Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003129g0050 Nicotiana tabacum HOM05D007502 ORTHO05D010230 1.7e-42 175.6 91 100.0
Nitab4.5_0000142g0280 Nicotiana tabacum HOM05D007502 ORTHO05D010230 3.8e-26 121.3 107 67.3
Solyc02g092200.3 Solanum lycopersicum HOM05D007502 ORTHO05D010230 2.1e-24 115.5 80 78.8
Sopen02g036770 Solanum pennellii HOM05D007502 ORTHO05D010230 1.8e-23 112.5 80 77.5
Peaxi162Scf00548g00223 Petunia axillaris HOM05D007502 ORTHO05D010230 1.3e-21 106.3 81 75.3
PGSC0003DMG401021412 Solanum tuberosum HOM05D007502 ORTHO05D010230 5.0e-18 94.4 81 70.4
Cc07_g07260 Coffea canephora HOM05D007502 ORTHO05D010230 3.1e-12 75.1 84 57.1
Dinv26948 Davidia involucrata HOM05D001896 ORTHO05D001862 1.5e-11 72.8 83 59.0
CSS0004026 Camellia sinensis var. sinensis HOM05D007502 ORTHO05D010230 6.5e-10 67.4 75 60.0
CSS0024819 Camellia sinensis var. sinensis HOM05D007502 ORTHO05D010230 6.5e-10 67.4 75 60.0
MSTRG.3478 Avicennia marina HOM05D007502 ORTHO05D010230 8.5e-10 67.0 72 52.8
Cfa004764 Carpinus fangiana HOM05D007502 ORTHO05D010230 1.4e-09 66.2 77 57.1
Lsat_1_v5_gn_2_82580 Lactuca sativa HOM05D007502 ORTHO05D010230 1.4e-09 66.2 77 51.9
Haze_10361 Corylus avellana HOM05D007502 ORTHO05D010230 4.2e-09 64.7 77 54.5
Thecc.01G074400 Theobroma cacao HOM05D007502 ORTHO05D010230 4.2e-09 64.7 74 59.5
MD15G1299000 Malus domestica HOM05D007502 ORTHO05D010230 7.2e-09 63.9 78 51.3
Lsat_1_v5_gn_4_132041 Lactuca sativa HOM05D007502 ORTHO05D010230 1.2e-08 63.2 75 52.0
Gorai.007G225000 Gossypium raimondii HOM05D007502 ORTHO05D010230 4.7e-08 61.2 82 50.0
Ciclev10027603m.g Citrus clementina HOM05D007502 ORTHO05D010230 6.1e-08 60.8 83 48.2
Duzib187G0517 Durio zibethinus HOM05D007502 ORTHO05D010230 6.1e-08 60.8 59 61.0
CiPaw.01G003100 Carya illinoinensis HOM05D007502 ORTHO05D010230 1.0e-07 60.1 87 47.1
Prupe.6G218900 Prunus persica HOM05D007502 ORTHO05D010230 1.0e-07 60.1 78 48.7
Potri.007G006000 Populus trichocarpa HOM05D007502 ORTHO05D010230 1.4e-07 59.7 83 51.8
Gohir.A11G213400 Gossypium hirsutum HOM05D007502 ORTHO05D010230 2.3e-07 58.9 59 57.6
RhsimUnG0241800 Rhododendron simsii HOM05D007502 ORTHO05D010230 2.3e-07 58.9 74 52.7
Gohir.D11G209800 Gossypium hirsutum HOM05D007502 ORTHO05D010230 3.0e-07 58.5 82 48.8
DCAR_025816 Daucus carota HOM05D007502 ORTHO05D010230 5.1e-07 57.8 73 50.7
Aqoxy6G02556 Aquilegia oxysepala HOM05D007502 ORTHO05D010230 8.8e-07 57.0 48 62.5
Eucgr.I00691 Eucalyptus grandis HOM05D007502 ORTHO05D010230 8.8e-07 57.0 94 45.7
Lsat_1_v5_gn_5_174300 Lactuca sativa HOM05D007502 ORTHO05D010230 2.0e-06 55.8 73 49.3
Cpa.g.c26343.2 Carica papaya HOM05D007502 ORTHO05D010230 3.3e-06 55.1 75 46.7
Actinidia11971 Actinidia chinensis HOM05D007502 ORTHO05D010230 5.7e-06 54.3 73 50.7
arahy.Tifrunner.gnm1.ann1.W7GVX2 Arachis hypogaea HOM05D007502 ORTHO05D010230 5.7e-06 54.3 46 65.2
COL.COLO4_11595 Corchorus olitorius HOM05D007502 ORTHO05D010230 7.4e-06 53.9 74 51.4
Lj2g0008607 Lotus japonicus HOM05D007502 ORTHO05D010230 7.4e-06 53.9 85 43.5
Actinidia36426 Actinidia chinensis HOM05D001896 ORTHO05D001862 9.7e-06 53.5 85 48.2
RcHm_v2.0_Chr2g0108411 Rosa chinensis HOM05D007502 ORTHO05D010230 9.7e-06 53.5 59 59.3


User provided reference genes

Program Settings