Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003105g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.8e-86 322.8 194 100.0
Nitab4.5_0002373g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.0e-36 155.2 177 51.4
Nitab4.5_0000229g0050 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.0e-29 131.7 75 82.7
Nitab4.5_0007595g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.3e-27 125.9 82 75.6
Nitab4.5_0000002g0110 Nicotiana tabacum HOM05D002954 ORTHO05D003353 8.9e-25 117.9 72 80.6
Nitab4.5_0006167g0030 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.2e-22 109.4 73 74.0
Nitab4.5_0000255g0300 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.1e-22 109.0 73 68.5
Nitab4.5_0011441g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.6e-21 107.1 53 96.2
Sopen01g012120 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-20 104.0 74 66.2
Nitab4.5_0003410g0070 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.1e-20 102.1 75 64.0
Nitab4.5_0000416g0230 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.1e-19 100.9 74 66.2
Nitab4.5_0002430g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.5e-19 99.8 75 62.7
Nitab4.5_0003353g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.5e-19 99.8 54 83.3
Nitab4.5_0003879g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.1e-18 96.7 75 62.7
Nitab4.5_0002473g0090 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.6e-18 95.9 83 56.6
Nitab4.5_0001076g0100 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.1e-17 92.8 51 84.3
Nitab4.5_0003952g0070 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.1e-17 92.8 58 72.4
Nitab4.5_0007501g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.4e-16 89.0 92 51.1
Nitab4.5_0000817g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.8e-16 88.6 47 83.0
Peaxi162Scf00485g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 5.8e-16 88.6 72 66.7
PGSC0003DMG400011107 Solanum tuberosum HOM05D002954 ORTHO05D003353 1.9e-14 83.6 71 60.6
Nitab4.5_0000140g0170 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.6e-13 80.5 52 73.1
Lj1g0003177 Lotus japonicus HOM05D002954 ORTHO05D003353 5.6e-11 72.0 73 50.7
Phvul.011G159900 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 3.1e-09 66.2 62 51.6
Psat5g237440 Pisum sativum HOM05D002954 ORTHO05D003353 5.3e-09 65.5 68 47.1
Psat0s3286g0120 Pisum sativum HOM05D002954 ORTHO05D003353 9.0e-09 64.7 66 48.5
Peaxi162Scf00002g05111 Petunia axillaris HOM05D002954 ORTHO05D003353 2.6e-08 63.2 48 66.7
Phvul.003G046001 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 3.4e-08 62.8 58 51.7
Psat0s1021g0160 Pisum sativum HOM05D002954 ORTHO05D003353 5.8e-08 62.0 67 46.3
Psat0s1021g0200 Pisum sativum HOM05D002954 ORTHO05D003353 5.8e-08 62.0 67 46.3
Psat0s10455g0040 Pisum sativum HOM05D002954 ORTHO05D003353 5.8e-08 62.0 67 46.3
Psat0s9469g0040 Pisum sativum HOM05D002954 ORTHO05D003353 5.8e-08 62.0 67 46.3
Psat0s2772g0080 Pisum sativum HOM05D002954 ORTHO05D003353 9.9e-08 61.2 70 44.3
Phvul.003G092300 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.7e-07 60.5 66 45.5
VMungo1309G2137 Vigna mungo HOM05D000006 ORTHO05D000001 1.7e-07 60.5 76 44.7
Phvul.003G087300 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 2.2e-07 60.1 54 53.7
Psat0s1021g0240 Pisum sativum HOM05D002954 ORTHO05D003353 2.9e-07 59.7 67 44.8
Psat2g134520 Pisum sativum HOM05D002954 ORTHO05D003353 4.9e-07 58.9 54 51.9
Phvul.010G047600 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 6.4e-07 58.5 53 54.7
Phvul.008G149000 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.1e-06 57.8 70 40.0
arahy.Tifrunner.gnm1.ann1.R7YZCH Arachis hypogaea HOM05D002954 ORTHO05D003353 1.4e-06 57.4 66 40.9
arahy.Tifrunner.gnm1.ann1.NE3TTV Arachis hypogaea HOM05D002954 ORTHO05D003353 1.9e-06 57.0 70 41.4
Solyc01g010405.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 1.9e-06 57.0 78 44.9
Solyc11g044937.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 1.9e-06 57.0 52 59.6
Phvul.011G150700 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 3.2e-06 56.2 54 53.7
Lalb_Chr22g0361071 Lupinus albus HOM05D002954 ORTHO05D003353 4.2e-06 55.8 74 37.8
Psat3g100040 Pisum sativum HOM05D002954 ORTHO05D003353 4.2e-06 55.8 66 45.5
Psat5g178080 Pisum sativum HOM05D002954 ORTHO05D003353 4.2e-06 55.8 51 52.9
arahy.Tifrunner.gnm1.ann1.ZY1J0Y Arachis hypogaea HOM05D002954 ORTHO05D003353 5.4e-06 55.5 70 40.0
Nitab4.5_0001158g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.4e-06 55.5 29 86.2
Nitab4.5_0000386g0150 Nicotiana tabacum HOM05D002954 ORTHO05D003353 7.1e-06 55.1 54 50.0
arahy.Tifrunner.gnm1.ann1.QKP2RW Arachis hypogaea HOM05D002954 ORTHO05D003353 9.3e-06 54.7 49 53.1
VMungo0464G1442 Vigna mungo HOM05D005949 ORTHO05D006945 9.3e-06 54.7 74 40.5


User provided reference genes

Program Settings