Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003114g0110 Nicotiana tabacum HOM05D007756 ORTHO05D009403 6.9e-37 156.8 77 100.0
Nitab4.5_0001170g0030 Nicotiana tabacum HOM05D007756 ORTHO05D009403 1.1e-26 122.9 76 84.2
PGSC0003DMG400022448 Solanum tuberosum HOM05D007756 ORTHO05D009403 7.9e-17 90.1 55 83.6
Solyc02g078890.1 Solanum lycopersicum HOM05D007756 ORTHO05D009403 1.5e-15 85.9 55 78.2
Sopen02g023700 Solanum pennellii HOM05D007756 ORTHO05D009403 1.5e-15 85.9 55 78.2
PGSC0003DMG400022449 Solanum tuberosum HOM05D007756 ORTHO05D009403 5.3e-13 77.4 49 85.7
Solyc02g078870.1 Solanum lycopersicum HOM05D007756 ORTHO05D009403 9.1e-13 76.6 49 85.7
PGSC0003DMG400022450 Solanum tuberosum HOM05D007756 ORTHO05D009403 9.1e-13 76.6 49 85.7
CSS0020554 Camellia sinensis var. sinensis HOM05D007756 ORTHO05D009403 3.6e-09 64.7 49 65.3
CSS0041901 Camellia sinensis var. sinensis HOM05D007756 ORTHO05D009403 3.6e-09 64.7 49 65.3
Hma1.2p1_0144F.1_g064970 Hydrangea macrophylla HOM05D007756 ORTHO05D009403 6.1e-09 63.9 51 66.7
Gohir.D10G020250 Gossypium hirsutum HOM05D007756 ORTHO05D009403 7.9e-09 63.5 57 61.4
Hma1.2p1_0144F.1_g064960 Hydrangea macrophylla HOM05D007756 ORTHO05D009403 7.9e-09 63.5 51 66.7
Cfa000371 Carpinus fangiana HOM05D007756 ORTHO05D009403 1.4e-08 62.8 52 65.4
Cc02_g12640 Coffea canephora HOM05D007756 ORTHO05D009403 1.4e-08 62.8 51 64.7
Gohir.A10G019400 Gossypium hirsutum HOM05D007756 ORTHO05D009403 2.3e-08 62.0 57 59.6
Gohir.D10G020400 Gossypium hirsutum HOM05D007756 ORTHO05D009403 2.3e-08 62.0 49 69.4
Glyma.08G057900 Glycine max HOM05D007756 ORTHO05D009403 3.0e-08 61.6 49 69.4
Glyma.07G191400 Glycine max HOM05D007756 ORTHO05D009403 3.9e-08 61.2 49 67.3
Gohir.A10G019600 Gossypium hirsutum HOM05D007756 ORTHO05D009403 5.1e-08 60.8 49 67.3
Hma1.2p1_0144F.1_g064980 Hydrangea macrophylla HOM05D007756 ORTHO05D009403 8.8e-08 60.1 51 58.8
Potri.004G036350 Populus trichocarpa HOM05D007756 ORTHO05D009403 2.0e-07 58.9 53 58.5
Potri.011G044800 Populus trichocarpa HOM05D007756 ORTHO05D009403 2.0e-07 58.9 49 59.2
Gohir.A05G164200 Gossypium hirsutum HOM05D007756 ORTHO05D009403 2.6e-07 58.5 49 63.3
Gorai.009G172100 Gossypium raimondii HOM05D007756 ORTHO05D009403 2.6e-07 58.5 49 63.3
Ca_18499_v3 Cicer arietinum L. HOM05D007756 ORTHO05D009403 3.3e-07 58.2 51 60.8
TPR.G32425 Trifolium pratense HOM05D007756 ORTHO05D009403 3.3e-07 58.2 54 55.6
CiPaw.10G120500 Carya illinoinensis HOM05D007756 ORTHO05D009403 4.4e-07 57.8 51 58.8
CiPaw.10G120600 Carya illinoinensis HOM05D007756 ORTHO05D009403 7.4e-07 57.0 49 63.3
FAN16G3405 Fragaria x ananassa HOM05D007756 ORTHO05D009403 9.7e-07 56.6 62 50.0
Manes.16G038800 Manihot esculenta HOM05D007756 ORTHO05D009403 9.7e-07 56.6 59 57.6
FAN11G3808 Fragaria x ananassa HOM05D007756 ORTHO05D009403 1.3e-06 56.2 62 50.0
Manes.16G022400 Manihot esculenta HOM05D007756 ORTHO05D009403 1.3e-06 56.2 49 63.3
BcaB03g13271 Brassica carinata HOM05D015938 ORTHO05D009403 1.7e-06 55.8 52 59.6
BcaB03g13272 Brassica carinata HOM05D015938 ORTHO05D009403 1.7e-06 55.8 52 59.6
Gohir.D05G167100 Gossypium hirsutum HOM05D007756 ORTHO05D009403 1.7e-06 55.8 49 61.2
Lsat_1_v5_gn_1_124981 Lactuca sativa HOM05D007756 ORTHO05D009403 1.7e-06 55.8 52 53.8
Thecc.06G196200 Theobroma cacao HOM05D007756 ORTHO05D009403 1.7e-06 55.8 49 61.2
RcHm_v2.0_Chr5g0006811 Rosa chinensis HOM05D007756 ORTHO05D009403 2.2e-06 55.5 45 62.2
VMungo0251G2707 Vigna mungo HOM05D007756 ORTHO05D009403 2.2e-06 55.5 49 65.3
Ciclev10017421m.g Citrus clementina HOM05D007756 ORTHO05D009403 2.8e-06 55.1 53 62.3
Migut.H01494 Erythranthe guttata HOM05D007756 ORTHO05D009403 2.8e-06 55.1 44 61.4
Lalb_Chr05g0218241 Lupinus albus HOM05D007756 ORTHO05D009403 3.7e-06 54.7 52 63.5
Manes.17G040600 Manihot esculenta HOM05D007756 ORTHO05D009403 3.7e-06 54.7 49 65.3
Ah.09g235940 Amaranthus hybridus HOM05D032808 ORTHO05D009403 4.8e-06 54.3 53 52.8
Medtr4g090545 Medicago truncatula HOM05D007756 ORTHO05D009403 4.8e-06 54.3 51 56.9
BcaC07g38642 Brassica carinata HOM05D015938 ORTHO05D009403 6.3e-06 53.9 52 57.7
BolC8t49053H Brassica oleracea HOM05D015938 ORTHO05D009403 6.3e-06 53.9 52 57.7
BraA08t35278Z Brassica rapa HOM05D015938 ORTHO05D009403 6.3e-06 53.9 52 57.7
Aqoxy1G02679 Aquilegia oxysepala HOM05D007756 ORTHO05D009403 8.2e-06 53.5 49 59.2
Phvul.002G223500 Phaseolus vulgaris HOM05D007756 ORTHO05D009403 8.2e-06 53.5 49 61.2
Rhsim02G0120600 Rhododendron simsii HOM05D032808 ORTHO05D009403 8.2e-06 53.5 38 65.8


User provided reference genes

Program Settings