Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003117g0010 Nicotiana tabacum HOM05D010238 ORTHO05D010031 5.5e-124 447.6 217 100.0
Solyc08g067700.1 Solanum lycopersicum HOM05D010238 ORTHO05D010031 1.0e-69 267.3 240 60.8
Nitab4.5_0007456g0010 Nicotiana tabacum HOM05D010238 ORTHO05D010031 5.8e-57 224.9 156 75.6
Nitab4.5_0000125g0370 Nicotiana tabacum HOM05D010238 ORTHO05D010031 5.5e-39 165.2 103 81.6
Ciclev10010677m.g Citrus clementina HOM05D010238 ORTHO05D010031 1.1e-26 124.4 200 40.5
FAN10G1930 Fragaria x ananassa HOM05D010238 ORTHO05D010031 4.2e-23 112.5 158 42.4
Prupe.1G469600 Prunus persica HOM05D010238 ORTHO05D010031 5.5e-23 112.1 227 34.4
Prupe.1G469500 Prunus persica HOM05D010238 ORTHO05D010031 9.3e-23 111.3 242 33.9
Prupe.1G470100 Prunus persica HOM05D010238 ORTHO05D010031 3.6e-22 109.4 223 34.5
Hma1.2p1_0175F.1_g077090 Hydrangea macrophylla HOM05D010238 ORTHO05D010031 4.6e-22 109.0 198 34.8
FAN06G3436 Fragaria x ananassa HOM05D010238 ORTHO05D010031 1.0e-21 107.8 158 42.4
Prupe.1G469800 Prunus persica HOM05D010238 ORTHO05D010031 1.8e-21 107.1 235 34.0
Prupe.1G470400 Prunus persica HOM05D010238 ORTHO05D010031 5.7e-20 102.1 234 32.1
Prupe.1G470600 Prunus persica HOM05D010238 ORTHO05D010031 9.7e-20 101.3 232 34.5
Actinidia13276 Actinidia chinensis HOM05D010238 ORTHO05D010031 5.3e-18 95.5 83 54.2
MD15G1112200 Malus domestica HOM05D010238 ORTHO05D010031 2.6e-17 93.2 106 47.2
MD15G1111300 Malus domestica HOM05D010238 ORTHO05D010031 2.2e-16 90.1 225 29.3
Cfa012265 Carpinus fangiana HOM05D010605 ORTHO05D010031 4.2e-15 85.9 201 30.3
Hma1.2p1_0216F.1_g091240 Hydrangea macrophylla HOM05D010605 ORTHO05D010031 4.6e-14 82.4 193 31.1
Haze_08721 Corylus avellana HOM05D010605 ORTHO05D010031 7.9e-14 81.6 189 30.2
Dinv37573 Davidia involucrata HOM05D010605 ORTHO05D010031 2.3e-13 80.1 180 31.1
Haze_08723 Corylus avellana HOM05D010605 ORTHO05D010031 5.1e-13 79.0 191 29.8
Haze_08725 Corylus avellana HOM05D010605 ORTHO05D010031 5.1e-13 79.0 194 28.9
Prupe.1G470500 Prunus persica HOM05D010238 ORTHO05D010031 5.1e-13 79.0 88 47.7
Cfa012264 Carpinus fangiana HOM05D010605 ORTHO05D010031 1.5e-12 77.4 197 28.9
Rhsim02G0192000 Rhododendron simsii HOM05D010927 ORTHO05D010031 1.5e-12 77.4 202 27.7
Rhsim02G0190400 Rhododendron simsii HOM05D010927 ORTHO05D010031 3.3e-12 76.3 176 31.8
TPR.G15657 Trifolium pratense HOM05D000890 ORTHO05D000697 3.3e-12 76.3 87 46.0
TPR.G23939 Trifolium pratense HOM05D010238 ORTHO05D010031 3.3e-12 76.3 102 40.2
QL02p032625 Quercus lobata HOM05D010605 ORTHO05D010031 4.4e-12 75.9 173 31.2
QL02p008501 Quercus lobata HOM05D020907 ORTHO05D010031 1.7e-11 73.9 85 48.2
Lj8P215T31 Lonicera japonica HOM05D010605 ORTHO05D010031 2.8e-11 73.2 189 30.2
Actinidia28329 Actinidia chinensis HOM05D010605 ORTHO05D010031 8.2e-11 71.6 81 44.4
CiPaw.11G127100 Carya illinoinensis HOM05D010605 ORTHO05D010031 1.4e-10 70.9 176 27.3
CiPaw.12G087500 Carya illinoinensis HOM05D010605 ORTHO05D010031 1.8e-10 70.5 164 30.5
Rhsim02G0192200 Rhododendron simsii HOM05D010927 ORTHO05D010031 1.8e-10 70.5 80 48.8
Rhsim02G0190000 Rhododendron simsii HOM05D010927 ORTHO05D010031 2.4e-10 70.1 155 33.5
QL10p010801 Quercus lobata HOM05D020907 ORTHO05D010031 5.3e-10 68.9 156 32.7
CSS0007858 Camellia sinensis var. sinensis HOM05D010605 ORTHO05D010031 6.9e-10 68.6 183 28.4
CiPaw.11G127200 Carya illinoinensis HOM05D010605 ORTHO05D010031 9.1e-10 68.2 183 29.0
CiPaw.12G087400 Carya illinoinensis HOM05D010605 ORTHO05D010031 9.1e-10 68.2 172 29.1
Dinv08500 Davidia involucrata HOM05D010605 ORTHO05D010031 1.2e-09 67.8 87 43.7
Haze_08724 Corylus avellana HOM05D010605 ORTHO05D010031 1.5e-09 67.4 192 27.1
Haze_08727 Corylus avellana HOM05D010605 ORTHO05D010031 1.5e-09 67.4 192 27.1
Peaxi162Scf00251g00014 Petunia axillaris HOM05D010238 ORTHO05D010031 1.5e-09 67.4 43 69.8
Oeu027789.1 Olea europaea HOM05D010238 ORTHO05D010031 5.9e-09 65.5 192 29.7
RhsimUnG0204100 Rhododendron simsii HOM05D010927 ORTHO05D010031 5.9e-09 65.5 80 42.5
RhsimUnG0218700 Rhododendron simsii HOM05D010927 ORTHO05D010031 7.7e-09 65.1 76 46.1
RhsimUnG0144500 Rhododendron simsii HOM05D010927 ORTHO05D010031 1.7e-08 63.9 80 41.2
QL10p009726 Quercus lobata HOM05D020907 ORTHO05D010031 2.2e-08 63.5 168 31.0
QL10p009746 Quercus lobata HOM05D020907 ORTHO05D010031 2.9e-08 63.2 168 31.0
QL10p009756 Quercus lobata HOM05D020907 ORTHO05D010031 2.9e-08 63.2 168 31.0
RhsimUnG0071700 Rhododendron simsii HOM05D010927 ORTHO05D010031 5.0e-08 62.4 92 38.0
CDE10G0521 Ceratophyllum demersum HOM05D003548 ORTHO05D004066 7.2e-07 58.5 85 30.6
QL10p009707 Quercus lobata HOM05D020907 ORTHO05D010031 7.2e-07 58.5 168 29.8
Cc06_g13000 Coffea canephora HOM05D010238 ORTHO05D010031 1.2e-06 57.8 72 43.1
Migut.A00288 Erythranthe guttata HOM05D007454 ORTHO05D009382 2.7e-06 56.6 94 37.2


User provided reference genes

Program Settings