORTHO05D008186 1.2e-104 383.6 203 96.1
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 2.1e-104 382.9 203 95.6
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 2.1e-104 382.9 203 95.6
Nitab4.5_0004579g0020 Nicotiana tabacum HOM05D006537 ORTHO05D008186 3.5e-104 382.1 203 96.6
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 3.3e-102 375.6 203 92.6
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 5.4e-97 358.2 228 80.7
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 8.7e-95 350.9 217 80.6
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 1.9e-94 349.7 228 79.4
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 4.3e-94 348.6 228 77.6
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 2.8e-93 345.9 228 77.2
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 4.7e-93 345.1 228 76.8
vmacro22675 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 4.7e-93 345.1 219 79.0
Manes.04G042325 Manihot esculenta HOM05D006537 ORTHO05D008186 1.8e-92 343.2 204 83.3
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 2.4e-92 342.8 217 78.3
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 2.4e-92 342.8 217 78.8
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 2.4e-92 342.8 227 76.2
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 3.1e-92 342.4 207 81.6
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 9.0e-92 340.9 217 78.3
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 1.2e-91 340.5 217 77.9
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 1.2e-91 340.5 228 75.4
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 1.2e-91 340.5 228 74.1
COL.COLO4_24411 Corchorus olitorius HOM05D006537 ORTHO05D008186 2.0e-91 339.7 204 82.4
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 2.6e-91 339.3 217 77.0
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 2.6e-91 339.3 217 76.0
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 3.4e-91 339.0 217 76.0
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 3.4e-91 339.0 207 80.7
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 1.3e-90 337.0 217 77.4
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 1.7e-90 336.7 237 74.3
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 1.7e-90 336.7 207 80.2
Aqoxy2G04100 Aquilegia oxysepala HOM05D006537 ORTHO05D008186 2.9e-90 335.9 207 79.2
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 2.9e-90 335.9 217 75.1
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 2.9e-90 335.9 228 72.8
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 1.1e-89 334.0 222 75.7
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 1.1e-89 334.0 217 74.7
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 1.4e-89 333.6 222 76.1
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 1.4e-89 333.6 217 76.5
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 1.4e-89 333.6 233 73.8
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 1.4e-89 333.6 207 79.2
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 1.9e-89 333.2 222 75.2
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 2.4e-89 332.8 217 75.6
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 2.4e-89 332.8 217 75.6
Sabra07G0103400 Salix brachista HOM05D006537 ORTHO05D008186 2.4e-89 332.8 213 78.9
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 3.2e-89 332.4 219 75.8
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 3.2e-89 332.4 207 77.8
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 3.2e-89 332.4 207 77.8
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 3.2e-89 332.4 217 75.1
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 3.2e-89 332.4 217 75.1
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 3.2e-89 332.4 217 75.1
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 4.2e-89 332.0 228 72.8
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 4.2e-89 332.0 207 78.7
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 5.4e-89 331.6 207 79.2
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 5.4e-89 331.6 240 72.9
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 7.1e-89 331.3 217 76.0
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 7.1e-89 331.3 228 71.1
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 1.6e-88 330.1 217 75.6
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 1.6e-88 330.1 223 75.8
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 2.7e-88 329.3 228 73.7
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 1.0e-87 327.4 207 76.8
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 1.7e-87 326.6 217 74.7
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 1.7e-87 326.6 233 70.4
Dinv44198 Davidia involucrata HOM05D006537 ORTHO05D008186 2.3e-87 326.2 184 89.7
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 2.3e-87 326.2 207 76.8
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 2.3e-87 326.2 226 72.6
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 3.9e-87 325.5 207 77.3
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 5.1e-87 325.1 207 81.6
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 5.1e-87 325.1 217 74.7
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 6.6e-87 324.7 217 74.2
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 1.1e-86 323.9 217 73.3
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 1.9e-86 323.2 207 75.8
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 2.5e-86 322.8 217 74.2
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 2.5e-86 322.8 217 74.2
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 2.1e-85 319.7 231 70.1
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 2.8e-85 319.3 207 76.3
ECA238G3138 Erigeron canadensis HOM05D000961 ORTHO05D000001 4.8e-85 318.5 243 68.3
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 1.8e-84 316.6 207 75.4
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 3.1e-84 315.8 214 75.2
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 1.2e-83 313.9 207 76.8
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 9.9e-83 310.8 222 72.5
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 1.7e-82 310.1 217 71.0
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 2.9e-82 309.3 238 66.4
Cpa.g.sc409.1 Carica papaya HOM05D006537 ORTHO05D008186 1.1e-81 307.4 204 77.0
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 1.6e-80 303.5 227 69.6
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 2.1e-80 303.1 207 71.0
HPP92_005584 Vanilla planifolia HOM05D006537 ORTHO05D008186 2.7e-80 302.8 217 70.0
HPP92_005589 Vanilla planifolia HOM05D006537 ORTHO05D008186 3.5e-80 302.4 217 70.0
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 1.1e-78 297.4 227 67.8
Zm00001eb237480 Zea mays HOM05D006537 ORTHO05D008186 4.3e-78 295.4 207 68.1
SEGI_14947 Sequoiadendron giganteum HOM05D006537 ORTHO05D008186 2.4e-76 289.7 207 68.6
ATR0686G132 Amborella trichopoda HOM05D006537 ORTHO05D008186 9.9e-75 284.3 233 62.7
Os02g0272600 Oryza sativa ssp. japonica HOM05D006537 ORTHO05D008186 3.2e-73 279.3 207 66.2
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 1.6e-69 266.9 217 65.4
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 7.6e-67 258.1 170 71.8
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 9.3e-65 251.1 207 65.2
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 1.5e-62 243.8 166 67.5
Mapoly0042s0024 Marchantia polymorpha HOM05D006537 ORTHO05D008186 1.4e-60 237.3 219 55.7
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis HOM05D006537 ORTHO05D008186 1.8e-60 236.9 217 54.4
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 1.0e-58 231.1 228 56.6
FAN07G2858 Fragaria x ananassa HOM05D006537 ORTHO05D008186 3.8e-58 229.2 202 62.9
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 6.5e-58 228.4 235 58.7
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 7.2e-57 224.9 228 55.3
SMO174G0097 Selaginella moellendorffii HOM05D006537 ORTHO05D008186 8.2e-53 211.5 215 49.8
PSO675G1145 Papaver somniferum HOM05D006537 ORTHO05D008186 2.0e-51 206.8 156 68.6
PSO675G6606 Papaver somniferum HOM05D006537 ORTHO05D008186 2.0e-51 206.8 147 70.1
Pp3c14_4280 Physcomitrium patens HOM05D006537 ORTHO05D008186 3.4e-51 206.1 209 49.3
PSO229G0026 Papaver somniferum HOM05D006537 ORTHO05D008186 1.7e-50 203.8 147 69.4
Pp3c10_5780 Physcomitrium patens HOM05D006537 ORTHO05D008186 1.7e-50 203.8 220 46.4
SalBow7G4202 Salvia bowleyana HOM05D006537 ORTHO05D008186 1.2e-48 197.6 113 81.4
PSO832G3398 Papaver somniferum HOM05D006537 ORTHO05D008186 2.1e-48 196.8 119 81.5
PSO017G0422 Papaver somniferum HOM05D006537 ORTHO05D008186 1.1e-46 191.0 127 75.6
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 3.1e-44 183.0 128 68.0
DCAR_022903 Daucus carota HOM05D006537 ORTHO05D008186 6.3e-37 158.7 119 70.6
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 3.5e-35 152.9 127 59.1
BraA10t42699Z Brassica rapa HOM05D006537 ORTHO05D008186 1.9e-33 147.1 95 73.7
Lj6P622T45 Lonicera japonica HOM05D006537 ORTHO05D008186 1.7e-29 134.0 89 70.8
Cre13.g576300 Chlamydomonas reinhardtii HOM05D006537 ORTHO05D008186 4.5e-27 125.9 210 38.1
vmacro00700 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 2.9e-18 96.7 130 48.5
CBR_g29804 Chara braunii HOM05D006537 ORTHO05D008186 6.6e-18 95.5 71 64.8
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 1.5e-14 84.3 65 63.1
PRCOL_00006256 Prasinoderma coloniale HOM05D006537 ORTHO05D008186 7.8e-11 72.0 216 27.3
Sopen06g005930 Solanum pennellii HOM05D006537 ORTHO05D008186 4.3e-09 66.2 40 90.0


User provided reference genes

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