Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003101g0130 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.2e-51 205.3 99 100.0
Solyc00g500037.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.2e-35 152.1 79 91.1
Solyc00g500046.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.2e-35 152.1 79 91.1
Solyc00g500081.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.2e-35 152.1 79 91.1
Solyc00g500128.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.2e-35 152.1 79 91.1
Solyc00g500198.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.2e-35 152.1 79 91.1
Solyc00g500327.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.2e-35 152.1 79 91.1
PGSC0003DMG400015060 Solanum tuberosum HOM05D000445 ORTHO05D000314 2.2e-35 152.1 79 91.1
DCAR_032529 Daucus carota HOM05D000445 ORTHO05D000314 4.9e-35 151.0 88 84.1
DCAR_032547 Daucus carota HOM05D000445 ORTHO05D000314 4.9e-35 151.0 88 84.1
HanXRQChr00c0585g0576241 Helianthus annuus HOM05D000445 ORTHO05D000314 6.3e-35 150.6 85 85.9
Hma1.2p1_0192F.1_g083680 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 6.3e-35 150.6 87 82.8
Hma1.2p1_0192F.1_g083690 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 6.3e-35 150.6 87 82.8
Hma1.2p1_4210F.1_g338452 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 6.3e-35 150.6 87 82.8
Solyc00g500148.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.8e-34 149.1 79 89.9
Lsat_1_v5_gn_0_15540 Lactuca sativa HOM05D000445 ORTHO05D000314 4.1e-34 147.9 81 86.4
Lsat_1_v5_gn_3_105620 Lactuca sativa HOM05D000445 ORTHO05D000314 4.1e-34 147.9 81 86.4
Lsat_1_v5_gn_3_13441 Lactuca sativa HOM05D000445 ORTHO05D000314 4.1e-34 147.9 81 86.4
Lsat_1_v5_gn_8_26500 Lactuca sativa HOM05D000445 ORTHO05D000314 4.1e-34 147.9 81 86.4
Lsat_1_v5_gn_9_18701 Lactuca sativa HOM05D000445 ORTHO05D000314 4.1e-34 147.9 81 86.4
Lsat_1_v5_gn_9_42020 Lactuca sativa HOM05D000445 ORTHO05D000314 4.1e-34 147.9 81 86.4
Nn070s42380 Nelumbo nucifera HOM05D000445 ORTHO05D000314 7.0e-34 147.1 80 87.5
arahy.Tifrunner.gnm1.ann1.R6YYA0 Arachis hypogaea HOM05D000445 ORTHO05D000314 9.2e-34 146.7 108 70.4
HanXRQChr11g0326541 Helianthus annuus HOM05D000445 ORTHO05D000314 9.2e-34 146.7 125 63.2
Lsat_1_v5_gn_7_82600 Lactuca sativa HOM05D000445 ORTHO05D000314 2.0e-33 145.6 91 80.2
TAR383G0379 Trochodendron aralioides HOM05D000445 ORTHO05D000314 2.0e-33 145.6 80 86.2
Nn020s41480 Nelumbo nucifera HOM05D000445 ORTHO05D000314 3.5e-33 144.8 80 86.2
HanXRQChr00c0165g0572211 Helianthus annuus HOM05D000445 ORTHO05D000314 4.5e-33 144.4 81 85.2
HanXRQChr00c0349g0573991 Helianthus annuus HOM05D000445 ORTHO05D000314 4.5e-33 144.4 81 85.2
HanXRQChr00c0394g0574511 Helianthus annuus HOM05D000445 ORTHO05D000314 4.5e-33 144.4 81 85.2
HanXRQChr00c0434g0574681 Helianthus annuus HOM05D000445 ORTHO05D000314 4.5e-33 144.4 81 85.2
HanXRQChr00c0451g0574821 Helianthus annuus HOM05D000445 ORTHO05D000314 4.5e-33 144.4 81 85.2
HanXRQChr00c0454g0574911 Helianthus annuus HOM05D000445 ORTHO05D000314 4.5e-33 144.4 81 85.2
HanXRQChr00c0524g0575411 Helianthus annuus HOM05D000445 ORTHO05D000314 4.5e-33 144.4 81 85.2
HanXRQChr01g0020161 Helianthus annuus HOM05D000445 ORTHO05D000314 4.5e-33 144.4 81 85.2
HanXRQChr04g0127431 Helianthus annuus HOM05D000445 ORTHO05D000314 4.5e-33 144.4 81 85.2
HanXRQChr05g0152501 Helianthus annuus HOM05D000445 ORTHO05D000314 4.5e-33 144.4 81 85.2
HanXRQChr10g0284471 Helianthus annuus HOM05D000445 ORTHO05D000314 4.5e-33 144.4 81 85.2
HanXRQChr11g0321171 Helianthus annuus HOM05D000445 ORTHO05D000314 4.5e-33 144.4 81 85.2
HanXRQChr11g0327091 Helianthus annuus HOM05D000445 ORTHO05D000314 4.5e-33 144.4 81 85.2
HanXRQChr12g0369911 Helianthus annuus HOM05D000445 ORTHO05D000314 4.5e-33 144.4 81 85.2
HanXRQChr13g0416601 Helianthus annuus HOM05D000445 ORTHO05D000314 4.5e-33 144.4 81 85.2
HanXRQCPg0580251 Helianthus annuus HOM05D000445 ORTHO05D000314 4.5e-33 144.4 81 85.2
HanXRQCPg0580471 Helianthus annuus HOM05D000445 ORTHO05D000314 4.5e-33 144.4 81 85.2
CsaV3_UNG209000 Cucumis sativus L. HOM05D000445 ORTHO05D000314 1.0e-32 143.3 80 85.0
PSO548G0004 Papaver somniferum HOM05D000445 ORTHO05D000314 1.3e-32 142.9 80 85.0
PSO548G0115 Papaver somniferum HOM05D000445 ORTHO05D000314 1.3e-32 142.9 80 85.0
Potri.013G143400 Populus trichocarpa HOM05D000445 ORTHO05D000314 1.3e-32 142.9 93 75.3
Lalb_Chr01g0014991 Lupinus albus HOM05D000445 ORTHO05D000314 1.7e-32 142.5 80 83.8
Lalb_Chr07g0191931 Lupinus albus HOM05D000445 ORTHO05D000314 1.7e-32 142.5 80 83.8
Nn2g12581 Nelumbo nucifera HOM05D000806 ORTHO05D002320 1.7e-32 142.5 90 77.8
HanXRQChr11g0336101 Helianthus annuus HOM05D000445 ORTHO05D000314 2.3e-32 142.1 81 84.0
HanXRQChr11g0336121 Helianthus annuus HOM05D000445 ORTHO05D000314 2.3e-32 142.1 81 84.0
HanXRQChr15g0474951 Helianthus annuus HOM05D000445 ORTHO05D000314 2.3e-32 142.1 81 84.0
RcHm_v2.0_CPg0501801 Rosa chinensis HOM05D000445 ORTHO05D000314 3.8e-32 141.4 80 85.0
RcHm_v2.0_CPg0502611 Rosa chinensis HOM05D000445 ORTHO05D000314 3.8e-32 141.4 80 85.0
SabraPtG0004600 Salix brachista HOM05D000445 ORTHO05D000314 8.6e-32 140.2 93 74.2
SabraPtG0006900 Salix brachista HOM05D000445 ORTHO05D000314 8.6e-32 140.2 93 74.2
Gohir.A04G039060 Gossypium hirsutum HOM05D000445 ORTHO05D000314 1.9e-31 139.0 80 83.8
Gohir.D01G101865 Gossypium hirsutum HOM05D000445 ORTHO05D000314 4.3e-31 137.9 80 82.5
Lj4g0020232 Lotus japonicus HOM05D000445 ORTHO05D000314 4.3e-31 137.9 81 80.2
Solyc04g024540.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 4.3e-31 137.9 79 82.3
Aqoxy169s001 Aquilegia oxysepala HOM05D000445 ORTHO05D000314 5.6e-31 137.5 80 81.2
arahy.Tifrunner.gnm1.ann1.QI67VD Arachis hypogaea HOM05D000445 ORTHO05D000314 5.6e-31 137.5 80 81.2
arahy.Tifrunner.gnm1.ann1.U896IL Arachis hypogaea HOM05D000445 ORTHO05D000314 5.6e-31 137.5 80 81.2
PGR111G0085 Punica granatum HOM05D000445 ORTHO05D000314 9.5e-31 136.7 80 81.2
PGR111G0100 Punica granatum HOM05D000445 ORTHO05D000314 9.5e-31 136.7 80 81.2
arahy.Tifrunner.gnm1.ann1.Z1U5RE Arachis hypogaea HOM05D000445 ORTHO05D000314 1.2e-30 136.3 80 80.0
Oeu012817.1 Olea europaea HOM05D000445 ORTHO05D000314 1.2e-30 136.3 76 84.2
LjContig00318g0022366 Lotus japonicus HOM05D000445 ORTHO05D000314 2.8e-30 135.2 81 79.0
LjContig00319g0026737 Lotus japonicus HOM05D000445 ORTHO05D000314 2.8e-30 135.2 81 79.0
ATR0258G003 Amborella trichopoda HOM05D000445 ORTHO05D000314 4.7e-30 134.4 80 82.5
CAN.G413.6 Capsicum annuum HOM05D000445 ORTHO05D000314 1.0e-29 133.3 71 88.7
HanXRQChr00c0533g0575561 Helianthus annuus HOM05D000445 ORTHO05D000314 1.8e-29 132.5 102 68.6
VMungo0942G0001 Vigna mungo HOM05D000445 ORTHO05D000314 3.0e-29 131.7 89 71.9
VMungo0976G0001 Vigna mungo HOM05D000445 ORTHO05D000314 3.0e-29 131.7 89 71.9
unitig_91.g26530 Utricularia gibba HOM05D000445 ORTHO05D000314 4.0e-29 131.3 81 80.2
arahy.Tifrunner.gnm1.ann1.BS87Z8 Arachis hypogaea HOM05D000445 ORTHO05D000314 8.9e-29 130.2 93 73.1
Sc05g0004090 Simmondsia chinensis HOM05D000445 ORTHO05D000314 8.9e-29 130.2 80 78.8
Sc25g0001980 Simmondsia chinensis HOM05D000445 ORTHO05D000314 8.9e-29 130.2 80 78.8
TPR.G25940 Trifolium pratense HOM05D000445 ORTHO05D000314 7.5e-28 127.1 108 64.8
Hund08796 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.9e-27 125.2 81 77.8
Hund10280 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.9e-27 125.2 81 77.8
Hund28591 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.9e-27 125.2 81 77.8
Hund28646 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.9e-27 125.2 81 77.8
Hund28772 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.9e-27 125.2 81 77.8
Hund29402 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.9e-27 125.2 81 77.8
Hund29423 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.9e-27 125.2 81 77.8
ATCG00860 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 3.7e-27 124.8 77 77.9
ATCG01280 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 3.7e-27 124.8 77 77.9
CARHR282560 Cardamine hirsuta HOM05D000445 ORTHO05D000314 3.7e-27 124.8 77 77.9
Solyc08g045620.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 6.4e-27 124.0 69 87.0
EL10As18g24166 Beta vulgaris HOM05D000445 ORTHO05D000314 8.3e-27 123.6 80 76.2
BraSC25t45893Z Brassica rapa HOM05D000445 ORTHO05D000314 8.3e-27 123.6 121 57.9
Solyc10g018980.3 Solanum lycopersicum HOM05D000445 ORTHO05D000314 8.3e-27 123.6 69 82.6
Lsat_1_v5_gn_7_67161 Lactuca sativa HOM05D000445 ORTHO05D000314 1.1e-26 123.2 76 80.3
Nitab4.5_0000223g0170 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.1e-26 123.2 72 80.6
C06p21350 Brassica napus HOM05D000445 ORTHO05D000314 5.4e-26 120.9 77 75.3
BolSC29t60491H Brassica oleracea HOM05D000445 ORTHO05D000314 5.4e-26 120.9 77 75.3
BolSC49t61128H Brassica oleracea HOM05D000445 ORTHO05D000314 5.4e-26 120.9 77 75.3
BraSC103t45415Z Brassica rapa HOM05D000445 ORTHO05D000314 5.4e-26 120.9 77 75.3
BraSC103t45439Z Brassica rapa HOM05D000445 ORTHO05D000314 5.4e-26 120.9 77 75.3
BraSC143t45643Z Brassica rapa HOM05D000445 ORTHO05D000314 5.4e-26 120.9 77 75.3
BraSC59t46524Z Brassica rapa HOM05D000445 ORTHO05D000314 5.4e-26 120.9 77 75.3
Gorai.002G166000 Gossypium raimondii HOM05D000445 ORTHO05D000314 5.4e-26 120.9 71 80.3
BraSC179t45786Z Brassica rapa HOM05D000445 ORTHO05D000314 7.0e-26 120.6 79 72.2
EL10Ac1g00652 Beta vulgaris HOM05D000445 ORTHO05D000314 9.2e-26 120.2 80 73.8
EL10Ac8g19269 Beta vulgaris HOM05D000445 ORTHO05D000314 1.6e-25 119.4 80 71.2
Peaxi162Scf00211g00218 Petunia axillaris HOM05D000445 ORTHO05D000314 1.6e-25 119.4 81 77.8
FAN08G3077 Fragaria x ananassa HOM05D000445 ORTHO05D000314 1.0e-24 116.7 68 82.4
Eucgr.J02700 Eucalyptus grandis HOM05D000445 ORTHO05D000314 3.0e-24 115.2 62 87.1
HanXRQChr00c0392g0574461 Helianthus annuus HOM05D000445 ORTHO05D000314 3.0e-24 115.2 71 77.5
Lalb_Chr13g0292601 Lupinus albus HOM05D000445 ORTHO05D000314 8.6e-24 113.6 66 80.3
Solyc01g017110.2 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.5e-23 112.1 65 80.0
Lalb_Chr12g0206591 Lupinus albus HOM05D000445 ORTHO05D000314 3.3e-23 111.7 62 85.5
Nn269s46007 Nelumbo nucifera HOM05D000445 ORTHO05D000314 3.3e-23 111.7 65 80.0
Gohir.A12G088950 Gossypium hirsutum HOM05D000445 ORTHO05D000314 2.8e-22 108.6 62 82.3
LjContig00489g0008652 Lotus japonicus HOM05D000445 ORTHO05D000314 3.6e-22 108.2 71 76.1
Ah.10g027230 Amaranthus hybridus HOM05D000445 ORTHO05D000314 6.8e-21 104.0 81 70.4
Ah.10g027290 Amaranthus hybridus HOM05D000445 ORTHO05D000314 6.8e-21 104.0 81 70.4
Ah.10g027420 Amaranthus hybridus HOM05D000445 ORTHO05D000314 6.8e-21 104.0 81 70.4
Ah.10g027670 Amaranthus hybridus HOM05D000445 ORTHO05D000314 6.8e-21 104.0 81 70.4
Ah.10g027730 Amaranthus hybridus HOM05D000445 ORTHO05D000314 6.8e-21 104.0 81 70.4
Peaxi162Scf00005g04915 Petunia axillaris HOM05D000729 ORTHO05D001063 9.8e-20 100.1 60 83.3
Eucgr.G01321 Eucalyptus grandis HOM05D000445 ORTHO05D000314 7.0e-18 94.0 51 86.3
Oeu058356.1 Olea europaea HOM05D000445 ORTHO05D000314 7.8e-17 90.5 55 76.4
Oeu022561.1 Olea europaea HOM05D000445 ORTHO05D000314 3.0e-16 88.6 83 56.6
Ah.10g029020 Amaranthus hybridus HOM05D000445 ORTHO05D000314 1.5e-15 86.3 68 69.1
Nitab4.5_0004573g0040 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.2e-14 83.2 52 78.8
Gorai.007G214200 Gossypium raimondii HOM05D000445 ORTHO05D000314 1.8e-13 79.3 45 82.2
Nitab4.5_0002093g0210 Nicotiana tabacum HOM05D000445 ORTHO05D000314 8.9e-13 77.0 40 90.0
Solyc09g031840.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 5.8e-12 74.3 38 92.1
C08p15300 Brassica napus HOM05D000216 ORTHO05D000314 1.3e-11 73.2 49 73.5
BolC8t49159H Brassica oleracea HOM05D000216 ORTHO05D000314 1.3e-11 73.2 49 73.5
Migut.D01405 Erythranthe guttata HOM05D000445 ORTHO05D000314 1.7e-11 72.8 40 85.0
HanXRQChr13g0418951 Helianthus annuus HOM05D000445 ORTHO05D000314 2.2e-11 72.4 40 85.0
Gohir.D10G110850 Gossypium hirsutum HOM05D000445 ORTHO05D000314 4.9e-11 71.2 51 66.7
Solyc05g047670.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 4.9e-11 71.2 36 88.9
Peaxi162Scf00134g01413 Petunia axillaris HOM05D011550 ORTHO05D015717 1.9e-10 69.3 36 88.9
arahy.Tifrunner.gnm1.ann1.9A3TMW Arachis hypogaea HOM05D000445 ORTHO05D000314 2.4e-10 68.9 40 80.0
Solyc04g050840.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 4.1e-10 68.2 37 86.5
Hund11510 Selenicereus undatus HOM05D000445 ORTHO05D000314 5.4e-10 67.8 43 79.1
FAN18G1965 Fragaria x ananassa HOM05D000445 ORTHO05D000314 7.1e-10 67.4 40 80.0
CiPaw.03G000800 Carya illinoinensis HOM05D000445 ORTHO05D000314 1.6e-09 66.2 47 63.8
Migut.M00451 Erythranthe guttata HOM05D000445 ORTHO05D000314 1.6e-09 66.2 40 82.5
Hund19326 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.1e-09 65.9 41 80.5
Hund26852 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.1e-09 65.9 41 80.5
Nitab4.5_0003415g0040 Nicotiana tabacum HOM05D000445 ORTHO05D000314 3.5e-09 65.1 40 77.5
Thhalv10001808m.g Eutrema salsugineum HOM05D000445 ORTHO05D000314 7.8e-09 63.9 40 75.0
Gorai.011G122200 Gossypium raimondii HOM05D000445 ORTHO05D000314 7.8e-09 63.9 52 59.6
BraSC138t45546Z Brassica rapa HOM05D000445 ORTHO05D000314 5.1e-08 61.2 37 75.7
Gohir.D02G149651 Gossypium hirsutum HOM05D000445 ORTHO05D000314 5.1e-08 61.2 36 77.8
HanXRQChr00c0448g0574801 Helianthus annuus HOM05D000445 ORTHO05D000314 1.5e-07 59.7 38 71.1
Gorai.005G167600 Gossypium raimondii HOM05D000445 ORTHO05D000314 4.3e-07 58.2 36 75.0
Migut.D01372 Erythranthe guttata HOM05D000445 ORTHO05D000314 5.6e-07 57.8 27 92.6
Migut.D01323 Erythranthe guttata HOM05D000445 ORTHO05D000314 2.1e-06 55.8 60 53.3
HanXRQChr00c0925g0577921 Helianthus annuus HOM05D000445 ORTHO05D000314 6.2e-06 54.3 41 68.3
Nitab4.5_0004376g0100 Nicotiana tabacum HOM05D000445 ORTHO05D000314 6.2e-06 54.3 36 75.0


User provided reference genes

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