Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003114g0070 Nicotiana tabacum HOM05D008646 ORTHO05D010739 8.8e-91 337.0 182 100.0
Nitab4.5_0002875g0020 Nicotiana tabacum HOM05D008646 ORTHO05D010739 2.1e-76 289.3 182 89.0
Nitab4.5_0001069g0010 Nicotiana tabacum HOM05D008646 ORTHO05D010739 2.2e-73 279.3 179 84.9
Nitab4.5_0005553g0010 Nicotiana tabacum HOM05D008646 ORTHO05D010739 2.8e-73 278.9 179 82.1
Nitab4.5_0002446g0140 Nicotiana tabacum HOM05D008646 ORTHO05D010739 1.1e-72 276.9 181 85.1
Nitab4.5_0003233g0060 Nicotiana tabacum HOM05D008646 ORTHO05D010739 2.4e-72 275.8 182 86.3
Nitab4.5_0001732g0040 Nicotiana tabacum HOM05D008646 ORTHO05D010739 2.7e-71 272.3 181 78.5
Nitab4.5_0003212g0040 Nicotiana tabacum HOM05D008646 ORTHO05D010739 2.9e-70 268.9 179 82.7
Nitab4.5_0004855g0040 Nicotiana tabacum HOM05D008646 ORTHO05D010739 3.8e-70 268.5 181 76.2
Nitab4.5_0006237g0050 Nicotiana tabacum HOM05D008646 ORTHO05D010739 7.2e-69 264.2 181 75.1
Nitab4.5_0004782g0040 Nicotiana tabacum HOM05D008646 ORTHO05D010739 1.6e-68 263.1 179 82.1
Nitab4.5_0009203g0010 Nicotiana tabacum HOM05D008646 ORTHO05D010739 3.6e-68 261.9 181 75.1
Nitab4.5_0004313g0010 Nicotiana tabacum HOM05D008646 ORTHO05D010739 1.8e-67 259.6 181 76.2
Nitab4.5_0005164g0060 Nicotiana tabacum HOM05D008646 ORTHO05D010739 1.8e-67 259.6 169 87.0
Nitab4.5_0003947g0010 Nicotiana tabacum HOM05D008646 ORTHO05D010739 2.3e-67 259.2 181 70.7
Nitab4.5_0005483g0050 Nicotiana tabacum HOM05D008646 ORTHO05D010739 1.2e-66 256.9 182 75.8
Nitab4.5_0001500g0050 Nicotiana tabacum HOM05D008646 ORTHO05D010739 7.5e-66 254.2 140 88.6
Nitab4.5_0000102g0430 Nicotiana tabacum HOM05D008646 ORTHO05D010739 1.6e-63 246.5 184 75.5
Nitab4.5_0005770g0020 Nicotiana tabacum HOM05D008646 ORTHO05D010739 2.0e-63 246.1 181 72.4
Nitab4.5_0009418g0030 Nicotiana tabacum HOM05D008646 ORTHO05D010739 2.7e-63 245.7 182 77.5
Nitab4.5_0028952g0010 Nicotiana tabacum HOM05D008646 ORTHO05D010739 3.5e-63 245.4 191 72.3
Nitab4.5_0012244g0010 Nicotiana tabacum HOM05D008646 ORTHO05D010739 4.7e-60 235.0 184 69.6
Nitab4.5_0001456g0160 Nicotiana tabacum HOM05D008646 ORTHO05D010739 1.0e-59 233.8 187 71.7
Nitab4.5_0001977g0070 Nicotiana tabacum HOM05D008646 ORTHO05D010739 9.2e-56 220.7 140 76.4
Nitab4.5_0000237g0020 Nicotiana tabacum HOM05D008646 ORTHO05D010739 3.5e-55 218.8 140 75.7
Nitab4.5_0000863g0220 Nicotiana tabacum HOM05D008646 ORTHO05D010739 3.5e-55 218.8 175 70.9
Nitab4.5_0000496g0110 Nicotiana tabacum HOM05D008646 ORTHO05D010739 3.0e-54 215.7 140 74.3
Nitab4.5_0004085g0040 Nicotiana tabacum HOM05D008646 ORTHO05D010739 9.5e-53 210.7 140 72.1
Nitab4.5_0003745g0050 Nicotiana tabacum HOM05D008646 ORTHO05D010739 5.8e-50 201.4 112 87.5
Nitab4.5_0002703g0010 Nicotiana tabacum HOM05D008646 ORTHO05D010739 8.3e-49 197.6 159 71.1
Nitab4.5_0000578g0210 Nicotiana tabacum HOM05D008646 ORTHO05D010739 3.3e-37 159.1 185 57.3
Nitab4.5_0014964g0010 Nicotiana tabacum HOM05D008646 ORTHO05D010739 5.6e-37 158.3 121 71.9
Nitab4.5_0004378g0050 Nicotiana tabacum HOM05D008646 ORTHO05D010739 7.6e-34 147.9 138 68.8
Nitab4.5_0008939g0030 Nicotiana tabacum HOM05D008646 ORTHO05D010739 7.6e-34 147.9 125 74.4
Nitab4.5_0007080g0020 Nicotiana tabacum HOM05D008646 ORTHO05D010739 3.5e-31 139.0 106 82.1
Nitab4.5_0000276g0170 Nicotiana tabacum HOM05D008646 ORTHO05D010739 7.8e-31 137.9 99 69.7
Nitab4.5_0011277g0030 Nicotiana tabacum HOM05D008646 ORTHO05D010739 7.3e-29 131.3 84 77.4
Nitab4.5_0001687g0090 Nicotiana tabacum HOM05D008646 ORTHO05D010739 6.2e-28 128.3 105 67.6
Nitab4.5_0000139g0040 Nicotiana tabacum HOM05D008646 ORTHO05D010739 2.4e-27 126.3 115 68.7
Nitab4.5_0002327g0050 Nicotiana tabacum HOM05D008646 ORTHO05D010739 6.9e-27 124.8 103 76.7
Nitab4.5_0000666g0090 Nicotiana tabacum HOM05D008646 ORTHO05D010739 1.7e-25 120.2 85 69.4
Nitab4.5_0005106g0030 Nicotiana tabacum HOM05D008646 ORTHO05D010739 3.2e-24 115.9 96 82.3
Nitab4.5_0000692g0130 Nicotiana tabacum HOM05D008646 ORTHO05D010739 5.4e-16 88.6 55 76.4
TWI18G0509 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 3.0e-14 82.8 180 26.7
TWI63G0135 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 8.7e-14 81.3 178 27.0
MELO3C007522.2 Cucumis melo HOM05D007907 ORTHO05D009079 1.5e-13 80.5 175 28.0
TWI77G0435 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 1.9e-13 80.1 178 27.0
TWI18G0445 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.5e-13 79.7 180 30.0
TWI39G0946 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.5e-13 79.7 180 30.0
TWI63G1251 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.5e-13 79.7 180 30.0
TWI77G0850 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.5e-13 79.7 180 30.0
Ciclev10007144m.g Citrus clementina HOM05D007816 ORTHO05D000482 5.6e-13 78.6 184 28.8
TWI75G0551 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 2.1e-12 76.6 178 25.8
TWI79G1717 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.6e-12 75.9 178 27.0
TWI18G0429 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 4.8e-12 75.5 178 27.0
TWI38G0813 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 4.8e-12 75.5 178 27.0
TWI53G0735 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 4.8e-12 75.5 178 27.0
CANSAT80G2675 Cannabis sativa HOM05D002262 ORTHO05D000482 6.2e-12 75.1 167 28.1
TWI32G0457 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 6.2e-12 75.1 178 27.0
PSO151G0021 Papaver somniferum HOM05D010112 ORTHO05D000397 8.1e-12 74.7 180 28.3
TWI18G0558 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 8.1e-12 74.7 178 27.0
TWI63G0551 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 8.1e-12 74.7 178 27.0
TWI12G0965 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 1.1e-11 74.3 189 27.0
TWI74G1109 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 1.1e-11 74.3 179 29.1
Ciclev10019150m.g Citrus clementina HOM05D007816 ORTHO05D000482 1.8e-11 73.6 173 28.9
Ciclev10020564m.g Citrus clementina HOM05D007816 ORTHO05D000397 1.8e-11 73.6 170 28.2
CsaV3_6G042820 Cucumis sativus L. HOM05D007907 ORTHO05D009079 1.8e-11 73.6 175 26.3
PSO063G4195 Papaver somniferum HOM05D007816 ORTHO05D000397 1.8e-11 73.6 181 28.7
TWI38G1257 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.8e-11 73.6 177 26.6
CANSAT80G0150 Cannabis sativa HOM05D002262 ORTHO05D000482 2.4e-11 73.2 165 27.9
Ciclev10017905m.g Citrus clementina HOM05D007816 ORTHO05D000482 2.4e-11 73.2 187 28.9
PSO421G0071 Papaver somniferum HOM05D007816 ORTHO05D000397 2.4e-11 73.2 181 28.2
TWI36G1743 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.4e-11 73.2 177 26.6
CANSAT56G4305 Cannabis sativa HOM05D002262 ORTHO05D000482 4.0e-11 72.4 136 32.4
CANSAT11G1281 Cannabis sativa HOM05D002262 ORTHO05D000482 5.3e-11 72.0 165 29.1
CANSAT25G2067 Cannabis sativa HOM05D002262 ORTHO05D000482 5.3e-11 72.0 165 29.1
CANSAT01G2439 Cannabis sativa HOM05D002262 ORTHO05D000482 3.4e-10 69.3 165 28.5
CsaV3_1G032310 Cucumis sativus L. HOM05D010240 ORTHO05D000482 3.4e-10 69.3 186 28.0
CsaV3_6G008220 Cucumis sativus L. HOM05D010240 ORTHO05D000482 3.4e-10 69.3 186 28.0
Sopen06g015940 Solanum pennellii HOM05D000679 ORTHO05D000482 3.4e-10 69.3 168 29.8
MELO3C028279.2 Cucumis melo HOM05D007907 ORTHO05D009079 4.5e-10 68.9 182 28.6
MELO3C029044.2 Cucumis melo HOM05D007907 ORTHO05D009079 7.6e-10 68.2 180 28.3
MELO3C033233.2 Cucumis melo HOM05D007907 ORTHO05D009079 9.9e-10 67.8 144 29.9
Sopen07g022050 Solanum pennellii HOM05D000679 ORTHO05D000482 9.9e-10 67.8 177 27.7
CANSAT54G2680 Cannabis sativa HOM05D002262 ORTHO05D000482 1.3e-09 67.4 189 25.4
TWI12G1016 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.3e-09 67.4 160 26.9
Nitab4.5_0001299g0110 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.7e-09 67.0 176 26.1
CANSAT01G1167 Cannabis sativa HOM05D008721 ORTHO05D000482 2.2e-09 66.6 167 26.3
CANSAT54G0758 Cannabis sativa HOM05D002262 ORTHO05D000482 2.2e-09 66.6 178 27.5
Nitab4.5_0013466g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.2e-09 66.6 176 27.3
CANSAT64G1718 Cannabis sativa HOM05D017160 ORTHO05D000137 2.9e-09 66.2 188 25.0
CANSAT80G1500 Cannabis sativa HOM05D008721 ORTHO05D000482 2.9e-09 66.2 167 26.3
Ciclev10033715m.g Citrus clementina HOM05D007816 ORTHO05D000397 2.9e-09 66.2 137 29.2
CsaV3_5G014580 Cucumis sativus L. HOM05D010240 ORTHO05D010739 4.9e-09 65.5 175 28.6
TWI74G0229 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 4.9e-09 65.5 138 28.3
TWI81G0979 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 4.9e-09 65.5 138 28.3
CANSAT54G0826 Cannabis sativa HOM05D002262 ORTHO05D000482 6.4e-09 65.1 181 24.9
PGSC0003DMG400041208 Solanum tuberosum HOM05D000679 ORTHO05D000482 6.4e-09 65.1 130 33.1
Nitab4.5_0013791g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 8.4e-09 64.7 176 28.4
Nitab4.5_0006446g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.1e-08 64.3 176 28.4
TWI14G0228 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.1e-08 64.3 184 25.0
TWI38G0271 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.1e-08 64.3 182 25.8
TWI75G0282 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.1e-08 64.3 184 25.0
MELO3C030528.2 Cucumis melo HOM05D007907 ORTHO05D009079 1.4e-08 63.9 144 30.6
TWI59G0262 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.4e-08 63.9 184 25.0
TWI73G0375 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.4e-08 63.9 184 25.0
CANSAT78G0534 Cannabis sativa HOM05D002262 ORTHO05D000482 2.4e-08 63.2 130 32.3
MELO3C029011.2 Cucumis melo HOM05D007907 ORTHO05D009079 2.4e-08 63.2 142 29.6
Nitab4.5_0001131g0080 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.4e-08 63.2 180 27.8
Nitab4.5_0013466g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.4e-08 63.2 176 27.8
Oeu036698.1 Olea europaea HOM05D002749 ORTHO05D000708 3.2e-08 62.8 179 24.6
CsaV3_3G031520 Cucumis sativus L. HOM05D010240 ORTHO05D010739 4.2e-08 62.4 100 34.0
CANSAT25G1632 Cannabis sativa HOM05D008636 ORTHO05D000482 5.5e-08 62.0 148 29.1
Nitab4.5_0000839g0190 Nicotiana tabacum HOM05D002262 ORTHO05D000482 7.1e-08 61.6 176 29.0
Nitab4.5_0004040g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000482 7.1e-08 61.6 176 27.8
Nitab4.5_0009286g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.2e-07 60.8 176 27.8
Sed0023222 Sechium edule HOM05D007907 ORTHO05D009079 1.2e-07 60.8 185 24.3
CANSAT78G2078 Cannabis sativa HOM05D008636 ORTHO05D000482 1.6e-07 60.5 165 25.5
CAN.G1344.11 Capsicum annuum HOM05D000679 ORTHO05D000482 1.6e-07 60.5 171 25.7
MELO3C034303.2 Cucumis melo HOM05D007907 ORTHO05D009079 1.6e-07 60.5 175 27.4
Lsat_1_v5_gn_4_99201 Lactuca sativa HOM05D009439 ORTHO05D010827 2.1e-07 60.1 183 25.7
Nitab4.5_0002848g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.1e-07 60.1 176 27.3
Nitab4.5_0007069g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.1e-07 60.1 176 27.3
TWI74G0931 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.1e-07 60.1 100 30.0
CANSAT80G1435 Cannabis sativa HOM05D002262 ORTHO05D000482 2.7e-07 59.7 189 23.3
MBI12_g22855_MAGBIO Magnolia biondii HOM05D002823 ORTHO05D003025 2.7e-07 59.7 182 26.4
Oeu001559.1 Olea europaea HOM05D002749 ORTHO05D000708 2.7e-07 59.7 179 24.0
Nitab4.5_0004159g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.5e-07 59.3 174 27.0
Nitab4.5_0004770g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.5e-07 59.3 176 26.7
Nitab4.5_0002621g0080 Nicotiana tabacum HOM05D002262 ORTHO05D000482 4.6e-07 58.9 129 29.5
MELO3C032155.2 Cucumis melo HOM05D007907 ORTHO05D009079 6.0e-07 58.5 125 30.4
Nitab4.5_0004238g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 6.0e-07 58.5 158 25.9
Nitab4.5_0011458g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 6.0e-07 58.5 174 27.0
Ciclev10003531m.g Citrus clementina HOM05D002262 ORTHO05D000482 7.9e-07 58.2 137 28.5
Nitab4.5_0001473g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 7.9e-07 58.2 176 27.8
Nitab4.5_0001928g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000482 7.9e-07 58.2 176 25.0
Nitab4.5_0009026g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 7.9e-07 58.2 170 28.2
CANSAT01G1142 Cannabis sativa HOM05D009472 ORTHO05D000482 1.0e-06 57.8 191 25.7
CANSAT56G1481 Cannabis sativa HOM05D009472 ORTHO05D000482 1.0e-06 57.8 191 25.7
CANSAT21G1491 Cannabis sativa HOM05D001081 ORTHO05D001269 1.3e-06 57.4 138 32.6
Solyc06g008150.3 Solanum lycopersicum HOM05D005063 ORTHO05D000482 1.3e-06 57.4 175 24.6
Sopen06g002980 Solanum pennellii HOM05D005063 ORTHO05D000482 1.3e-06 57.4 175 24.6
MELO3C031312.2 Cucumis melo HOM05D007907 ORTHO05D009079 1.8e-06 57.0 135 28.9
Nitab4.5_0000721g0150 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.8e-06 57.0 158 25.9
Nitab4.5_0006355g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.8e-06 57.0 121 28.1
Nitab4.5_0011754g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.8e-06 57.0 176 23.9
CANSAT78G2134 Cannabis sativa HOM05D002262 ORTHO05D000482 2.3e-06 56.6 106 33.0
Nitab4.5_0001725g0070 Nicotiana tabacum HOM05D006812 ORTHO05D000482 2.3e-06 56.6 158 24.7
Nitab4.5_0002841g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.3e-06 56.6 176 25.6
Nitab4.5_0003619g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.3e-06 56.6 176 27.3
Nitab4.5_0005135g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 2.3e-06 56.6 173 24.3
Nitab4.5_0007528g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 2.3e-06 56.6 161 24.8
PSO801G0546 Papaver somniferum HOM05D000537 ORTHO05D000415 2.3e-06 56.6 191 22.5
Nitab4.5_0014940g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.0e-06 56.2 121 28.1
CANSAT35G1289 Cannabis sativa HOM05D008636 ORTHO05D000482 3.9e-06 55.8 132 32.6
TWI59G0381 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 3.9e-06 55.8 103 31.1
Nitab4.5_0001296g0150 Nicotiana tabacum HOM05D008646 ORTHO05D010739 5.1e-06 55.5 37 64.9
Nitab4.5_0002311g0100 Nicotiana tabacum HOM05D002262 ORTHO05D000482 5.1e-06 55.5 176 25.6
Nitab4.5_0003111g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.1e-06 55.5 173 25.4
CANSAT35G1168 Cannabis sativa HOM05D002262 ORTHO05D000482 6.7e-06 55.1 119 26.1
Nitab4.5_0001082g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 6.7e-06 55.1 176 25.6


User provided reference genes

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