Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003114g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.6e-91 338.2 166 100.0
Nitab4.5_0005092g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.5e-62 241.9 181 71.3
Nitab4.5_0002951g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.3e-60 234.2 196 68.9
Nitab4.5_0006009g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.8e-51 205.7 200 59.5
Nitab4.5_0012894g0030 Nicotiana tabacum HOM05D006864 ORTHO05D000013 2.0e-33 146.4 199 50.3
Nitab4.5_0004697g0110 Nicotiana tabacum HOM05D006864 ORTHO05D000013 5.8e-33 144.8 200 49.0
Nitab4.5_0005199g0100 Nicotiana tabacum HOM05D006864 ORTHO05D000013 7.1e-31 137.9 110 65.5
Nitab4.5_0003869g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.0e-24 115.2 166 45.8
Nitab4.5_0005474g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.4e-24 114.4 109 59.6
Nitab4.5_0002993g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.7e-19 99.0 184 35.3
Nitab4.5_0000814g0120 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.3e-19 98.2 191 32.5
Nitab4.5_0006936g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.3e-19 98.2 185 34.6
Nitab4.5_0008359g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.1e-18 97.4 193 32.6
Nitab4.5_0004295g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.8e-18 96.7 156 37.8
Nitab4.5_0001212g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.3e-18 95.1 159 37.7
Nitab4.5_0001947g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.3e-18 95.1 159 36.5
Nitab4.5_0007005g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.9e-18 94.7 193 31.6
Nitab4.5_0000036g0400 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.0e-17 93.2 198 34.8
Nitab4.5_0003674g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.0e-17 93.2 186 32.8
Nitab4.5_0001816g0240 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.4e-17 92.4 179 31.8
Nitab4.5_0003887g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.5e-17 92.0 213 33.3
Nitab4.5_0004728g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.5e-17 92.0 192 31.8
Nitab4.5_0002279g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.7e-17 91.3 211 31.8
Nitab4.5_0001968g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.8e-16 89.0 193 29.5
Nitab4.5_0002461g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.8e-16 89.0 155 38.1
Nitab4.5_0005249g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.0e-16 88.6 184 34.2
Nitab4.5_0010143g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.0e-16 88.6 148 37.2
Nitab4.5_0004917g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.5e-16 88.2 193 32.1
Nitab4.5_0000034g0050 Nicotiana tabacum HOM05D008401 ORTHO05D002765 8.5e-16 87.8 184 33.2
Nitab4.5_0000730g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.5e-16 87.8 174 35.6
Nitab4.5_0003586g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.5e-16 87.8 162 33.3
Nitab4.5_0005474g0070 Nicotiana tabacum HOM05D006864 ORTHO05D011903 1.1e-15 87.4 57 78.9
Solyc10g052716.1 Solanum lycopersicum HOM05D000017 ORTHO05D002765 1.4e-15 87.0 260 25.4
Nitab4.5_0000721g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.9e-15 86.7 193 30.1
Nitab4.5_0004824g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.2e-15 85.9 162 34.6
Nitab4.5_0006179g0060 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.2e-15 85.5 155 36.1
Nitab4.5_0000403g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 7.2e-15 84.7 181 29.3
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 7.2e-15 84.7 260 25.0
Nitab4.5_0000890g0220 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.4e-15 84.3 206 33.0
Nitab4.5_0007303g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.6e-14 83.6 193 33.7
Nitab4.5_0027852g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.6e-14 83.6 189 31.2
Nitab4.5_0006628g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.6e-14 82.4 193 30.1
Nitab4.5_0014828g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.6e-14 82.0 171 32.2
Nitab4.5_0002534g0090 Nicotiana tabacum HOM05D008401 ORTHO05D002765 7.9e-14 81.3 188 28.7
Nitab4.5_0002806g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.0e-13 80.9 182 31.3
Nitab4.5_0004899g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-13 80.5 150 34.0
Nitab4.5_0024513g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.4e-13 80.5 187 31.6
Nitab4.5_0002430g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.3e-13 79.7 181 28.7
Nitab4.5_0005376g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.0e-13 79.3 168 33.9
Nitab4.5_0000423g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.1e-13 78.6 192 28.6
Nitab4.5_0000516g0080 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.1e-13 78.6 193 27.5
Nitab4.5_0001030g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.1e-13 78.6 179 29.1
Nitab4.5_0007904g0040 Nicotiana tabacum HOM05D006864 ORTHO05D000013 5.1e-13 78.6 50 80.0
Nitab4.5_0001614g0160 Nicotiana tabacum HOM05D008401 ORTHO05D002765 6.7e-13 78.2 181 30.4
Nitab4.5_0003966g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 6.7e-13 78.2 182 30.2
Nitab4.5_0001140g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 8.8e-13 77.8 180 31.1
Nitab4.5_0012915g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.1e-12 77.4 185 28.1
Nitab4.5_0008791g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.5e-12 76.3 178 30.3
Sopen05g022560 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-12 76.3 190 26.3
Nitab4.5_0004449g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.3e-12 75.9 157 30.6
Nitab4.5_0002297g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.3e-12 75.5 172 32.6
CANSAT78G0321 Cannabis sativa HOM05D010396 ORTHO05D002765 5.7e-12 75.1 239 24.7
Solyc09g150133.1 Solanum lycopersicum HOM05D007248 ORTHO05D002765 9.7e-12 74.3 190 26.3
Nitab4.5_0003767g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.3e-11 73.9 186 28.5
Sopen06g004330 Solanum pennellii HOM05D000017 ORTHO05D000013 1.3e-11 73.9 190 28.4
CANSAT21G0992 Cannabis sativa HOM05D010396 ORTHO05D002765 2.2e-11 73.2 239 24.7
Nitab4.5_0000008g0780 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.8e-11 72.8 158 32.3
Nitab4.5_0009921g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.8e-11 72.8 112 33.9
Nitab4.5_0001259g0140 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.8e-11 72.0 150 31.3
Sopen05g006380 Solanum pennellii HOM05D000017 ORTHO05D000013 6.3e-11 71.6 190 27.9
CANSAT25G1145 Cannabis sativa HOM05D000017 ORTHO05D000013 8.2e-11 71.2 170 30.6
Nitab4.5_0000832g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.1e-10 70.9 174 29.9
Nitab4.5_0001439g0140 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.4e-10 70.5 174 28.7
Nitab4.5_0004510g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.4e-10 70.5 138 34.8
CANSAT21G1471 Cannabis sativa HOM05D000017 ORTHO05D000013 2.4e-10 69.7 170 30.0
Nitab4.5_0012303g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.4e-10 69.7 118 39.0
CANSAT35G1872 Cannabis sativa HOM05D000017 ORTHO05D000013 4.1e-10 68.9 170 29.4
Nitab4.5_0001094g0180 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.1e-10 68.9 166 31.3
Nitab4.5_0003089g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.1e-10 68.9 171 28.1
Sopen02g001070 Solanum pennellii HOM05D000017 ORTHO05D000013 4.1e-10 68.9 190 27.4
Sopen02g032130 Solanum pennellii HOM05D000629 ORTHO05D000013 4.1e-10 68.9 190 27.4
Sopen12g019990 Solanum pennellii HOM05D000017 ORTHO05D000013 4.1e-10 68.9 190 27.4
Sopen10g005080 Solanum pennellii HOM05D000017 ORTHO05D000013 5.3e-10 68.6 190 26.8
Sopen06g002940 Solanum pennellii HOM05D000017 ORTHO05D000013 6.9e-10 68.2 190 27.4
Nitab4.5_0000662g0100 Nicotiana tabacum HOM05D008401 ORTHO05D002765 9.1e-10 67.8 140 27.9
Nitab4.5_0000786g0280 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.1e-10 67.8 176 27.8
Nitab4.5_0006446g0050 Nicotiana tabacum HOM05D008401 ORTHO05D002765 9.1e-10 67.8 139 29.5
Sopen11g019130 Solanum pennellii HOM05D000047 ORTHO05D000589 9.1e-10 67.8 153 30.7
Nitab4.5_0000697g0250 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-09 67.4 95 37.9
Nitab4.5_0010494g0010 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-09 67.4 119 35.3
Nitab4.5_0003288g0080 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.5e-09 67.0 181 26.0
Nitab4.5_0007069g0020 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.5e-09 67.0 189 29.1
Sopen01g015850 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-09 67.0 152 28.9
Sopen09g007640 Solanum pennellii HOM05D000017 ORTHO05D000013 2.0e-09 66.6 191 28.3
Nitab4.5_0011275g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.6e-09 66.2 183 27.3
Nitab4.5_0000425g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.4e-09 65.9 166 30.1
Nitab4.5_0001173g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.4e-09 65.9 108 35.2
Nitab4.5_0001863g0150 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.7e-09 64.7 108 35.2
Sopen10g022230 Solanum pennellii HOM05D000017 ORTHO05D000013 7.7e-09 64.7 153 30.1
Nitab4.5_0013596g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.0e-08 64.3 108 35.2
Nitab4.5_0020188g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.0e-08 64.3 174 27.6
Nitab4.5_0000374g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.2e-08 63.2 155 28.4
SGA_v2.0_scaffold122G33338 Striga asiatica HOM05D000196 ORTHO05D010161 2.9e-08 62.8 166 25.3
Nitab4.5_0000906g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.8e-08 62.4 107 37.4
CANSAT56G1010 Cannabis sativa HOM05D000017 ORTHO05D000013 6.5e-08 61.6 162 24.1
Nitab4.5_0000227g0040 Nicotiana tabacum HOM05D006864 ORTHO05D011903 6.5e-08 61.6 94 41.5
Oeu019782.1 Olea europaea HOM05D012404 ORTHO05D002765 6.5e-08 61.6 176 28.4
CANSAT78G0529 Cannabis sativa HOM05D010396 ORTHO05D002765 8.5e-08 61.2 133 27.1
Nitab4.5_0000584g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.5e-08 61.2 97 36.1
Nitab4.5_0000829g0130 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.5e-08 61.2 162 30.2
Nitab4.5_0008542g0060 Nicotiana tabacum HOM05D006864 ORTHO05D000013 8.5e-08 61.2 36 80.6
Sopen09g012340 Solanum pennellii HOM05D006864 ORTHO05D000013 8.5e-08 61.2 190 25.3
Sopen01g037270 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-07 60.8 192 27.6
Sopen03g030620 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-07 60.8 192 26.6
Sopen11g029160 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-07 60.8 192 27.6
Nitab4.5_0003408g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-07 60.5 172 30.2
Nitab4.5_0003911g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-07 60.5 108 34.3
Nitab4.5_0000231g0410 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.9e-07 60.1 175 27.4
CANSAT01G2679 Cannabis sativa HOM05D010396 ORTHO05D002765 3.2e-07 59.3 133 27.1
CANSAT25G3317 Cannabis sativa HOM05D010396 ORTHO05D002765 3.2e-07 59.3 133 27.1
CANSAT64G2574 Cannabis sativa HOM05D010396 ORTHO05D002765 3.2e-07 59.3 133 27.1
Nitab4.5_0012202g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.2e-07 59.3 79 38.0
Oeu016698.1 Olea europaea HOM05D000017 ORTHO05D000013 3.2e-07 59.3 176 26.1
Nitab4.5_0017446g0010 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.2e-07 58.9 62 43.5
Nitab4.5_0002944g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.5e-07 58.5 99 35.4
Peaxi162Scf01226g00018 Petunia axillaris HOM05D006864 ORTHO05D000013 5.5e-07 58.5 146 27.4
Sopen08g017470 Solanum pennellii HOM05D000017 ORTHO05D000013 5.5e-07 58.5 176 27.8
Sopen06g004080 Solanum pennellii HOM05D000017 ORTHO05D000013 7.2e-07 58.2 192 26.6
CANSAT35G0692 Cannabis sativa HOM05D010396 ORTHO05D002765 9.4e-07 57.8 190 25.8
Nitab4.5_0000904g0120 Nicotiana tabacum HOM05D009153 ORTHO05D011903 1.2e-06 57.4 52 51.9
Nitab4.5_0002397g0060 Nicotiana tabacum HOM05D009153 ORTHO05D011903 1.2e-06 57.4 55 49.1
Nitab4.5_0007528g0020 Nicotiana tabacum HOM05D009153 ORTHO05D011903 1.2e-06 57.4 57 47.4
Oeu009493.1 Olea europaea HOM05D012404 ORTHO05D002765 1.2e-06 57.4 180 26.1
CANSAT01G2588 Cannabis sativa HOM05D000017 ORTHO05D000013 1.6e-06 57.0 76 43.4
Oeu059246.1 Olea europaea HOM05D012404 ORTHO05D002765 2.1e-06 56.6 178 25.3
Peaxi162Scf00827g00217 Petunia axillaris HOM05D009153 ORTHO05D011903 2.1e-06 56.6 55 49.1
Nitab4.5_0000461g0060 Nicotiana tabacum HOM05D009153 ORTHO05D011903 2.7e-06 56.2 56 48.2
Sopen12g026640 Solanum pennellii HOM05D007248 ORTHO05D002765 3.6e-06 55.8 165 26.1
CAN.G1079.3 Capsicum annuum HOM05D007248 ORTHO05D002765 4.7e-06 55.5 118 33.1
DCAR_015925 Daucus carota HOM05D006864 ORTHO05D002765 4.7e-06 55.5 129 27.1
Nitab4.5_0000228g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.7e-06 55.5 69 40.6
Nitab4.5_0001410g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.7e-06 55.5 54 51.9
Nitab4.5_0001591g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 6.1e-06 55.1 149 25.5
Nitab4.5_0000026g0270 Nicotiana tabacum HOM05D008401 ORTHO05D002765 7.9e-06 54.7 110 34.5
Nitab4.5_0000797g0070 Nicotiana tabacum HOM05D009153 ORTHO05D011903 7.9e-06 54.7 54 50.0
Nitab4.5_0006375g0060 Nicotiana tabacum HOM05D000017 ORTHO05D002765 7.9e-06 54.7 109 32.1
Nitab4.5_0007029g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 7.9e-06 54.7 154 24.0
Nitab4.5_0010096g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.9e-06 54.7 60 41.7


User provided reference genes

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